Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 MIR519C-201ENST00000385053 87 ntBASIC-1.33□□□□□ -2.62
BRCA1P38398 RNU6-907P-201ENST00000390924 102 ntBASIC-1.33□□□□□ -2.62
BRCA1P38398 AL035461.1-201ENST00000421490 332 ntBASIC-1.33□□□□□ -2.62
BRCA1P38398 AC026421.1-201ENST00000519101 163 ntBASIC-1.33□□□□□ -2.62
BRCA1P38398 MIR3675-201ENST00000583661 73 ntBASIC-1.33□□□□□ -2.62
BRCA1P38398 AL353691.2-201ENST00000443795 59 ntBASIC-1.34□□□□□ -2.62
BRCA1P38398 SNORD63.1-201ENST00000516178 80 ntBASIC-1.34□□□□□ -2.62
BRCA1P38398 HLA-S-202ENST00000425174 53 ntBASIC-1.35□□□□□ -2.62
BRCA1P38398 RNU6-656P-201ENST00000516785 107 ntBASIC-1.35□□□□□ -2.62
BRCA1P38398 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.35□□□□□ -2.63
BRCA1P38398 SNORD90-201ENST00000391145 111 ntBASIC-1.35□□□□□ -2.63
BRCA1P38398 RNU6-886P-201ENST00000384319 105 ntBASIC-1.36□□□□□ -2.63
BRCA1P38398 RNU2-51P-201ENST00000410708 197 ntBASIC-1.36□□□□□ -2.63
BRCA1P38398 RNU6-340P-201ENST00000364005 107 ntBASIC-1.37□□□□□ -2.63
BRCA1P38398 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.37□□□□□ -2.63
BRCA1P38398 AP002795.1-201ENST00000534879 84 ntBASIC-1.37□□□□□ -2.63
BRCA1P38398 SNORD115-37-201ENST00000363768 82 ntBASIC-1.37□□□□□ -2.63
BRCA1P38398 RNU6-746P-201ENST00000384112 109 ntBASIC-1.37□□□□□ -2.63
BRCA1P38398 MIR29B1-201ENST00000385015 81 ntBASIC-1.37□□□□□ -2.63
BRCA1P38398 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.37□□□□□ -2.63
BRCA1P38398 RNU6-1212P-201ENST00000517023 104 ntBASIC-1.37□□□□□ -2.63
BRCA1P38398 AC132825.6-201ENST00000638861 357 ntBASIC-1.37□□□□□ -2.63
BRCA1P38398 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.38□□□□□ -2.63
BRCA1P38398 RNU7-134P-201ENST00000458997 64 ntBASIC-1.38□□□□□ -2.63
BRCA1P38398 RNU6-752P-201ENST00000516376 102 ntBASIC-1.38□□□□□ -2.63
BRCA1P38398 SNORD115-27-201ENST00000364430 82 ntBASIC-1.39□□□□□ -2.63
BRCA1P38398 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.39□□□□□ -2.63
BRCA1P38398 AL021921.1-201ENST00000442774 93 ntBASIC-1.39□□□□□ -2.63
BRCA1P38398 MIR4770-201ENST00000579149 58 ntBASIC-1.39□□□□□ -2.63
BRCA1P38398 RNU6-774P-201ENST00000363238 107 ntBASIC-1.39□□□□□ -2.63
BRCA1P38398 RNU6-659P-201ENST00000516454 104 ntBASIC-1.39□□□□□ -2.63
BRCA1P38398 MIR5591-201ENST00000578248 65 ntBASIC-1.39□□□□□ -2.63
BRCA1P38398 SNORD115-22-201ENST00000364456 82 ntBASIC-1.4□□□□□ -2.63
BRCA1P38398 MIR8485-201ENST00000401372 91 ntBASIC-1.4□□□□□ -2.63
BRCA1P38398 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.4□□□□□ -2.63
BRCA1P38398 RNU4-61P-201ENST00000411243 107 ntBASIC-1.4□□□□□ -2.63
BRCA1P38398 RNU6-904P-201ENST00000516206 101 ntBASIC-1.4□□□□□ -2.63
BRCA1P38398 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.4□□□□□ -2.63
BRCA1P38398 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.4□□□□□ -2.63
BRCA1P38398 MIR507-201ENST00000385234 94 ntBASIC-1.41□□□□□ -2.63
BRCA1P38398 AL450471.1-201ENST00000447509 127 ntBASIC-1.41□□□□□ -2.63
BRCA1P38398 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.41□□□□□ -2.63
BRCA1P38398 U6.81-201ENST00000612550 106 ntBASIC-1.41□□□□□ -2.63
BRCA1P38398 RNU6-479P-201ENST00000516348 105 ntBASIC-1.41□□□□□ -2.64
BRCA1P38398 U7.3-201ENST00000616123 62 ntBASIC-1.41□□□□□ -2.64
BRCA1P38398 U6.95-201ENST00000636931 70 ntBASIC-1.41□□□□□ -2.64
BRCA1P38398 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.41□□□□□ -2.64
BRCA1P38398 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.42□□□□□ -2.64
BRCA1P38398 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.42□□□□□ -2.64
BRCA1P38398 SNORD116-21-201ENST00000384507 92 ntBASIC-1.42□□□□□ -2.64
