Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 RNA5SP26-201ENST00000362406 119 ntBASIC-1.73□□□□□ -2.69
PTP4A1Q93096 MIR889-201ENST00000401280 79 ntBASIC-1.73□□□□□ -2.69
PTP4A1Q93096 SNORA19.1-201ENST00000410656 129 ntBASIC-1.73□□□□□ -2.69
PTP4A1Q93096 MIR521-2-201ENST00000384818 87 ntBASIC-1.75□□□□□ -2.69
PTP4A1Q93096 snosnR66.1-201ENST00000391095 99 ntBASIC-1.75□□□□□ -2.69
PTP4A1Q93096 AL450471.1-201ENST00000447509 127 ntBASIC-1.75□□□□□ -2.69
PTP4A1Q93096 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.75□□□□□ -2.69
PTP4A1Q93096 MIR4320-201ENST00000636981 65 ntBASIC-1.75□□□□□ -2.69
PTP4A1Q93096 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.76□□□□□ -2.69
PTP4A1Q93096 RNU6-681P-201ENST00000364012 104 ntBASIC-1.76□□□□□ -2.69
PTP4A1Q93096 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.76□□□□□ -2.69
PTP4A1Q93096 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.76□□□□□ -2.69
PTP4A1Q93096 RNU4-61P-201ENST00000411243 107 ntBASIC-1.76□□□□□ -2.69
PTP4A1Q93096 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.76□□□□□ -2.69
PTP4A1Q93096 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.76□□□□□ -2.69
PTP4A1Q93096 RNU2-51P-201ENST00000410708 197 ntBASIC-1.77□□□□□ -2.69
PTP4A1Q93096 AC091912.2-201ENST00000624798 167 ntBASIC-1.77□□□□□ -2.69
PTP4A1Q93096 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.78□□□□□ -2.69
PTP4A1Q93096 RNU7-61P-201ENST00000515897 61 ntBASIC-1.78□□□□□ -2.69
PTP4A1Q93096 RNU7-154P-201ENST00000516194 62 ntBASIC-1.78□□□□□ -2.69
PTP4A1Q93096 SNORD115-22-201ENST00000364456 82 ntBASIC-1.79□□□□□ -2.7
PTP4A1Q93096 RNU6-164P-201ENST00000364604 103 ntBASIC-1.79□□□□□ -2.7
PTP4A1Q93096 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.79□□□□□ -2.7
PTP4A1Q93096 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.79□□□□□ -2.7
PTP4A1Q93096 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.8□□□□□ -2.7
PTP4A1Q93096 MIR590-201ENST00000385008 97 ntBASIC-1.81□□□□□ -2.7
PTP4A1Q93096 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.81□□□□□ -2.7
PTP4A1Q93096 MIR4520-1-201ENST00000582609 70 ntBASIC-1.81□□□□□ -2.7
PTP4A1Q93096 MIR6129-201ENST00000616087 109 ntBASIC-1.82□□□□□ -2.7
PTP4A1Q93096 RNA5SP331-201ENST00000364986 107 ntBASIC-1.83□□□□□ -2.7
PTP4A1Q93096 Y_RNA.703-201ENST00000516846 111 ntBASIC-1.83□□□□□ -2.7
PTP4A1Q93096 AL627230.5-201ENST00000619807 58 ntBASIC-1.83□□□□□ -2.7
PTP4A1Q93096 MIR6739-201ENST00000622461 75 ntBASIC-1.83□□□□□ -2.7
PTP4A1Q93096 SNX3P1X-201ENST00000414887 175 ntBASIC-1.84□□□□□ -2.7
PTP4A1Q93096 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.85□□□□□ -2.71
PTP4A1Q93096 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.85□□□□□ -2.71
PTP4A1Q93096 MIR6874-201ENST00000635894 71 ntBASIC-1.85□□□□□ -2.71
PTP4A1Q93096 AC008267.6-201ENST00000441664 139 ntBASIC-1.86□□□□□ -2.71
PTP4A1Q93096 AL021921.1-201ENST00000442774 93 ntBASIC-1.86□□□□□ -2.71
PTP4A1Q93096 AL353691.2-201ENST00000443795 59 ntBASIC-1.86□□□□□ -2.71
PTP4A1Q93096 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.86□□□□□ -2.71
PTP4A1Q93096 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.86□□□□□ -2.71
PTP4A1Q93096 U7.3-201ENST00000616123 62 ntBASIC-1.87□□□□□ -2.71
PTP4A1Q93096 RNU6-704P-201ENST00000364162 103 ntBASIC-1.88□□□□□ -2.71
PTP4A1Q93096 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.88□□□□□ -2.71
PTP4A1Q93096 RNA5SP86-201ENST00000390869 98 ntBASIC-1.88□□□□□ -2.71
PTP4A1Q93096 RNU6-518P-201ENST00000516056 96 ntBASIC-1.88□□□□□ -2.71
PTP4A1Q93096 SNORD115-37-201ENST00000363768 82 ntBASIC-1.89□□□□□ -2.71
PTP4A1Q93096 RNU6-226P-201ENST00000363778 107 ntBASIC-1.89□□□□□ -2.71
PTP4A1Q93096 RNU6-340P-201ENST00000364005 107 ntBASIC-1.89□□□□□ -2.71
PTP4A1Q93096 MIR519C-201ENST00000385053 87 ntBASIC-1.89□□□□□ -2.71
PTP4A1Q93096 SNORD77.2-201ENST00000391045 68 ntBASIC-1.89□□□□□ -2.71
PTP4A1Q93096 RNU6-162P-201ENST00000516228 103 ntBASIC-1.89□□□□□ -2.71
PTP4A1Q93096 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.9□□□□□ -2.71
PTP4A1Q93096 AL078595.1-201ENST00000404458 226 ntBASIC-1.91□□□□□ -2.72
PTP4A1Q93096 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.91□□□□□ -2.72
PTP4A1Q93096 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.91□□□□□ -2.72
PTP4A1Q93096 MIR198-201ENST00000637333 62 ntBASIC-1.91□□□□□ -2.72
PTP4A1Q93096 RNU6-209P-201ENST00000384118 107 ntBASIC-1.92□□□□□ -2.72
PTP4A1Q93096 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.92□□□□□ -2.72
PTP4A1Q93096 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.92□□□□□ -2.72
PTP4A1Q93096 MIR519A2-201ENST00000384990 87 ntBASIC-1.92□□□□□ -2.72
PTP4A1Q93096 RNU7-153P-201ENST00000516455 62 ntBASIC-1.92□□□□□ -2.72
PTP4A1Q93096 MIR3133-201ENST00000583157 78 ntBASIC-1.92□□□□□ -2.72
PTP4A1Q93096 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.93□□□□□ -2.72
PTP4A1Q93096 MIR507-201ENST00000385234 94 ntBASIC-1.93□□□□□ -2.72
PTP4A1Q93096 RNU6-554P-201ENST00000410466 106 ntBASIC-1.93□□□□□ -2.72
PTP4A1Q93096 AP002795.1-201ENST00000534879 84 ntBASIC-1.93□□□□□ -2.72
PTP4A1Q93096 RNU6-774P-201ENST00000363238 107 ntBASIC-1.94□□□□□ -2.72
PTP4A1Q93096 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.94□□□□□ -2.72
PTP4A1Q93096 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.94□□□□□ -2.72
PTP4A1Q93096 RNU6-106P-201ENST00000384405 107 ntBASIC-1.94□□□□□ -2.72
PTP4A1Q93096 RNA5SP461-201ENST00000516451 104 ntBASIC-1.94□□□□□ -2.72
PTP4A1Q93096 MIR2052-201ENST00000636055 55 ntBASIC-1.94□□□□□ -2.72
PTP4A1Q93096 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.94□□□□□ -2.72
PTP4A1Q93096 RNU6-959P-201ENST00000384671 107 ntBASIC-1.95□□□□□ -2.72
PTP4A1Q93096 RNU6-109P-201ENST00000516364 107 ntBASIC-1.95□□□□□ -2.72
PTP4A1Q93096 RNU6-184P-201ENST00000516514 107 ntBASIC-1.95□□□□□ -2.72
PTP4A1Q93096 SNORD19-201ENST00000391191 68 ntBASIC-1.96□□□□□ -2.72
PTP4A1Q93096 MIR548H1-201ENST00000408610 102 ntBASIC-1.96□□□□□ -2.72
PTP4A1Q93096 RNA5SP180-201ENST00000516181 101 ntBASIC-1.96□□□□□ -2.72
PTP4A1Q93096 RNU6-168P-201ENST00000516189 101 ntBASIC-1.96□□□□□ -2.72
PTP4A1Q93096 AC090616.4-201ENST00000448026 115 ntBASIC-1.97□□□□□ -2.72
PTP4A1Q93096 RNU6-732P-201ENST00000516033 103 ntBASIC-1.97□□□□□ -2.72
PTP4A1Q93096 RNU6-766P-201ENST00000362478 107 ntBASIC-1.98□□□□□ -2.73
PTP4A1Q93096 SNORD115-27-201ENST00000364430 82 ntBASIC-1.98□□□□□ -2.73
PTP4A1Q93096 RNU6-400P-201ENST00000391173 106 ntBASIC-1.98□□□□□ -2.73
PTP4A1Q93096 AL035461.1-201ENST00000421490 332 ntBASIC-1.98□□□□□ -2.73
PTP4A1Q93096 RNU6-158P-201ENST00000517104 100 ntBASIC-1.98□□□□□ -2.73
PTP4A1Q93096 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.98□□□□□ -2.73
PTP4A1Q93096 MIR4490-201ENST00000582647 84 ntBASIC-1.98□□□□□ -2.73
PTP4A1Q93096 MIR5683-201ENST00000636514 76 ntBASIC-1.98□□□□□ -2.73
PTP4A1Q93096 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.99□□□□□ -2.73
PTP4A1Q93096 MTATP8P2-201ENST00000435212 202 ntBASIC-1.99□□□□□ -2.73
PTP4A1Q93096 RNU6-834P-201ENST00000362367 110 ntBASIC-2□□□□□ -2.73
PTP4A1Q93096 RNU6-1056P-201ENST00000383996 107 ntBASIC-2□□□□□ -2.73
PTP4A1Q93096 RNU6-79P-201ENST00000362511 107 ntBASIC-2.01□□□□□ -2.73
PTP4A1Q93096 MIR601-201ENST00000385256 79 ntBASIC-2.01□□□□□ -2.73
PTP4A1Q93096 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-2.01□□□□□ -2.73
PTP4A1Q93096 RNU6-807P-201ENST00000516805 107 ntBASIC-2.01□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 192 ms