Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.47□□□□□ -2.48
SHROOM3Q8TF72 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.47□□□□□ -2.48
SHROOM3Q8TF72 SNORD20-201ENST00000384550 80 ntBASIC-0.47□□□□□ -2.48
SHROOM3Q8TF72 MIR1255B2-201ENST00000408618 67 ntBASIC-0.47□□□□□ -2.48
SHROOM3Q8TF72 AP000533.3-201ENST00000447704 118 ntBASIC-0.47□□□□□ -2.48
SHROOM3Q8TF72 AC021146.6-201ENST00000514659 117 ntBASIC-0.47□□□□□ -2.48
SHROOM3Q8TF72 SNORD77.2-201ENST00000391045 68 ntBASIC-0.48□□□□□ -2.49
SHROOM3Q8TF72 MIR1207-201ENST00000408249 87 ntBASIC-0.48□□□□□ -2.49
SHROOM3Q8TF72 RNU6-158P-201ENST00000517104 100 ntBASIC-0.48□□□□□ -2.49
SHROOM3Q8TF72 RNU6-973P-201ENST00000364690 107 ntBASIC-0.48□□□□□ -2.49
SHROOM3Q8TF72 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.48□□□□□ -2.49
SHROOM3Q8TF72 RNU7-153P-201ENST00000516455 62 ntBASIC-0.48□□□□□ -2.49
SHROOM3Q8TF72 AC140658.3-201ENST00000567603 271 ntBASIC-0.48□□□□□ -2.49
SHROOM3Q8TF72 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.48□□□□□ -2.49
SHROOM3Q8TF72 MIR196A1-201ENST00000388006 70 ntBASIC-0.49□□□□□ -2.49
SHROOM3Q8TF72 CYP3A54P-201ENST00000566950 75 ntBASIC-0.49□□□□□ -2.49
SHROOM3Q8TF72 SNORA2.1-201ENST00000363089 137 ntBASIC-0.5□□□□□ -2.49
SHROOM3Q8TF72 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.5□□□□□ -2.49
SHROOM3Q8TF72 RNY4P30-201ENST00000410216 95 ntBASIC-0.5□□□□□ -2.49
SHROOM3Q8TF72 RNU6-752P-201ENST00000516376 102 ntBASIC-0.5□□□□□ -2.49
SHROOM3Q8TF72 RNU6-919P-201ENST00000516731 104 ntBASIC-0.5□□□□□ -2.49
SHROOM3Q8TF72 RNU6-834P-201ENST00000362367 110 ntBASIC-0.5□□□□□ -2.49
SHROOM3Q8TF72 SNORD90-201ENST00000391145 111 ntBASIC-0.5□□□□□ -2.49
SHROOM3Q8TF72 Y_RNA.607-201ENST00000410597 98 ntBASIC-0.5□□□□□ -2.49
SHROOM3Q8TF72 RNU6-592P-201ENST00000411333 103 ntBASIC-0.5□□□□□ -2.49
SHROOM3Q8TF72 RNU7-154P-201ENST00000516194 62 ntBASIC-0.5□□□□□ -2.49
SHROOM3Q8TF72 U6.96-201ENST00000636425 70 ntBASIC-0.5□□□□□ -2.49
SHROOM3Q8TF72 RNU6-340P-201ENST00000364005 107 ntBASIC-0.51□□□□□ -2.49
SHROOM3Q8TF72 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.51□□□□□ -2.49
SHROOM3Q8TF72 RNY4P18-201ENST00000391107 89 ntBASIC-0.51□□□□□ -2.49
SHROOM3Q8TF72 RNU6-721P-201ENST00000410155 105 ntBASIC-0.51□□□□□ -2.49
SHROOM3Q8TF72 AC022137.1-201ENST00000483735 151 ntBASIC-0.51□□□□□ -2.49
SHROOM3Q8TF72 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.51□□□□□ -2.49
SHROOM3Q8TF72 RNU6-313P-201ENST00000516317 112 ntBASIC-0.51□□□□□ -2.49
