Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 SNORD22.1-201ENST00000516331 125 ntBASIC-0.75□□□□□ -2.53
PEX3P56589 RNU6-267P-201ENST00000516714 103 ntBASIC-0.75□□□□□ -2.53
PEX3P56589 MIR4464-201ENST00000580818 92 ntBASIC-0.75□□□□□ -2.53
PEX3P56589 SNORD115-37-201ENST00000363768 82 ntBASIC-0.76□□□□□ -2.53
PEX3P56589 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.76□□□□□ -2.53
PEX3P56589 SNORD74.6-201ENST00000364796 70 ntBASIC-0.76□□□□□ -2.53
PEX3P56589 RNU6-675P-201ENST00000384236 104 ntBASIC-0.76□□□□□ -2.53
PEX3P56589 MIR521-2-201ENST00000384818 87 ntBASIC-0.76□□□□□ -2.53
PEX3P56589 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.76□□□□□ -2.53
PEX3P56589 RNU4-63P-201ENST00000411313 118 ntBASIC-0.76□□□□□ -2.53
PEX3P56589 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.76□□□□□ -2.53
PEX3P56589 MIR3179-1-201ENST00000578940 84 ntBASIC-0.76□□□□□ -2.53
PEX3P56589 MIR3179-2-201ENST00000579107 84 ntBASIC-0.76□□□□□ -2.53
PEX3P56589 MIR3179-3-201ENST00000579566 84 ntBASIC-0.76□□□□□ -2.53
PEX3P56589 MIR3179-4-201ENST00000617599 84 ntBASIC-0.76□□□□□ -2.53
PEX3P56589 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.77□□□□□ -2.53
PEX3P56589 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.77□□□□□ -2.53
PEX3P56589 RNA5SP368-201ENST00000364298 116 ntBASIC-0.77□□□□□ -2.53
PEX3P56589 MIR1265-201ENST00000408444 86 ntBASIC-0.77□□□□□ -2.53
PEX3P56589 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.77□□□□□ -2.53
PEX3P56589 RNU6-557P-201ENST00000516842 110 ntBASIC-0.77□□□□□ -2.53
PEX3P56589 MIR548BB-201ENST00000626714 66 ntBASIC-0.77□□□□□ -2.53
PEX3P56589 RNU6-681P-201ENST00000364012 104 ntBASIC-0.78□□□□□ -2.53
PEX3P56589 Y_RNA.291-201ENST00000364886 113 ntBASIC-0.78□□□□□ -2.53
PEX3P56589 SNORA62.4-201ENST00000365504 151 ntBASIC-0.78□□□□□ -2.53
PEX3P56589 RNU6-758P-201ENST00000516292 89 ntBASIC-0.78□□□□□ -2.53
PEX3P56589 AL353803.5-201ENST00000599815 141 ntBASIC-0.78□□□□□ -2.53
PEX3P56589 RNU6-44P-201ENST00000384045 107 ntBASIC-0.79□□□□□ -2.54
PEX3P56589 CYP3A54P-201ENST00000566950 75 ntBASIC-0.79□□□□□ -2.54
PEX3P56589 RNY1P7-201ENST00000384743 110 ntBASIC-0.8□□□□□ -2.54
PEX3P56589 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.8□□□□□ -2.54
PEX3P56589 RNA5SP470-201ENST00000516463 106 ntBASIC-0.8□□□□□ -2.54
PEX3P56589 AC108676.2-201ENST00000605225 163 ntBASIC-0.8□□□□□ -2.54
PEX3P56589 U2.22-201ENST00000636441 106 ntBASIC-0.8□□□□□ -2.54
PEX3P56589 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.81□□□□□ -2.54
PEX3P56589 MIR517B-201ENST00000385102 67 ntBASIC-0.81□□□□□ -2.54
PEX3P56589 MIR1255B2-201ENST00000408618 67 ntBASIC-0.81□□□□□ -2.54
PEX3P56589 AP000533.3-201ENST00000447704 118 ntBASIC-0.81□□□□□ -2.54
PEX3P56589 RNU6-881P-201ENST00000516813 102 ntBASIC-0.81□□□□□ -2.54
PEX3P56589 RNU6-844P-201ENST00000517175 102 ntBASIC-0.81□□□□□ -2.54
PEX3P56589 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.82□□□□□ -2.54
PEX3P56589 AC022137.1-201ENST00000483735 151 ntBASIC-0.82□□□□□ -2.54
PEX3P56589 MIR6888-201ENST00000621977 67 ntBASIC-0.82□□□□□ -2.54
PEX3P56589 Z95118.1-201ENST00000421372 247 ntBASIC-0.83□□□□□ -2.54
PEX3P56589 MIR548AI-201ENST00000579940 88 ntBASIC-0.83□□□□□ -2.54
PEX3P56589 AL445584.3-201ENST00000617173 78 ntBASIC-0.83□□□□□ -2.54
PEX3P56589 RNU6-478P-201ENST00000363904 110 ntBASIC-0.84□□□□□ -2.54
PEX3P56589 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.84□□□□□ -2.54
PEX3P56589 RNU6-168P-201ENST00000516189 101 ntBASIC-0.84□□□□□ -2.54
PEX3P56589 RNU7-154P-201ENST00000516194 62 ntBASIC-0.84□□□□□ -2.54
PEX3P56589 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.84□□□□□ -2.54
PEX3P56589 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.85□□□□□ -2.55
PEX3P56589 MIR124-2-201ENST00000385081 109 ntBASIC-0.85□□□□□ -2.55
PEX3P56589 MT-TQ-201ENST00000387372 72 ntBASIC-0.85□□□□□ -2.55
PEX3P56589 AC074348.1-201ENST00000426503 132 ntBASIC-0.85□□□□□ -2.55
PEX3P56589 RNU6-656P-201ENST00000516785 107 ntBASIC-0.85□□□□□ -2.55
PEX3P56589 RNU6-303P-201ENST00000517091 106 ntBASIC-0.85□□□□□ -2.55
PEX3P56589 AC006160.2-201ENST00000637708 154 ntBASIC-0.85□□□□□ -2.55
PEX3P56589 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.86□□□□□ -2.55
PEX3P56589 RNU6-686P-201ENST00000364839 107 ntBASIC-0.86□□□□□ -2.55
PEX3P56589 RNU6-49P-201ENST00000384256 107 ntBASIC-0.87□□□□□ -2.55
PEX3P56589 Y_RNA.593-201ENST00000410292 98 ntBASIC-0.87□□□□□ -2.55
PEX3P56589 RNA5SP89-201ENST00000410300 108 ntBASIC-0.87□□□□□ -2.55
PEX3P56589 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.87□□□□□ -2.55
PEX3P56589 RNA5SP395-201ENST00000516567 118 ntBASIC-0.87□□□□□ -2.55
PEX3P56589 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.87□□□□□ -2.55
PEX3P56589 Y_RNA.17-201ENST00000362433 111 ntBASIC-0.88□□□□□ -2.55
PEX3P56589 SNORD114-25-201ENST00000363742 72 ntBASIC-0.88□□□□□ -2.55
PEX3P56589 SNORD95.1-201ENST00000364099 68 ntBASIC-0.88□□□□□ -2.55
PEX3P56589 SNORD18.2-201ENST00000459604 70 ntBASIC-0.88□□□□□ -2.55
PEX3P56589 RNU6-330P-201ENST00000363015 107 ntBASIC-0.89□□□□□ -2.55
PEX3P56589 MIR519A2-201ENST00000384990 87 ntBASIC-0.89□□□□□ -2.55
PEX3P56589 RNU6-129P-201ENST00000391022 107 ntBASIC-0.89□□□□□ -2.55
PEX3P56589 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.89□□□□□ -2.55
PEX3P56589 RNU6-1131P-201ENST00000364955 107 ntBASIC-0.9□□□□□ -2.55
PEX3P56589 SCARNA17-201ENST00000516183 144 ntBASIC-0.9□□□□□ -2.55
PEX3P56589 RNU6-153P-201ENST00000364422 104 ntBASIC-0.91□□□□□ -2.56
PEX3P56589 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.91□□□□□ -2.56
PEX3P56589 U2.7-201ENST00000619197 100 ntBASIC-0.91□□□□□ -2.56
PEX3P56589 SNORA8.1-201ENST00000384250 140 ntBASIC-0.92□□□□□ -2.56
PEX3P56589 AL021921.1-201ENST00000442774 93 ntBASIC-0.92□□□□□ -2.56
PEX3P56589 RNU6-518P-201ENST00000516056 96 ntBASIC-0.92□□□□□ -2.56
PEX3P56589 snoMBII-202.2-201ENST00000517263 86 ntBASIC-0.92□□□□□ -2.56
PEX3P56589 RNU6-645P-201ENST00000364649 106 ntBASIC-0.93□□□□□ -2.56
PEX3P56589 RNU6-431P-201ENST00000383874 107 ntBASIC-0.93□□□□□ -2.56
PEX3P56589 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.93□□□□□ -2.56
PEX3P56589 Y_RNA.607-201ENST00000410597 98 ntBASIC-0.93□□□□□ -2.56
PEX3P56589 MIR3675-201ENST00000583661 73 ntBASIC-0.93□□□□□ -2.56
PEX3P56589 MIR6086-201ENST00000638065 55 ntBASIC-0.93□□□□□ -2.56
PEX3P56589 SNORD114-17-201ENST00000364699 75 ntBASIC-0.94□□□□□ -2.56
PEX3P56589 MIR147A-201ENST00000385079 72 ntBASIC-0.94□□□□□ -2.56
PEX3P56589 RNA5SP25-201ENST00000410815 110 ntBASIC-0.94□□□□□ -2.56
PEX3P56589 AL500527.2-201ENST00000454105 95 ntBASIC-0.94□□□□□ -2.56
PEX3P56589 Y_RNA.73-201ENST00000362910 113 ntBASIC-0.95□□□□□ -2.56
PEX3P56589 RNU6-1134P-201ENST00000365156 101 ntBASIC-0.95□□□□□ -2.56
PEX3P56589 SNORD64-201ENST00000386683 67 ntBASIC-0.95□□□□□ -2.56
PEX3P56589 MIR196A1-201ENST00000388006 70 ntBASIC-0.95□□□□□ -2.56
PEX3P56589 MIR5588-201ENST00000581890 63 ntBASIC-0.95□□□□□ -2.56
PEX3P56589 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.96□□□□□ -2.56
PEX3P56589 RNU6-979P-201ENST00000383896 107 ntBASIC-0.96□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 194.9 ms