Protein–RNA interactions for Protein: P30531

SLC6A1, Sodium- and chloride-dependent GABA transporter 1, humanhuman

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1P30531 MIR1285-2-201ENST00000408311 88 ntBASIC-1.57□□□□□ -2.66
SLC6A1P30531 MIR1236-201ENST00000408340 102 ntBASIC-1.57□□□□□ -2.66
SLC6A1P30531 AL021921.1-201ENST00000442774 93 ntBASIC-1.57□□□□□ -2.66
SLC6A1P30531 RNU6-659P-201ENST00000516454 104 ntBASIC-1.57□□□□□ -2.66
SLC6A1P30531 MIR365A-201ENST00000362260 87 ntBASIC-1.58□□□□□ -2.66
SLC6A1P30531 RNU6-880P-201ENST00000384526 107 ntBASIC-1.58□□□□□ -2.66
SLC6A1P30531 MIR889-201ENST00000401280 79 ntBASIC-1.58□□□□□ -2.66
SLC6A1P30531 RNU6-732P-201ENST00000516033 103 ntBASIC-1.58□□□□□ -2.66
SLC6A1P30531 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.58□□□□□ -2.66
SLC6A1P30531 RNU6-537P-201ENST00000517277 103 ntBASIC-1.58□□□□□ -2.66
SLC6A1P30531 MIR5591-201ENST00000578248 65 ntBASIC-1.58□□□□□ -2.66
SLC6A1P30531 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.59□□□□□ -2.66
SLC6A1P30531 MIR527-201ENST00000385244 85 ntBASIC-1.59□□□□□ -2.66
SLC6A1P30531 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.59□□□□□ -2.66
SLC6A1P30531 AL450471.1-201ENST00000447509 127 ntBASIC-1.59□□□□□ -2.66
SLC6A1P30531 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.59□□□□□ -2.66
SLC6A1P30531 MIR507-201ENST00000385234 94 ntBASIC-1.6□□□□□ -2.67
SLC6A1P30531 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.6□□□□□ -2.67
SLC6A1P30531 RNU7-61P-201ENST00000515897 61 ntBASIC-1.6□□□□□ -2.67
SLC6A1P30531 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.6□□□□□ -2.67
SLC6A1P30531 RNU6-346P-201ENST00000516288 111 ntBASIC-1.6□□□□□ -2.67
SLC6A1P30531 RNU6-412P-201ENST00000516434 106 ntBASIC-1.6□□□□□ -2.67
SLC6A1P30531 RNU7-153P-201ENST00000516455 62 ntBASIC-1.6□□□□□ -2.67
SLC6A1P30531 MIR548AG1-201ENST00000579932 66 ntBASIC-1.6□□□□□ -2.67
SLC6A1P30531 MIR6129-201ENST00000616087 109 ntBASIC-1.6□□□□□ -2.67
SLC6A1P30531 RNU6-340P-201ENST00000364005 107 ntBASIC-1.61□□□□□ -2.67
SLC6A1P30531 RNU6-226P-201ENST00000363778 107 ntBASIC-1.62□□□□□ -2.67
SLC6A1P30531 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.62□□□□□ -2.67
SLC6A1P30531 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.62□□□□□ -2.67
SLC6A1P30531 RNU6-246P-201ENST00000384702 107 ntBASIC-1.62□□□□□ -2.67
SLC6A1P30531 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.62□□□□□ -2.67
SLC6A1P30531 AP002795.1-201ENST00000534879 84 ntBASIC-1.62□□□□□ -2.67
SLC6A1P30531 MIR4520-1-201ENST00000582609 70 ntBASIC-1.62□□□□□ -2.67
SLC6A1P30531 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.62□□□□□ -2.67
SLC6A1P30531 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.62□□□□□ -2.67
SLC6A1P30531 U4.2-201ENST00000618561 85 ntBASIC-1.62□□□□□ -2.67
SLC6A1P30531 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.62□□□□□ -2.67
SLC6A1P30531 Y_RNA.506-201ENST00000384494 102 ntBASIC-1.63□□□□□ -2.67
SLC6A1P30531 SNORD116-21-201ENST00000384507 92 ntBASIC-1.63□□□□□ -2.67
SLC6A1P30531 AL035461.1-201ENST00000421490 332 ntBASIC-1.63□□□□□ -2.67
SLC6A1P30531 RNU7-88P-201ENST00000458752 63 ntBASIC-1.63□□□□□ -2.67
SLC6A1P30531 RNU6-656P-201ENST00000516785 107 ntBASIC-1.63□□□□□ -2.67
SLC6A1P30531 RNU6-1212P-201ENST00000517023 104 ntBASIC-1.63□□□□□ -2.67
SLC6A1P30531 RNU6-158P-201ENST00000517104 100 ntBASIC-1.63□□□□□ -2.67
SLC6A1P30531 U7.5-201ENST00000517224 61 ntBASIC-1.63□□□□□ -2.67
SLC6A1P30531 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.64□□□□□ -2.67
SLC6A1P30531 MIR590-201ENST00000385008 97 ntBASIC-1.64□□□□□ -2.67
