Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 RNU6-1124P-201ENST00000384169 107 ntBASIC-0.21□□□□□ -2.44
CLRN3Q8NCR9 AL109933.3-201ENST00000619095 188 ntBASIC-0.21□□□□□ -2.44
CLRN3Q8NCR9 SNORD114-12-201ENST00000365400 75 ntBASIC-0.22□□□□□ -2.44
CLRN3Q8NCR9 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.22□□□□□ -2.44
CLRN3Q8NCR9 SNORD4A-201ENST00000459174 72 ntBASIC-0.23□□□□□ -2.45
CLRN3Q8NCR9 SNORA72.7-201ENST00000516349 94 ntBASIC-0.23□□□□□ -2.45
CLRN3Q8NCR9 SNORD45.1-201ENST00000363181 77 ntBASIC-0.24□□□□□ -2.45
CLRN3Q8NCR9 SNORA33.1-201ENST00000364957 130 ntBASIC-0.24□□□□□ -2.45
CLRN3Q8NCR9 MIR9-2-201ENST00000384838 87 ntBASIC-0.24□□□□□ -2.45
CLRN3Q8NCR9 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.24□□□□□ -2.45
CLRN3Q8NCR9 MIR3666-201ENST00000607845 111 ntBASIC-0.24□□□□□ -2.45
CLRN3Q8NCR9 MIR8053-201ENST00000613344 75 ntBASIC-0.24□□□□□ -2.45
CLRN3Q8NCR9 SNORA32.1-201ENST00000364514 115 ntBASIC-0.25□□□□□ -2.45
CLRN3Q8NCR9 MIRLET7B-201ENST00000385140 83 ntBASIC-0.25□□□□□ -2.45
CLRN3Q8NCR9 SNORD78.1-201ENST00000390866 65 ntBASIC-0.25□□□□□ -2.45
CLRN3Q8NCR9 SCARNA18B-201ENST00000458806 135 ntBASIC-0.25□□□□□ -2.45
CLRN3Q8NCR9 RNU7-55P-201ENST00000459426 62 ntBASIC-0.25□□□□□ -2.45
CLRN3Q8NCR9 RNU6-228P-201ENST00000362700 106 ntBASIC-0.26□□□□□ -2.45
CLRN3Q8NCR9 RNU6-604P-201ENST00000390917 100 ntBASIC-0.26□□□□□ -2.45
CLRN3Q8NCR9 MIR2909-201ENST00000617113 69 ntBASIC-0.26□□□□□ -2.45
CLRN3Q8NCR9 MIR6779-201ENST00000617283 64 ntBASIC-0.26□□□□□ -2.45
CLRN3Q8NCR9 MIR655-201ENST00000362159 97 ntBASIC-0.27□□□□□ -2.45
CLRN3Q8NCR9 RNU6-337P-201ENST00000391243 106 ntBASIC-0.27□□□□□ -2.45
CLRN3Q8NCR9 snoR1.1-201ENST00000628177 80 ntBASIC-0.27□□□□□ -2.45
CLRN3Q8NCR9 RNU6-279P-201ENST00000391297 101 ntBASIC-0.28□□□□□ -2.45
CLRN3Q8NCR9 MIR1255A-201ENST00000408338 113 ntBASIC-0.28□□□□□ -2.45
CLRN3Q8NCR9 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.28□□□□□ -2.45
CLRN3Q8NCR9 RNU6-973P-201ENST00000364690 107 ntBASIC-0.29□□□□□ -2.46
CLRN3Q8NCR9 RNU6-901P-201ENST00000384593 106 ntBASIC-0.29□□□□□ -2.46
CLRN3Q8NCR9 MIR329-2-201ENST00000385029 84 ntBASIC-0.3□□□□□ -2.46
CLRN3Q8NCR9 RNU6-70P-201ENST00000516438 60 ntBASIC-0.3□□□□□ -2.46
CLRN3Q8NCR9 U7.4-201ENST00000614961 63 ntBASIC-0.3□□□□□ -2.46
CLRN3Q8NCR9 RNU6-645P-201ENST00000364649 106 ntBASIC-0.31□□□□□ -2.46
CLRN3Q8NCR9 RNU6-24P-201ENST00000384440 107 ntBASIC-0.31□□□□□ -2.46
