Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 RNA5SP368-201ENST00000364298 116 ntBASIC-1.02□□□□□ -2.57
VPS33AQ96AX1 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.02□□□□□ -2.57
VPS33AQ96AX1 MIR507-201ENST00000385234 94 ntBASIC-1.02□□□□□ -2.57
VPS33AQ96AX1 MIR527-201ENST00000385244 85 ntBASIC-1.02□□□□□ -2.57
VPS33AQ96AX1 RPL35AP4-201ENST00000412007 102 ntBASIC-1.02□□□□□ -2.57
VPS33AQ96AX1 AC090616.4-201ENST00000448026 115 ntBASIC-1.02□□□□□ -2.57
VPS33AQ96AX1 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.02□□□□□ -2.57
VPS33AQ96AX1 RNU6-330P-201ENST00000363015 107 ntBASIC-1.03□□□□□ -2.57
VPS33AQ96AX1 AL035461.1-201ENST00000421490 332 ntBASIC-1.03□□□□□ -2.57
VPS33AQ96AX1 AL353691.2-201ENST00000443795 59 ntBASIC-1.03□□□□□ -2.57
VPS33AQ96AX1 RNU6-478P-201ENST00000363904 110 ntBASIC-1.04□□□□□ -2.58
VPS33AQ96AX1 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.04□□□□□ -2.58
VPS33AQ96AX1 MIR1236-201ENST00000408340 102 ntBASIC-1.04□□□□□ -2.58
VPS33AQ96AX1 U7.3-201ENST00000616123 62 ntBASIC-1.04□□□□□ -2.58
VPS33AQ96AX1 RNU6-164P-201ENST00000364604 103 ntBASIC-1.05□□□□□ -2.58
VPS33AQ96AX1 SNORD116-21-201ENST00000384507 92 ntBASIC-1.05□□□□□ -2.58
VPS33AQ96AX1 AL021921.1-201ENST00000442774 93 ntBASIC-1.05□□□□□ -2.58
VPS33AQ96AX1 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.05□□□□□ -2.58
VPS33AQ96AX1 MIR5683-201ENST00000636514 76 ntBASIC-1.05□□□□□ -2.58
VPS33AQ96AX1 SNORD116-10-201ENST00000363791 102 ntBASIC-1.06□□□□□ -2.58
VPS33AQ96AX1 RNU4-61P-201ENST00000411243 107 ntBASIC-1.06□□□□□ -2.58
VPS33AQ96AX1 Y_RNA.703-201ENST00000516846 111 ntBASIC-1.06□□□□□ -2.58
VPS33AQ96AX1 RNU6-645P-201ENST00000364649 106 ntBASIC-1.07□□□□□ -2.58
VPS33AQ96AX1 RNU6-106P-201ENST00000384405 107 ntBASIC-1.07□□□□□ -2.58
VPS33AQ96AX1 SNORA19-201ENST00000384737 128 ntBASIC-1.07□□□□□ -2.58
VPS33AQ96AX1 MIR520D-201ENST00000385002 87 ntBASIC-1.07□□□□□ -2.58
VPS33AQ96AX1 RNU6-554P-201ENST00000410466 106 ntBASIC-1.07□□□□□ -2.58
VPS33AQ96AX1 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.07□□□□□ -2.58
VPS33AQ96AX1 AL450471.1-201ENST00000447509 127 ntBASIC-1.07□□□□□ -2.58
VPS33AQ96AX1 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.07□□□□□ -2.58
VPS33AQ96AX1 RNU6-752P-201ENST00000516376 102 ntBASIC-1.07□□□□□ -2.58
VPS33AQ96AX1 MIR6129-201ENST00000616087 109 ntBASIC-1.07□□□□□ -2.58
VPS33AQ96AX1 RNU6-624P-201ENST00000363411 107 ntBASIC-1.08□□□□□ -2.58
VPS33AQ96AX1 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.08□□□□□ -2.58
VPS33AQ96AX1 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.08□□□□□ -2.58
VPS33AQ96AX1 RNU6-10P-201ENST00000384036 107 ntBASIC-1.08□□□□□ -2.58
VPS33AQ96AX1 RNU6-209P-201ENST00000384118 107 ntBASIC-1.08□□□□□ -2.58
VPS33AQ96AX1 RNU6-576P-201ENST00000390854 102 ntBASIC-1.08□□□□□ -2.58
VPS33AQ96AX1 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.08□□□□□ -2.58
VPS33AQ96AX1 RNU6-706P-201ENST00000517229 104 ntBASIC-1.08□□□□□ -2.58
VPS33AQ96AX1 RNA5SP192-201ENST00000364404 120 ntBASIC-1.09□□□□□ -2.58
VPS33AQ96AX1 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.09□□□□□ -2.58
VPS33AQ96AX1 RNU6-608P-201ENST00000383927 104 ntBASIC-1.09□□□□□ -2.58
VPS33AQ96AX1 RNU6-982P-201ENST00000516216 102 ntBASIC-1.09□□□□□ -2.58
VPS33AQ96AX1 RNU7-174P-201ENST00000516248 59 ntBASIC-1.09□□□□□ -2.58
VPS33AQ96AX1 MIR5591-201ENST00000578248 65 ntBASIC-1.09□□□□□ -2.58
VPS33AQ96AX1 MIR4520-1-201ENST00000582609 70 ntBASIC-1.09□□□□□ -2.58
VPS33AQ96AX1 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.1□□□□□ -2.59
VPS33AQ96AX1 RNU6-226P-201ENST00000363778 107 ntBASIC-1.1□□□□□ -2.59
VPS33AQ96AX1 RNU6-598P-201ENST00000364017 105 ntBASIC-1.1□□□□□ -2.59