BRCA1P38398 MIR590-201ENST00000385008 97 ntBASIC-1.42□□□□□ -2.64
BRCA1P38398 SNORD77.2-201ENST00000391045 68 ntBASIC-1.42□□□□□ -2.64
BRCA1P38398 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.42□□□□□ -2.64
BRCA1P38398 MIR6129-201ENST00000616087 109 ntBASIC-1.42□□□□□ -2.64
BRCA1P38398 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.43□□□□□ -2.64
BRCA1P38398 RNU6-959P-201ENST00000384671 107 ntBASIC-1.43□□□□□ -2.64
BRCA1P38398 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.43□□□□□ -2.64
BRCA1P38398 AC018880.2-201ENST00000414265 201 ntBASIC-1.43□□□□□ -2.64
BRCA1P38398 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.43□□□□□ -2.64
BRCA1P38398 RNU7-153P-201ENST00000516455 62 ntBASIC-1.43□□□□□ -2.64
BRCA1P38398 MIR2052-201ENST00000636055 55 ntBASIC-1.43□□□□□ -2.64
BRCA1P38398 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.43□□□□□ -2.64
BRCA1P38398 RNY1P5-201ENST00000383890 115 ntBASIC-1.43□□□□□ -2.64
BRCA1P38398 RNU6-106P-201ENST00000384405 107 ntBASIC-1.43□□□□□ -2.64
BRCA1P38398 MIR1246-201ENST00000636535 73 ntBASIC-1.43□□□□□ -2.64
BRCA1P38398 SNORD19-201ENST00000391191 68 ntBASIC-1.44□□□□□ -2.64
BRCA1P38398 RNU6-346P-201ENST00000516288 111 ntBASIC-1.44□□□□□ -2.64
BRCA1P38398 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.44□□□□□ -2.64
BRCA1P38398 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.44□□□□□ -2.64
BRCA1P38398 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.44□□□□□ -2.64
BRCA1P38398 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.44□□□□□ -2.64
BRCA1P38398 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.45□□□□□ -2.64
BRCA1P38398 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.45□□□□□ -2.64
BRCA1P38398 RNU6-246P-201ENST00000384702 107 ntBASIC-1.45□□□□□ -2.64
BRCA1P38398 AL078595.1-201ENST00000404458 226 ntBASIC-1.46□□□□□ -2.64
BRCA1P38398 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.46□□□□□ -2.64
BRCA1P38398 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.46□□□□□ -2.64
BRCA1P38398 RNU6-164P-201ENST00000364604 103 ntBASIC-1.46□□□□□ -2.64
BRCA1P38398 Y_RNA.464-201ENST00000384282 110 ntBASIC-1.48□□□□□ -2.65
BRCA1P38398 MIR889-201ENST00000401280 79 ntBASIC-1.48□□□□□ -2.65
BRCA1P38398 RNU6-162P-201ENST00000516228 103 ntBASIC-1.48□□□□□ -2.65
BRCA1P38398 MIR4520-1-201ENST00000582609 70 ntBASIC-1.48□□□□□ -2.65
BRCA1P38398 RNU6-880P-201ENST00000384526 107 ntBASIC-1.48□□□□□ -2.65
BRCA1P38398 MIR548Q-201ENST00000408404 100 ntBASIC-1.48□□□□□ -2.65
BRCA1P38398 RNU6-518P-201ENST00000516056 96 ntBASIC-1.48□□□□□ -2.65
BRCA1P38398 SNORD116-22-201ENST00000384430 92 ntBASIC-1.49□□□□□ -2.65
BRCA1P38398 MTATP8P2-201ENST00000435212 202 ntBASIC-1.49□□□□□ -2.65
BRCA1P38398 RNU6-704P-201ENST00000364162 103 ntBASIC-1.5□□□□□ -2.65
BRCA1P38398 U2.7-201ENST00000619197 100 ntBASIC-1.5□□□□□ -2.65
BRCA1P38398 MIR5683-201ENST00000636514 76 ntBASIC-1.5□□□□□ -2.65
BRCA1P38398 RNA5SP26-201ENST00000362406 119 ntBASIC-1.5□□□□□ -2.65
BRCA1P38398 SNORA19-201ENST00000384737 128 ntBASIC-1.5□□□□□ -2.65
BRCA1P38398 RNU6-696P-201ENST00000390834 107 ntBASIC-1.5□□□□□ -2.65
BRCA1P38398 RNU6-794P-201ENST00000517261 64 ntBASIC-1.5□□□□□ -2.65
BRCA1P38398 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.51□□□□□ -2.65
BRCA1P38398 RNA5SP180-201ENST00000516181 101 ntBASIC-1.51□□□□□ -2.65
BRCA1P38398 RNU7-174P-201ENST00000516248 59 ntBASIC-1.51□□□□□ -2.65
BRCA1P38398 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.51□□□□□ -2.65
BRCA1P38398 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.52□□□□□ -2.65
BRCA1P38398 MIR1297-201ENST00000637311 77 ntBASIC-1.52□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms