Protein–RNA interactions for Protein: Q3SY46

KRTAP13-3, Keratin-associated protein 13-3, humanhuman

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP13-3Q3SY46 MIR489-201ENST00000384923 84 ntBASIC0.48□□□□□ -2.33
KRTAP13-3Q3SY46 ACA64.5-201ENST00000516207 127 ntBASIC0.48□□□□□ -2.33
KRTAP13-3Q3SY46 RNU6-175P-201ENST00000516896 107 ntBASIC0.48□□□□□ -2.33
KRTAP13-3Q3SY46 RNU7-151P-201ENST00000516930 53 ntBASIC0.48□□□□□ -2.33
KRTAP13-3Q3SY46 RNU6-419P-201ENST00000517030 63 ntBASIC0.48□□□□□ -2.33
KRTAP13-3Q3SY46 RNU7-188P-201ENST00000517063 64 ntBASIC0.48□□□□□ -2.33
KRTAP13-3Q3SY46 CYP3A137P-201ENST00000562436 69 ntBASIC0.48□□□□□ -2.33
KRTAP13-3Q3SY46 SNORA25.18-201ENST00000607153 114 ntBASIC0.48□□□□□ -2.33
KRTAP13-3Q3SY46 AC022709.1-201ENST00000615967 87 ntBASIC0.48□□□□□ -2.33
KRTAP13-3Q3SY46 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
KRTAP13-3Q3SY46 Y_RNA.69-201ENST00000362885 109 ntBASIC0.47□□□□□ -2.33
KRTAP13-3Q3SY46 MIR200A-201ENST00000384875 90 ntBASIC0.47□□□□□ -2.33
KRTAP13-3Q3SY46 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.47□□□□□ -2.33
KRTAP13-3Q3SY46 RPL39P28-201ENST00000465655 155 ntBASIC0.47□□□□□ -2.33
KRTAP13-3Q3SY46 RNU6-351P-201ENST00000516097 100 ntBASIC0.47□□□□□ -2.33
KRTAP13-3Q3SY46 RNA5SP255-201ENST00000516370 107 ntBASIC0.47□□□□□ -2.33
KRTAP13-3Q3SY46 MIR4698-201ENST00000577795 80 ntBASIC0.47□□□□□ -2.33
KRTAP13-3Q3SY46 SNORD114-2-201ENST00000363953 78 ntBASIC0.46□□□□□ -2.34
KRTAP13-3Q3SY46 RNA5SP517-201ENST00000364724 117 ntBASIC0.46□□□□□ -2.34
KRTAP13-3Q3SY46 MIRLET7B-201ENST00000385140 83 ntBASIC0.46□□□□□ -2.34
KRTAP13-3Q3SY46 MIR146A-201ENST00000385201 99 ntBASIC0.46□□□□□ -2.34
KRTAP13-3Q3SY46 RNA5SP222-201ENST00000411039 105 ntBASIC0.46□□□□□ -2.34
KRTAP13-3Q3SY46 Y_RNA.698-201ENST00000516798 118 ntBASIC0.46□□□□□ -2.34
KRTAP13-3Q3SY46 RNU6-782P-201ENST00000516852 104 ntBASIC0.46□□□□□ -2.34
KRTAP13-3Q3SY46 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.45□□□□□ -2.34
KRTAP13-3Q3SY46 RNU6-502P-201ENST00000362419 108 ntBASIC0.45□□□□□ -2.34
KRTAP13-3Q3SY46 RNU6-247P-201ENST00000362636 107 ntBASIC0.45□□□□□ -2.34
KRTAP13-3Q3SY46 RNU6-1036P-201ENST00000383959 104 ntBASIC0.45□□□□□ -2.34
KRTAP13-3Q3SY46 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
KRTAP13-3Q3SY46 RNU7-88P-201ENST00000458752 63 ntBASIC0.45□□□□□ -2.34
KRTAP13-3Q3SY46 RNU7-154P-201ENST00000516194 62 ntBASIC0.45□□□□□ -2.34
KRTAP13-3Q3SY46 RNU4-54P-201ENST00000516428 129 ntBASIC0.45□□□□□ -2.34
KRTAP13-3Q3SY46 MIR20A-201ENST00000362279 71 ntBASIC0.44□□□□□ -2.34
KRTAP13-3Q3SY46 Y_RNA.423-201ENST00000384057 113 ntBASIC0.44□□□□□ -2.34
KRTAP13-3Q3SY46 RNU6-1267P-201ENST00000410747 107 ntBASIC0.44□□□□□ -2.34
KRTAP13-3Q3SY46 AC244090.1-201ENST00000441884 93 ntBASIC0.44□□□□□ -2.34
KRTAP13-3Q3SY46 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.44□□□□□ -2.34
KRTAP13-3Q3SY46 RNU6ATAC14P-201ENST00000516218 91 ntBASIC0.44□□□□□ -2.34
KRTAP13-3Q3SY46 RNU6-1206P-201ENST00000516339 103 ntBASIC0.44□□□□□ -2.34
KRTAP13-3Q3SY46 MIR5000-201ENST00000577717 103 ntBASIC0.44□□□□□ -2.34
KRTAP13-3Q3SY46 MIR4661-201ENST00000582720 75 ntBASIC0.44□□□□□ -2.34
KRTAP13-3Q3SY46 AL353803.5-201ENST00000599815 141 ntBASIC0.44□□□□□ -2.34
KRTAP13-3Q3SY46 RN7SL660P-201ENST00000614852 299 ntBASIC0.44□□□□□ -2.34
KRTAP13-3Q3SY46 MIR6755-201ENST00000619993 66 ntBASIC0.44□□□□□ -2.34
KRTAP13-3Q3SY46 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.43□□□□□ -2.34
KRTAP13-3Q3SY46 Y_RNA.139-201ENST00000363464 102 ntBASIC0.43□□□□□ -2.34
KRTAP13-3Q3SY46 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
KRTAP13-3Q3SY46 SNORA36.2-201ENST00000384004 127 ntBASIC0.43□□□□□ -2.34
KRTAP13-3Q3SY46 MIR125B1-201ENST00000385236 88 ntBASIC0.43□□□□□ -2.34
KRTAP13-3Q3SY46 MIR501-201ENST00000390204 84 ntBASIC0.43□□□□□ -2.34
KRTAP13-3Q3SY46 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.43□□□□□ -2.34
KRTAP13-3Q3SY46 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.43□□□□□ -2.34
KRTAP13-3Q3SY46 RNU6-1262P-201ENST00000516217 96 ntBASIC0.43□□□□□ -2.34
KRTAP13-3Q3SY46 MIR548AL-201ENST00000578416 97 ntBASIC0.43□□□□□ -2.34
KRTAP13-3Q3SY46 MIR4432-201ENST00000581823 84 ntBASIC0.43□□□□□ -2.34
KRTAP13-3Q3SY46 MIR6515-201ENST00000619843 57 ntBASIC0.43□□□□□ -2.34
KRTAP13-3Q3SY46 AC098934.3-201ENST00000430450 190 ntBASIC0.42□□□□□ -2.34
KRTAP13-3Q3SY46 U7.5-201ENST00000517224 61 ntBASIC0.42□□□□□ -2.34
KRTAP13-3Q3SY46 MIR4464-201ENST00000580818 92 ntBASIC0.42□□□□□ -2.34
KRTAP13-3Q3SY46 MIR4677-201ENST00000584153 80 ntBASIC0.42□□□□□ -2.34
KRTAP13-3Q3SY46 MIR3925-201ENST00000584674 77 ntBASIC0.42□□□□□ -2.34
KRTAP13-3Q3SY46 AL353765.1-201ENST00000605514 183 ntBASIC0.42□□□□□ -2.34
KRTAP13-3Q3SY46 MIR6866-201ENST00000638146 69 ntBASIC0.42□□□□□ -2.34
KRTAP13-3Q3SY46 SNORD115-23-201ENST00000364461 82 ntBASIC0.41□□□□□ -2.34
KRTAP13-3Q3SY46 MIR329-2-201ENST00000385029 84 ntBASIC0.41□□□□□ -2.34
KRTAP13-3Q3SY46 AP000676.1-201ENST00000533307 52 ntBASIC0.41□□□□□ -2.34
KRTAP13-3Q3SY46 MIR4714-201ENST00000580728 77 ntBASIC0.41□□□□□ -2.34
KRTAP13-3Q3SY46 AC138207.3-201ENST00000585289 166 ntBASIC0.41□□□□□ -2.34
KRTAP13-3Q3SY46 MIR6835-201ENST00000621552 64 ntBASIC0.41□□□□□ -2.34
KRTAP13-3Q3SY46 MIR6888-201ENST00000621977 67 ntBASIC0.41□□□□□ -2.34
KRTAP13-3Q3SY46 uc_338.36-201ENST00000622331 158 ntBASIC0.41□□□□□ -2.34
KRTAP13-3Q3SY46 MTRNR2L9-201ENST00000622562 75 ntBASIC0.41□□□□□ -2.34
KRTAP13-3Q3SY46 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.4□□□□□ -2.35
KRTAP13-3Q3SY46 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
KRTAP13-3Q3SY46 SNORD118-201ENST00000363593 134 ntBASIC0.4□□□□□ -2.35
KRTAP13-3Q3SY46 SNORD114-29-201ENST00000364819 70 ntBASIC0.4□□□□□ -2.35
KRTAP13-3Q3SY46 RNU6-742P-201ENST00000365289 107 ntBASIC0.4□□□□□ -2.35
KRTAP13-3Q3SY46 MIR508-201ENST00000384857 115 ntBASIC0.4□□□□□ -2.35
KRTAP13-3Q3SY46 MIR598-201ENST00000384868 97 ntBASIC0.4□□□□□ -2.35
KRTAP13-3Q3SY46 MIR29B1-201ENST00000385015 81 ntBASIC0.4□□□□□ -2.35
KRTAP13-3Q3SY46 MIR548H4-201ENST00000408689 111 ntBASIC0.4□□□□□ -2.35
KRTAP13-3Q3SY46 AL451105.1-201ENST00000450005 189 ntBASIC0.4□□□□□ -2.35
KRTAP13-3Q3SY46 RNU6-229P-201ENST00000516614 102 ntBASIC0.4□□□□□ -2.35
KRTAP13-3Q3SY46 AC108676.2-201ENST00000605225 163 ntBASIC0.4□□□□□ -2.35
KRTAP13-3Q3SY46 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.4□□□□□ -2.35
KRTAP13-3Q3SY46 MIR499B-201ENST00000636498 73 ntBASIC0.4□□□□□ -2.35
KRTAP13-3Q3SY46 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
KRTAP13-3Q3SY46 MIR608-201ENST00000384820 100 ntBASIC0.39□□□□□ -2.35
KRTAP13-3Q3SY46 MIR140-201ENST00000385282 100 ntBASIC0.39□□□□□ -2.35
KRTAP13-3Q3SY46 RNU6-258P-201ENST00000390884 101 ntBASIC0.39□□□□□ -2.35
KRTAP13-3Q3SY46 RNA5SP470-201ENST00000516463 106 ntBASIC0.39□□□□□ -2.35
KRTAP13-3Q3SY46 RNU7-160P-201ENST00000516660 62 ntBASIC0.39□□□□□ -2.35
KRTAP13-3Q3SY46 RNU6-1174P-201ENST00000517278 101 ntBASIC0.39□□□□□ -2.35
KRTAP13-3Q3SY46 MIR5706-201ENST00000579841 80 ntBASIC0.39□□□□□ -2.35
KRTAP13-3Q3SY46 RNU6-828P-201ENST00000364876 107 ntBASIC0.38□□□□□ -2.35
KRTAP13-3Q3SY46 SNORA2A-201ENST00000383885 135 ntBASIC0.38□□□□□ -2.35
KRTAP13-3Q3SY46 RNU6-945P-201ENST00000383947 107 ntBASIC0.38□□□□□ -2.35
KRTAP13-3Q3SY46 MIR106A-201ENST00000384870 81 ntBASIC0.38□□□□□ -2.35
KRTAP13-3Q3SY46 MIR548AA1-201ENST00000384971 97 ntBASIC0.38□□□□□ -2.35
KRTAP13-3Q3SY46 MIR760-201ENST00000390220 80 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 202.9 ms