CLRN3Q8NCR9 AL391099.1-201ENST00000624635 187 ntBASIC-0.31□□□□□ -2.46
CLRN3Q8NCR9 RNA5SP257-201ENST00000363023 116 ntBASIC-0.32□□□□□ -2.46
CLRN3Q8NCR9 RNU6-857P-201ENST00000515893 110 ntBASIC-0.32□□□□□ -2.46
CLRN3Q8NCR9 RNA5SP470-201ENST00000516463 106 ntBASIC-0.32□□□□□ -2.46
CLRN3Q8NCR9 RNU6-656P-201ENST00000516785 107 ntBASIC-0.32□□□□□ -2.46
CLRN3Q8NCR9 CYP3A54P-201ENST00000566950 75 ntBASIC-0.32□□□□□ -2.46
CLRN3Q8NCR9 MIR214-201ENST00000385214 110 ntBASIC-0.33□□□□□ -2.46
CLRN3Q8NCR9 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.34□□□□□ -2.46
CLRN3Q8NCR9 MTND4LP1-201ENST00000446263 157 ntBASIC-0.34□□□□□ -2.46
CLRN3Q8NCR9 MIR4432-201ENST00000581823 84 ntBASIC-0.34□□□□□ -2.46
CLRN3Q8NCR9 SNORD115-23-201ENST00000364461 82 ntBASIC-0.35□□□□□ -2.47
CLRN3Q8NCR9 MIR154-201ENST00000385243 84 ntBASIC-0.35□□□□□ -2.47
CLRN3Q8NCR9 RNA5SP66-201ENST00000517178 101 ntBASIC-0.35□□□□□ -2.47
CLRN3Q8NCR9 IGLVI-20-201ENST00000519296 130 ntBASIC-0.35□□□□□ -2.47
CLRN3Q8NCR9 AC090617.8-201ENST00000623339 167 ntBASIC-0.35□□□□□ -2.47
CLRN3Q8NCR9 MIR664A-201ENST00000626086 82 ntBASIC-0.35□□□□□ -2.47
CLRN3Q8NCR9 SNORD115-22-201ENST00000364456 82 ntBASIC-0.36□□□□□ -2.47
CLRN3Q8NCR9 RNU6-411P-201ENST00000384451 107 ntBASIC-0.36□□□□□ -2.47
CLRN3Q8NCR9 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.36□□□□□ -2.47
CLRN3Q8NCR9 RNA5SP300-201ENST00000391197 107 ntBASIC-0.36□□□□□ -2.47
CLRN3Q8NCR9 RNU6-587P-201ENST00000391282 106 ntBASIC-0.36□□□□□ -2.47
CLRN3Q8NCR9 MIR1255B2-201ENST00000408618 67 ntBASIC-0.36□□□□□ -2.47
CLRN3Q8NCR9 AC096531.1-201ENST00000419107 107 ntBASIC-0.36□□□□□ -2.47
CLRN3Q8NCR9 uc_338.36-201ENST00000622331 158 ntBASIC-0.36□□□□□ -2.47
CLRN3Q8NCR9 Y_RNA.685-201ENST00000516532 108 ntBASIC-0.37□□□□□ -2.47
CLRN3Q8NCR9 RNA5SP285-201ENST00000516619 119 ntBASIC-0.37□□□□□ -2.47
CLRN3Q8NCR9 AL590491.3-201ENST00000610731 82 ntBASIC-0.37□□□□□ -2.47
CLRN3Q8NCR9 SNORD56B-201ENST00000384713 71 ntBASIC-0.38□□□□□ -2.47
CLRN3Q8NCR9 MIR3134-201ENST00000579433 74 ntBASIC-0.38□□□□□ -2.47
CLRN3Q8NCR9 MIR4788-201ENST00000639104 80 ntBASIC-0.38□□□□□ -2.47
CLRN3Q8NCR9 AL021921.1-201ENST00000442774 93 ntBASIC-0.39□□□□□ -2.47
CLRN3Q8NCR9 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.39□□□□□ -2.47
CLRN3Q8NCR9 SNORD114-31-201ENST00000363219 75 ntBASIC-0.4□□□□□ -2.47
CLRN3Q8NCR9 SNORD113.1-201ENST00000363280 73 ntBASIC-0.4□□□□□ -2.47