SHROOM3Q8TF72 MIR518B-201ENST00000385127 83 ntBASIC-0.52□□□□□ -2.49
SHROOM3Q8TF72 AL603908.1-201ENST00000406098 201 ntBASIC-0.52□□□□□ -2.49
SHROOM3Q8TF72 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.52□□□□□ -2.49
SHROOM3Q8TF72 RNU6-881P-201ENST00000516813 102 ntBASIC-0.52□□□□□ -2.49
SHROOM3Q8TF72 RNA5SP169-201ENST00000517268 117 ntBASIC-0.52□□□□□ -2.49
SHROOM3Q8TF72 RNU6-633P-201ENST00000362612 103 ntBASIC-0.53□□□□□ -2.49
SHROOM3Q8TF72 SNORD113-1-201ENST00000365321 69 ntBASIC-0.53□□□□□ -2.49
SHROOM3Q8TF72 MIR521-2-201ENST00000384818 87 ntBASIC-0.53□□□□□ -2.49
SHROOM3Q8TF72 MIR124-2-201ENST00000385081 109 ntBASIC-0.53□□□□□ -2.49
SHROOM3Q8TF72 RNU6-267P-201ENST00000516714 103 ntBASIC-0.53□□□□□ -2.49
SHROOM3Q8TF72 MIR3675-201ENST00000583661 73 ntBASIC-0.53□□□□□ -2.49
SHROOM3Q8TF72 MALAT1.1-201ENST00000618249 95 ntBASIC-0.53□□□□□ -2.49
SHROOM3Q8TF72 RNU6-147P-201ENST00000383983 107 ntBASIC-0.54□□□□□ -2.5
SHROOM3Q8TF72 MIR517B-201ENST00000385102 67 ntBASIC-0.54□□□□□ -2.5
SHROOM3Q8TF72 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.54□□□□□ -2.5
SHROOM3Q8TF72 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.54□□□□□ -2.5
SHROOM3Q8TF72 RNU6-44P-201ENST00000384045 107 ntBASIC-0.54□□□□□ -2.5
SHROOM3Q8TF72 MIR519A2-201ENST00000384990 87 ntBASIC-0.54□□□□□ -2.5
SHROOM3Q8TF72 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.54□□□□□ -2.5
SHROOM3Q8TF72 AL445584.3-201ENST00000617173 78 ntBASIC-0.54□□□□□ -2.5
SHROOM3Q8TF72 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.55□□□□□ -2.5
SHROOM3Q8TF72 RNY1P7-201ENST00000384743 110 ntBASIC-0.55□□□□□ -2.5
SHROOM3Q8TF72 AL450471.1-201ENST00000447509 127 ntBASIC-0.56□□□□□ -2.5
SHROOM3Q8TF72 U6.81-201ENST00000612550 106 ntBASIC-0.56□□□□□ -2.5
SHROOM3Q8TF72 SNORA8.1-201ENST00000384250 140 ntBASIC-0.56□□□□□ -2.5
SHROOM3Q8TF72 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.56□□□□□ -2.5
SHROOM3Q8TF72 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.56□□□□□ -2.5
SHROOM3Q8TF72 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.56□□□□□ -2.5
SHROOM3Q8TF72 MIR4668-201ENST00000582284 70 ntBASIC-0.56□□□□□ -2.5
SHROOM3Q8TF72 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.57□□□□□ -2.5
SHROOM3Q8TF72 RNA5SP89-201ENST00000410300 108 ntBASIC-0.57□□□□□ -2.5
SHROOM3Q8TF72 RNU7-88P-201ENST00000458752 63 ntBASIC-0.57□□□□□ -2.5
SHROOM3Q8TF72 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.57□□□□□ -2.5
