Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 U4.2-201ENST00000618561 85 ntBASIC-1.57□□□□□ -2.66
LRRC28Q86X40 U2.7-201ENST00000619197 100 ntBASIC-1.57□□□□□ -2.66
LRRC28Q86X40 SNORD116-10-201ENST00000363791 102 ntBASIC-1.58□□□□□ -2.66
LRRC28Q86X40 RNU6-340P-201ENST00000364005 107 ntBASIC-1.58□□□□□ -2.66
LRRC28Q86X40 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.58□□□□□ -2.66
LRRC28Q86X40 AC090616.4-201ENST00000448026 115 ntBASIC-1.58□□□□□ -2.66
LRRC28Q86X40 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.58□□□□□ -2.66
LRRC28Q86X40 SNORD33.1-201ENST00000516213 88 ntBASIC-1.58□□□□□ -2.66
LRRC28Q86X40 MIR4490-201ENST00000582647 84 ntBASIC-1.58□□□□□ -2.66
LRRC28Q86X40 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.58□□□□□ -2.66
LRRC28Q86X40 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.58□□□□□ -2.66
LRRC28Q86X40 RNU6-574P-201ENST00000384265 107 ntBASIC-1.59□□□□□ -2.66
LRRC28Q86X40 RNU7-88P-201ENST00000458752 63 ntBASIC-1.59□□□□□ -2.66
LRRC28Q86X40 SCARNA23-201ENST00000516060 130 ntBASIC-1.59□□□□□ -2.66
LRRC28Q86X40 RNU6-327P-201ENST00000516270 127 ntBASIC-1.59□□□□□ -2.66
LRRC28Q86X40 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.59□□□□□ -2.66
LRRC28Q86X40 MIR4441-201ENST00000582623 100 ntBASIC-1.59□□□□□ -2.66
LRRC28Q86X40 RNU6-379P-201ENST00000363813 104 ntBASIC-1.6□□□□□ -2.67
LRRC28Q86X40 RNU6-196P-201ENST00000384315 107 ntBASIC-1.6□□□□□ -2.67
LRRC28Q86X40 AL078595.1-201ENST00000404458 226 ntBASIC-1.6□□□□□ -2.67
LRRC28Q86X40 MIR1236-201ENST00000408340 102 ntBASIC-1.6□□□□□ -2.67
LRRC28Q86X40 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-1.6□□□□□ -2.67
LRRC28Q86X40 RNU6-257P-201ENST00000410238 98 ntBASIC-1.6□□□□□ -2.67
LRRC28Q86X40 RNU6-807P-201ENST00000516805 107 ntBASIC-1.6□□□□□ -2.67
LRRC28Q86X40 RNU6-537P-201ENST00000517277 103 ntBASIC-1.6□□□□□ -2.67
LRRC28Q86X40 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.6□□□□□ -2.67
LRRC28Q86X40 SNORA40-201ENST00000388090 126 ntBASIC-1.61□□□□□ -2.67
LRRC28Q86X40 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.61□□□□□ -2.67
LRRC28Q86X40 AL035461.1-201ENST00000421490 332 ntBASIC-1.61□□□□□ -2.67
LRRC28Q86X40 RNU6-168P-201ENST00000516189 101 ntBASIC-1.61□□□□□ -2.67
LRRC28Q86X40 RNU6-478P-201ENST00000363904 110 ntBASIC-1.62□□□□□ -2.67
LRRC28Q86X40 RNU7-153P-201ENST00000516455 62 ntBASIC-1.62□□□□□ -2.67
LRRC28Q86X40 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.63□□□□□ -2.67
LRRC28Q86X40 AL450471.1-201ENST00000447509 127 ntBASIC-1.63□□□□□ -2.67
LRRC28Q86X40 AL353621.2-201ENST00000605340 133 ntBASIC-1.63□□□□□ -2.67
LRRC28Q86X40 RPL35AP4-201ENST00000412007 102 ntBASIC-1.64□□□□□ -2.67
LRRC28Q86X40 MIR1246-201ENST00000636535 73 ntBASIC-1.64□□□□□ -2.67
LRRC28Q86X40 U6.95-201ENST00000636931 70 ntBASIC-1.64□□□□□ -2.67
LRRC28Q86X40 RNU6-1045P-201ENST00000516321 107 ntBASIC-1.65□□□□□ -2.67
LRRC28Q86X40 RNU6-681P-201ENST00000364012 104 ntBASIC-1.66□□□□□ -2.68
LRRC28Q86X40 MIR548A3-201ENST00000385297 97 ntBASIC-1.66□□□□□ -2.68
LRRC28Q86X40 RNA5SP86-201ENST00000390869 98 ntBASIC-1.66□□□□□ -2.68
LRRC28Q86X40 RNU6-1211P-201ENST00000459179 105 ntBASIC-1.66□□□□□ -2.68
LRRC28Q86X40 RNU6-659P-201ENST00000516454 104 ntBASIC-1.66□□□□□ -2.68
LRRC28Q86X40 RNU6-388P-201ENST00000517012 105 ntBASIC-1.66□□□□□ -2.68
LRRC28Q86X40 RNU6-389P-201ENST00000517048 105 ntBASIC-1.66□□□□□ -2.68
LRRC28Q86X40 MIR4723-201ENST00000585070 81 ntBASIC-1.66□□□□□ -2.68
LRRC28Q86X40 RNU6-79P-201ENST00000362511 107 ntBASIC-1.67□□□□□ -2.68
LRRC28Q86X40 SNORD115-27-201ENST00000364430 82 ntBASIC-1.67□□□□□ -2.68
LRRC28Q86X40 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.67□□□□□ -2.68
LRRC28Q86X40 SNORD114-3-201ENST00000364969 75 ntBASIC-1.67□□□□□ -2.68
LRRC28Q86X40 RNU6-886P-201ENST00000384319 105 ntBASIC-1.67□□□□□ -2.68
LRRC28Q86X40 MIR548H1-201ENST00000408610 102 ntBASIC-1.67□□□□□ -2.68
LRRC28Q86X40 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.67□□□□□ -2.68
LRRC28Q86X40 RNU7-61P-201ENST00000515897 61 ntBASIC-1.67□□□□□ -2.68
LRRC28Q86X40 RNU7-200P-201ENST00000516105 62 ntBASIC-1.67□□□□□ -2.68
LRRC28Q86X40 RNU6-645P-201ENST00000364649 106 ntBASIC-1.68□□□□□ -2.68
LRRC28Q86X40 RNU6-463P-201ENST00000384340 107 ntBASIC-1.68□□□□□ -2.68
LRRC28Q86X40 SNORD77.2-201ENST00000391045 68 ntBASIC-1.68□□□□□ -2.68
LRRC28Q86X40 RNU6-400P-201ENST00000391173 106 ntBASIC-1.68□□□□□ -2.68
LRRC28Q86X40 RNU7-174P-201ENST00000516248 59 ntBASIC-1.68□□□□□ -2.68
LRRC28Q86X40 RNU6-971P-201ENST00000516920 106 ntBASIC-1.68□□□□□ -2.68
LRRC28Q86X40 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.69□□□□□ -2.68
LRRC28Q86X40 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.69□□□□□ -2.68
LRRC28Q86X40 RNU6-458P-201ENST00000384179 107 ntBASIC-1.69□□□□□ -2.68
LRRC28Q86X40 MT-TG-201ENST00000387429 68 ntBASIC-1.69□□□□□ -2.68
LRRC28Q86X40 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.69□□□□□ -2.68
LRRC28Q86X40 U6.58-201ENST00000613107 107 ntBASIC-1.69□□□□□ -2.68
LRRC28Q86X40 RNU6-704P-201ENST00000364162 103 ntBASIC-1.7□□□□□ -2.68
LRRC28Q86X40 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.7□□□□□ -2.68
LRRC28Q86X40 RNU6-880P-201ENST00000384526 107 ntBASIC-1.7□□□□□ -2.68
LRRC28Q86X40 AC018880.2-201ENST00000414265 201 ntBASIC-1.7□□□□□ -2.68
LRRC28Q86X40 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.7□□□□□ -2.68
LRRC28Q86X40 RNU6-608P-201ENST00000383927 104 ntBASIC-1.71□□□□□ -2.68
LRRC28Q86X40 MIR590-201ENST00000385008 97 ntBASIC-1.71□□□□□ -2.68
LRRC28Q86X40 RNU6-696P-201ENST00000390834 107 ntBASIC-1.71□□□□□ -2.68
LRRC28Q86X40 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.71□□□□□ -2.68
LRRC28Q86X40 SCARNA15.1-201ENST00000516384 125 ntBASIC-1.71□□□□□ -2.68
LRRC28Q86X40 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.71□□□□□ -2.68
LRRC28Q86X40 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.72□□□□□ -2.68
LRRC28Q86X40 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.72□□□□□ -2.68
LRRC28Q86X40 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.72□□□□□ -2.68
LRRC28Q86X40 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.72□□□□□ -2.68
LRRC28Q86X40 RNU6-540P-201ENST00000384622 101 ntBASIC-1.72□□□□□ -2.68
LRRC28Q86X40 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.72□□□□□ -2.68
LRRC28Q86X40 MTATP8P2-201ENST00000435212 202 ntBASIC-1.72□□□□□ -2.68
LRRC28Q86X40 U7.3-201ENST00000616123 62 ntBASIC-1.72□□□□□ -2.68
LRRC28Q86X40 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.73□□□□□ -2.69
LRRC28Q86X40 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.73□□□□□ -2.69
LRRC28Q86X40 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.73□□□□□ -2.69
LRRC28Q86X40 MIR520D-201ENST00000385002 87 ntBASIC-1.73□□□□□ -2.69
LRRC28Q86X40 MIR487B-201ENST00000385021 84 ntBASIC-1.73□□□□□ -2.69
LRRC28Q86X40 RNU6-587P-201ENST00000391282 106 ntBASIC-1.73□□□□□ -2.69
LRRC28Q86X40 MIR548Q-201ENST00000408404 100 ntBASIC-1.73□□□□□ -2.69
LRRC28Q86X40 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.73□□□□□ -2.69
LRRC28Q86X40 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.73□□□□□ -2.69
LRRC28Q86X40 RNU6-1212P-201ENST00000517023 104 ntBASIC-1.73□□□□□ -2.69
LRRC28Q86X40 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.74□□□□□ -2.69
LRRC28Q86X40 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.74□□□□□ -2.69
LRRC28Q86X40 Y_RNA.506-201ENST00000384494 102 ntBASIC-1.74□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 177.2 ms