CLRN3Q8NCR9 RNU6-982P-201ENST00000516216 102 ntBASIC-0.4□□□□□ -2.47
CLRN3Q8NCR9 AC093726.3-201ENST00000637588 150 ntBASIC-0.4□□□□□ -2.47
CLRN3Q8NCR9 SNORA62.4-201ENST00000365504 151 ntBASIC-0.41□□□□□ -2.48
CLRN3Q8NCR9 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.41□□□□□ -2.48
CLRN3Q8NCR9 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.41□□□□□ -2.48
CLRN3Q8NCR9 RNA5SP225-201ENST00000410874 135 ntBASIC-0.41□□□□□ -2.48
CLRN3Q8NCR9 AL445193.1-201ENST00000441183 141 ntBASIC-0.41□□□□□ -2.48
CLRN3Q8NCR9 RNU7-154P-201ENST00000516194 62 ntBASIC-0.41□□□□□ -2.48
CLRN3Q8NCR9 RNU6-881P-201ENST00000516813 102 ntBASIC-0.41□□□□□ -2.48
CLRN3Q8NCR9 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.41□□□□□ -2.48
CLRN3Q8NCR9 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.41□□□□□ -2.48
CLRN3Q8NCR9 RNU6-895P-201ENST00000384125 103 ntBASIC-0.42□□□□□ -2.48
CLRN3Q8NCR9 SNORD45A-201ENST00000384512 84 ntBASIC-0.42□□□□□ -2.48
CLRN3Q8NCR9 RNA5SP395-201ENST00000516567 118 ntBASIC-0.42□□□□□ -2.48
CLRN3Q8NCR9 MIR4645-201ENST00000583158 77 ntBASIC-0.42□□□□□ -2.48
CLRN3Q8NCR9 RNU6-668P-201ENST00000364180 107 ntBASIC-0.43□□□□□ -2.48
CLRN3Q8NCR9 MIR548C-201ENST00000384815 97 ntBASIC-0.43□□□□□ -2.48
CLRN3Q8NCR9 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.43□□□□□ -2.48
CLRN3Q8NCR9 AL353803.5-201ENST00000599815 141 ntBASIC-0.43□□□□□ -2.48
CLRN3Q8NCR9 MIR6759-201ENST00000638110 65 ntBASIC-0.43□□□□□ -2.48
CLRN3Q8NCR9 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.44□□□□□ -2.48
CLRN3Q8NCR9 RNU6-518P-201ENST00000516056 96 ntBASIC-0.44□□□□□ -2.48
CLRN3Q8NCR9 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.44□□□□□ -2.48
CLRN3Q8NCR9 U2.7-201ENST00000619197 100 ntBASIC-0.44□□□□□ -2.48
CLRN3Q8NCR9 RNU6-687P-201ENST00000516443 89 ntBASIC-0.45□□□□□ -2.48
CLRN3Q8NCR9 MIR6854-201ENST00000614935 69 ntBASIC-0.45□□□□□ -2.48
CLRN3Q8NCR9 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.45□□□□□ -2.48
CLRN3Q8NCR9 MIR4280-201ENST00000582178 76 ntBASIC-0.46□□□□□ -2.48
CLRN3Q8NCR9 MIR6851-201ENST00000617060 67 ntBASIC-0.46□□□□□ -2.48
CLRN3Q8NCR9 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.47□□□□□ -2.48
CLRN3Q8NCR9 SNORD114-28-201ENST00000363610 72 ntBASIC-0.47□□□□□ -2.48
CLRN3Q8NCR9 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.48□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 211.6 ms