SHROOM3Q8TF72 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.57□□□□□ -2.5
SHROOM3Q8TF72 SNORA62.4-201ENST00000365504 151 ntBASIC-0.57□□□□□ -2.5
SHROOM3Q8TF72 RNU6-406P-201ENST00000516470 107 ntBASIC-0.57□□□□□ -2.5
SHROOM3Q8TF72 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.57□□□□□ -2.5
SHROOM3Q8TF72 RNU6-303P-201ENST00000517091 106 ntBASIC-0.57□□□□□ -2.5
SHROOM3Q8TF72 RNU6-640P-201ENST00000363693 105 ntBASIC-0.58□□□□□ -2.5
SHROOM3Q8TF72 SNORD115-22-201ENST00000364456 82 ntBASIC-0.58□□□□□ -2.5
SHROOM3Q8TF72 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.58□□□□□ -2.5
SHROOM3Q8TF72 RNU6-32P-201ENST00000383948 107 ntBASIC-0.58□□□□□ -2.5
SHROOM3Q8TF72 RNU6-675P-201ENST00000384236 104 ntBASIC-0.58□□□□□ -2.5
SHROOM3Q8TF72 RNU6-13P-201ENST00000384248 107 ntBASIC-0.58□□□□□ -2.5
SHROOM3Q8TF72 RNU6-12P-201ENST00000384604 107 ntBASIC-0.58□□□□□ -2.5
SHROOM3Q8TF72 RNU6-41P-201ENST00000384741 107 ntBASIC-0.58□□□□□ -2.5
SHROOM3Q8TF72 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.58□□□□□ -2.5
SHROOM3Q8TF72 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.58□□□□□ -2.5
SHROOM3Q8TF72 U4.2-201ENST00000618561 85 ntBASIC-0.58□□□□□ -2.5
SHROOM3Q8TF72 SCARNA18B-201ENST00000458806 135 ntBASIC-0.59□□□□□ -2.5
SHROOM3Q8TF72 RNU6-844P-201ENST00000517175 102 ntBASIC-0.59□□□□□ -2.5
SHROOM3Q8TF72 MIR3681-201ENST00000580089 72 ntBASIC-0.59□□□□□ -2.5
SHROOM3Q8TF72 AL353803.5-201ENST00000599815 141 ntBASIC-0.59□□□□□ -2.5
SHROOM3Q8TF72 RNU6-979P-201ENST00000383896 107 ntBASIC-0.59□□□□□ -2.5
SHROOM3Q8TF72 SNORD83B-201ENST00000386745 93 ntBASIC-0.59□□□□□ -2.5
SHROOM3Q8TF72 RNU6-656P-201ENST00000516785 107 ntBASIC-0.59□□□□□ -2.5
SHROOM3Q8TF72 RNU6-755P-201ENST00000364400 103 ntBASIC-0.6□□□□□ -2.51
SHROOM3Q8TF72 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.6□□□□□ -2.51
SHROOM3Q8TF72 snoMBII-202.2-201ENST00000517263 86 ntBASIC-0.6□□□□□ -2.51
SHROOM3Q8TF72 MIR4464-201ENST00000580818 92 ntBASIC-0.6□□□□□ -2.51
SHROOM3Q8TF72 MIR6888-201ENST00000621977 67 ntBASIC-0.6□□□□□ -2.51
SHROOM3Q8TF72 MIR4320-201ENST00000636981 65 ntBASIC-0.6□□□□□ -2.51
SHROOM3Q8TF72 MIR1297-201ENST00000637311 77 ntBASIC-0.6□□□□□ -2.51
SHROOM3Q8TF72 Y_RNA.73-201ENST00000362910 113 ntBASIC-0.61□□□□□ -2.51
SHROOM3Q8TF72 SNORD114-25-201ENST00000363742 72 ntBASIC-0.61□□□□□ -2.51
SHROOM3Q8TF72 RNY1P1-201ENST00000364372 112 ntBASIC-0.61□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 865.3 ms