Protein–RNA interactions for Protein: P61568

ERVK11-1, Putative endogenous retrovirus group K member 11-1 Env polyprotein, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVK11-1P61568 RNU6-1089P-201ENST00000516473 104 ntBASIC0.18□□□□□ -2.38
ERVK11-1P61568 AP000676.1-201ENST00000533307 52 ntBASIC0.18□□□□□ -2.38
ERVK11-1P61568 U6.96-201ENST00000636425 70 ntBASIC0.18□□□□□ -2.38
ERVK11-1P61568 MIR1295A-201ENST00000408463 79 ntBASIC0.17□□□□□ -2.38
ERVK11-1P61568 RNU6-871P-201ENST00000516122 100 ntBASIC0.17□□□□□ -2.38
ERVK11-1P61568 RNU6-539P-201ENST00000516665 103 ntBASIC0.17□□□□□ -2.38
ERVK11-1P61568 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.17□□□□□ -2.38
ERVK11-1P61568 MIR6514-201ENST00000622549 70 ntBASIC0.17□□□□□ -2.38
ERVK11-1P61568 SNORD114-5-201ENST00000362928 70 ntBASIC0.16□□□□□ -2.38
ERVK11-1P61568 RNU6-668P-201ENST00000364180 107 ntBASIC0.16□□□□□ -2.38
ERVK11-1P61568 SNORA15B-2-201ENST00000384058 135 ntBASIC0.16□□□□□ -2.38
ERVK11-1P61568 SNORA15B-1-201ENST00000384334 135 ntBASIC0.16□□□□□ -2.38
ERVK11-1P61568 RNU6-1162P-201ENST00000384443 104 ntBASIC0.16□□□□□ -2.38
ERVK11-1P61568 RNU6-800P-201ENST00000384473 103 ntBASIC0.16□□□□□ -2.38
ERVK11-1P61568 MIRLET7B-201ENST00000385140 83 ntBASIC0.16□□□□□ -2.38
ERVK11-1P61568 SNORA75.1-201ENST00000391130 148 ntBASIC0.16□□□□□ -2.38
ERVK11-1P61568 MIR1265-201ENST00000408444 86 ntBASIC0.16□□□□□ -2.38
ERVK11-1P61568 MIR1255B2-201ENST00000408618 67 ntBASIC0.16□□□□□ -2.38
ERVK11-1P61568 SNORA62.5-201ENST00000516634 120 ntBASIC0.16□□□□□ -2.38
ERVK11-1P61568 MIR548V-201ENST00000584165 80 ntBASIC0.16□□□□□ -2.38
ERVK11-1P61568 MIR6507-201ENST00000613630 70 ntBASIC0.16□□□□□ -2.38
ERVK11-1P61568 SNORD115-25-201ENST00000362619 82 ntBASIC0.15□□□□□ -2.39
ERVK11-1P61568 RNA5SP214-201ENST00000363378 118 ntBASIC0.15□□□□□ -2.39
ERVK11-1P61568 Y_RNA.375-201ENST00000365625 101 ntBASIC0.15□□□□□ -2.39
ERVK11-1P61568 RNU7-174P-201ENST00000516248 59 ntBASIC0.15□□□□□ -2.39
ERVK11-1P61568 RNU6-180P-201ENST00000516697 61 ntBASIC0.15□□□□□ -2.39
ERVK11-1P61568 U4.4-201ENST00000620626 117 ntBASIC0.15□□□□□ -2.39
ERVK11-1P61568 MIR4315-1-201ENST00000636800 73 ntBASIC0.15□□□□□ -2.39
ERVK11-1P61568 MIR924-201ENST00000638017 53 ntBASIC0.15□□□□□ -2.39
ERVK11-1P61568 MIR4315-2-201ENST00000640925 73 ntBASIC0.15□□□□□ -2.39
ERVK11-1P61568 SNORD114-9-201ENST00000364370 72 ntBASIC0.14□□□□□ -2.39
ERVK11-1P61568 MIR548C-201ENST00000384815 97 ntBASIC0.14□□□□□ -2.39
ERVK11-1P61568 MIR630-201ENST00000384957 97 ntBASIC0.14□□□□□ -2.39
ERVK11-1P61568 MIR145-201ENST00000384967 88 ntBASIC0.14□□□□□ -2.39
ERVK11-1P61568 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.14□□□□□ -2.39
ERVK11-1P61568 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.14□□□□□ -2.39
ERVK11-1P61568 RNA5SP480-201ENST00000516840 109 ntBASIC0.14□□□□□ -2.39
ERVK11-1P61568 MIR4514-201ENST00000581410 57 ntBASIC0.14□□□□□ -2.39
ERVK11-1P61568 SNORA42.1-201ENST00000363515 137 ntBASIC0.13□□□□□ -2.39
ERVK11-1P61568 MIR519A2-201ENST00000384990 87 ntBASIC0.13□□□□□ -2.39
ERVK11-1P61568 RNA5SP299-201ENST00000391203 116 ntBASIC0.13□□□□□ -2.39
ERVK11-1P61568 MTND4LP1-201ENST00000446263 157 ntBASIC0.13□□□□□ -2.39
ERVK11-1P61568 MIR1273G-201ENST00000577677 100 ntBASIC0.13□□□□□ -2.39
ERVK11-1P61568 uc_338.36-201ENST00000622331 158 ntBASIC0.13□□□□□ -2.39
ERVK11-1P61568 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
ERVK11-1P61568 AC244250.2-201ENST00000418731 148 ntBASIC0.12□□□□□ -2.39
ERVK11-1P61568 MIR655-201ENST00000362159 97 ntBASIC0.11□□□□□ -2.39
ERVK11-1P61568 SNORA25.4-201ENST00000363666 124 ntBASIC0.11□□□□□ -2.39
ERVK11-1P61568 Y_RNA.325-201ENST00000365171 122 ntBASIC0.11□□□□□ -2.39
ERVK11-1P61568 RNU6-929P-201ENST00000384429 107 ntBASIC0.11□□□□□ -2.39
ERVK11-1P61568 MIR9-2-201ENST00000384838 87 ntBASIC0.11□□□□□ -2.39
ERVK11-1P61568 RNU7-165P-201ENST00000458864 60 ntBASIC0.11□□□□□ -2.39
ERVK11-1P61568 RNA5SP98-201ENST00000363158 137 ntBASIC0.1□□□□□ -2.39
ERVK11-1P61568 Y_RNA.205-201ENST00000364128 113 ntBASIC0.1□□□□□ -2.39
ERVK11-1P61568 SNORD115-23-201ENST00000364461 82 ntBASIC0.1□□□□□ -2.39
ERVK11-1P61568 RNU6-518P-201ENST00000516056 96 ntBASIC0.1□□□□□ -2.39
ERVK11-1P61568 CR383656.4-201ENST00000546909 122 ntBASIC0.1□□□□□ -2.39
ERVK11-1P61568 SNORD114-26-201ENST00000363543 72 ntBASIC0.09□□□□□ -2.4
ERVK11-1P61568 MIR5704-201ENST00000584029 77 ntBASIC0.09□□□□□ -2.4
ERVK11-1P61568 MIR8068-201ENST00000618032 68 ntBASIC0.09□□□□□ -2.4
ERVK11-1P61568 AC023932.2-201ENST00000603176 175 ntBASIC0.08□□□□□ -2.4
ERVK11-1P61568 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.08□□□□□ -2.4
ERVK11-1P61568 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.08□□□□□ -2.4
ERVK11-1P61568 RNU6-455P-201ENST00000384681 107 ntBASIC0.07□□□□□ -2.4
ERVK11-1P61568 SNORD56B-201ENST00000384713 71 ntBASIC0.07□□□□□ -2.4
ERVK11-1P61568 MIR517B-201ENST00000385102 67 ntBASIC0.07□□□□□ -2.4
ERVK11-1P61568 MIR610-201ENST00000385139 96 ntBASIC0.07□□□□□ -2.4
ERVK11-1P61568 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.07□□□□□ -2.4
ERVK11-1P61568 RNU7-55P-201ENST00000459426 62 ntBASIC0.07□□□□□ -2.4
ERVK11-1P61568 Y_RNA.698-201ENST00000516798 118 ntBASIC0.07□□□□□ -2.4
ERVK11-1P61568 MIR4464-201ENST00000580818 92 ntBASIC0.07□□□□□ -2.4
ERVK11-1P61568 MIR4511-201ENST00000582784 87 ntBASIC0.07□□□□□ -2.4
ERVK11-1P61568 MIR8087-201ENST00000612745 78 ntBASIC0.07□□□□□ -2.4
ERVK11-1P61568 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.07□□□□□ -2.4
ERVK11-1P61568 RNU6-698P-201ENST00000363523 107 ntBASIC0.06□□□□□ -2.4
ERVK11-1P61568 RNU6-34P-201ENST00000364874 107 ntBASIC0.06□□□□□ -2.4
ERVK11-1P61568 SNORA41B-201ENST00000384785 128 ntBASIC0.06□□□□□ -2.4
ERVK11-1P61568 SNORD113-2-201ENST00000391082 72 ntBASIC0.06□□□□□ -2.4
ERVK11-1P61568 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.06□□□□□ -2.4
ERVK11-1P61568 SCARNA21.1-201ENST00000515996 128 ntBASIC0.06□□□□□ -2.4
ERVK11-1P61568 AL353803.5-201ENST00000599815 141 ntBASIC0.06□□□□□ -2.4
ERVK11-1P61568 MIR330-201ENST00000362196 94 ntBASIC0.05□□□□□ -2.4
ERVK11-1P61568 MIR148A-201ENST00000362215 68 ntBASIC0.05□□□□□ -2.4
ERVK11-1P61568 RNA5SP215-201ENST00000363440 122 ntBASIC0.05□□□□□ -2.4
ERVK11-1P61568 RNA5SP192-201ENST00000364404 120 ntBASIC0.05□□□□□ -2.4
ERVK11-1P61568 Y_RNA.246-201ENST00000364495 108 ntBASIC0.05□□□□□ -2.4
ERVK11-1P61568 Y_RNA.340-201ENST00000365330 92 ntBASIC0.05□□□□□ -2.4
ERVK11-1P61568 Y_RNA.540-201ENST00000384638 111 ntBASIC0.05□□□□□ -2.4
ERVK11-1P61568 SNORD2-201ENST00000459163 69 ntBASIC0.05□□□□□ -2.4
ERVK11-1P61568 RNU7-159P-201ENST00000459284 62 ntBASIC0.05□□□□□ -2.4
ERVK11-1P61568 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.05□□□□□ -2.4
ERVK11-1P61568 RNU6-590P-201ENST00000365039 107 ntBASIC0.04□□□□□ -2.4
ERVK11-1P61568 RNU6-471P-201ENST00000383944 106 ntBASIC0.04□□□□□ -2.4
ERVK11-1P61568 MIR1197-201ENST00000408818 88 ntBASIC0.04□□□□□ -2.4
ERVK11-1P61568 RNU6-542P-201ENST00000516405 103 ntBASIC0.04□□□□□ -2.4
ERVK11-1P61568 MIR4290-201ENST00000583807 95 ntBASIC0.04□□□□□ -2.4
ERVK11-1P61568 MIR6888-201ENST00000621977 67 ntBASIC0.04□□□□□ -2.4
ERVK11-1P61568 MIR892B-201ENST00000401279 77 ntBASIC0.03□□□□□ -2.4
ERVK11-1P61568 AL021921.1-201ENST00000442774 93 ntBASIC0.03□□□□□ -2.4
ERVK11-1P61568 MIR4768-201ENST00000585270 74 ntBASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 208.4 ms