VPS33AQ96AX1 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.1□□□□□ -2.59
VPS33AQ96AX1 RNU6-497P-201ENST00000365316 104 ntBASIC-1.1□□□□□ -2.59
VPS33AQ96AX1 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.1□□□□□ -2.59
VPS33AQ96AX1 SNORD77.2-201ENST00000391045 68 ntBASIC-1.1□□□□□ -2.59
VPS33AQ96AX1 RNU6-587P-201ENST00000391282 106 ntBASIC-1.1□□□□□ -2.59
VPS33AQ96AX1 SNORD95.1-201ENST00000364099 68 ntBASIC-1.11□□□□□ -2.59
VPS33AQ96AX1 RNU6-704P-201ENST00000364162 103 ntBASIC-1.11□□□□□ -2.59
VPS33AQ96AX1 RNU6-458P-201ENST00000384179 107 ntBASIC-1.11□□□□□ -2.59
VPS33AQ96AX1 RNU6-168P-201ENST00000516189 101 ntBASIC-1.11□□□□□ -2.59
VPS33AQ96AX1 RNU6-807P-201ENST00000516805 107 ntBASIC-1.11□□□□□ -2.59
VPS33AQ96AX1 AC138207.3-201ENST00000585289 166 ntBASIC-1.11□□□□□ -2.59
VPS33AQ96AX1 U6.58-201ENST00000613107 107 ntBASIC-1.11□□□□□ -2.59
VPS33AQ96AX1 U4.4-201ENST00000620626 117 ntBASIC-1.11□□□□□ -2.59
VPS33AQ96AX1 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.12□□□□□ -2.59
VPS33AQ96AX1 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.12□□□□□ -2.59
VPS33AQ96AX1 RNU6-79P-201ENST00000362511 107 ntBASIC-1.13□□□□□ -2.59
VPS33AQ96AX1 RNU6-633P-201ENST00000362612 103 ntBASIC-1.13□□□□□ -2.59
VPS33AQ96AX1 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.13□□□□□ -2.59
VPS33AQ96AX1 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.13□□□□□ -2.59
VPS33AQ96AX1 MIR519C-201ENST00000385053 87 ntBASIC-1.13□□□□□ -2.59
VPS33AQ96AX1 HLA-S-202ENST00000425174 53 ntBASIC-1.13□□□□□ -2.59
VPS33AQ96AX1 RNU6-267P-201ENST00000516714 103 ntBASIC-1.13□□□□□ -2.59
VPS33AQ96AX1 MIR3133-201ENST00000583157 78 ntBASIC-1.13□□□□□ -2.59
VPS33AQ96AX1 RNA5SP86-201ENST00000390869 98 ntBASIC-1.14□□□□□ -2.59
VPS33AQ96AX1 RNU6-630P-201ENST00000391258 106 ntBASIC-1.14□□□□□ -2.59
VPS33AQ96AX1 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.14□□□□□ -2.59
VPS33AQ96AX1 MTATP8P2-201ENST00000435212 202 ntBASIC-1.14□□□□□ -2.59
VPS33AQ96AX1 MIR3671-201ENST00000580455 88 ntBASIC-1.14□□□□□ -2.59
VPS33AQ96AX1 Y_RNA.68-201ENST00000362881 102 ntBASIC-1.15□□□□□ -2.59
VPS33AQ96AX1 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.15□□□□□ -2.59
VPS33AQ96AX1 RNU6-219P-201ENST00000364728 107 ntBASIC-1.15□□□□□ -2.59
VPS33AQ96AX1 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.15□□□□□ -2.59
VPS33AQ96AX1 MIR1302-5-201ENST00000408164 150 ntBASIC-1.15□□□□□ -2.59
VPS33AQ96AX1 AC074348.1-201ENST00000426503 132 ntBASIC-1.15□□□□□ -2.59
VPS33AQ96AX1 SNORD57-201ENST00000448188 72 ntBASIC-1.15□□□□□ -2.59
VPS33AQ96AX1 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.15□□□□□ -2.59
VPS33AQ96AX1 MIR4770-201ENST00000579149 58 ntBASIC-1.15□□□□□ -2.59
VPS33AQ96AX1 MIR3165-201ENST00000579874 75 ntBASIC-1.15□□□□□ -2.59
VPS33AQ96AX1 MIR4490-201ENST00000582647 84 ntBASIC-1.15□□□□□ -2.59
VPS33AQ96AX1 U2.18-201ENST00000622185 84 ntBASIC-1.15□□□□□ -2.59
VPS33AQ96AX1 RNU6-681P-201ENST00000364012 104 ntBASIC-1.16□□□□□ -2.6
VPS33AQ96AX1 RNU6-696P-201ENST00000390834 107 ntBASIC-1.16□□□□□ -2.6
VPS33AQ96AX1 RNU6-258P-201ENST00000390884 101 ntBASIC-1.16□□□□□ -2.6
VPS33AQ96AX1 MIR548Q-201ENST00000408404 100 ntBASIC-1.16□□□□□ -2.6
VPS33AQ96AX1 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.16□□□□□ -2.6
VPS33AQ96AX1 MIR3668-201ENST00000582138 75 ntBASIC-1.16□□□□□ -2.6
VPS33AQ96AX1 MIR4668-201ENST00000582284 70 ntBASIC-1.16□□□□□ -2.6
VPS33AQ96AX1 MIR548C-201ENST00000384815 97 ntBASIC-1.17□□□□□ -2.6
VPS33AQ96AX1 RNU6-604P-201ENST00000390917 100 ntBASIC-1.17□□□□□ -2.6
VPS33AQ96AX1 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.17□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 166.2 ms