SLC6A1P30531 SNORD114-3-201ENST00000364969 75 ntBASIC-1.65□□□□□ -2.67
SLC6A1P30531 RNY1P5-201ENST00000383890 115 ntBASIC-1.65□□□□□ -2.67
SLC6A1P30531 Y_RNA.464-201ENST00000384282 110 ntBASIC-1.65□□□□□ -2.67
SLC6A1P30531 SNORD19-201ENST00000391191 68 ntBASIC-1.65□□□□□ -2.67
SLC6A1P30531 RNU6-162P-201ENST00000516228 103 ntBASIC-1.65□□□□□ -2.67
SLC6A1P30531 U2.7-201ENST00000619197 100 ntBASIC-1.65□□□□□ -2.67
SLC6A1P30531 AC091912.2-201ENST00000624798 167 ntBASIC-1.65□□□□□ -2.67
SLC6A1P30531 RNU6-681P-201ENST00000364012 104 ntBASIC-1.66□□□□□ -2.68
SLC6A1P30531 SNORD115-27-201ENST00000364430 82 ntBASIC-1.66□□□□□ -2.68
SLC6A1P30531 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.66□□□□□ -2.68
SLC6A1P30531 RNU6-255P-201ENST00000516957 105 ntBASIC-1.66□□□□□ -2.68
SLC6A1P30531 MIR4441-201ENST00000582623 100 ntBASIC-1.66□□□□□ -2.68
SLC6A1P30531 U7.3-201ENST00000616123 62 ntBASIC-1.66□□□□□ -2.68
SLC6A1P30531 MIR5683-201ENST00000636514 76 ntBASIC-1.66□□□□□ -2.68
SLC6A1P30531 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.67□□□□□ -2.68
SLC6A1P30531 RNU6-774P-201ENST00000363238 107 ntBASIC-1.67□□□□□ -2.68
SLC6A1P30531 SNORD77.2-201ENST00000391045 68 ntBASIC-1.67□□□□□ -2.68
SLC6A1P30531 MIR4770-201ENST00000579149 58 ntBASIC-1.67□□□□□ -2.68
SLC6A1P30531 MIR4490-201ENST00000582647 84 ntBASIC-1.67□□□□□ -2.68
SLC6A1P30531 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.68□□□□□ -2.68
SLC6A1P30531 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.68□□□□□ -2.68
SLC6A1P30531 RNU6-807P-201ENST00000516805 107 ntBASIC-1.68□□□□□ -2.68
SLC6A1P30531 MIR6502-201ENST00000617296 76 ntBASIC-1.68□□□□□ -2.68
SLC6A1P30531 MIR6874-201ENST00000635894 71 ntBASIC-1.68□□□□□ -2.68
SLC6A1P30531 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.69□□□□□ -2.68
SLC6A1P30531 RNU6-164P-201ENST00000364604 103 ntBASIC-1.69□□□□□ -2.68
SLC6A1P30531 MIR1302-5-201ENST00000408164 150 ntBASIC-1.69□□□□□ -2.68
SLC6A1P30531 RNA5SP180-201ENST00000516181 101 ntBASIC-1.69□□□□□ -2.68
SLC6A1P30531 SNORD116-14-201ENST00000383894 92 ntBASIC-1.7□□□□□ -2.68
SLC6A1P30531 SNORD116-17-201ENST00000383929 92 ntBASIC-1.7□□□□□ -2.68
SLC6A1P30531 SNORD116-15-201ENST00000384445 92 ntBASIC-1.7□□□□□ -2.68
SLC6A1P30531 SNORD116-19-201ENST00000384729 92 ntBASIC-1.7□□□□□ -2.68
SLC6A1P30531 MIR1207-201ENST00000408249 87 ntBASIC-1.7□□□□□ -2.68
SLC6A1P30531 RNU6-109P-201ENST00000516364 107 ntBASIC-1.7□□□□□ -2.68
SLC6A1P30531 RNU6-184P-201ENST00000516514 107 ntBASIC-1.7□□□□□ -2.68
SLC6A1P30531 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.7□□□□□ -2.68
SLC6A1P30531 MIR519C-201ENST00000385053 87 ntBASIC-1.71□□□□□ -2.68
SLC6A1P30531 MIR1246-201ENST00000636535 73 ntBASIC-1.71□□□□□ -2.68
SLC6A1P30531 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.72□□□□□ -2.68
SLC6A1P30531 RNU6-907P-201ENST00000390924 102 ntBASIC-1.72□□□□□ -2.68
SLC6A1P30531 RPL35AP4-201ENST00000412007 102 ntBASIC-1.72□□□□□ -2.68
SLC6A1P30531 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.72□□□□□ -2.68
SLC6A1P30531 AC099654.10-201ENST00000640395 161 ntBASIC-1.72□□□□□ -2.68
SLC6A1P30531 RNU6-645P-201ENST00000364649 106 ntBASIC-1.73□□□□□ -2.69
SLC6A1P30531 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.73□□□□□ -2.69
SLC6A1P30531 RNU6-478P-201ENST00000363904 110 ntBASIC-1.74□□□□□ -2.69
SLC6A1P30531 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.74□□□□□ -2.69
SLC6A1P30531 AL078595.1-201ENST00000404458 226 ntBASIC-1.74□□□□□ -2.69
SLC6A1P30531 RNU6-554P-201ENST00000410466 106 ntBASIC-1.74□□□□□ -2.69
SLC6A1P30531 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.75□□□□□ -2.69
SLC6A1P30531 MIR548C-201ENST00000384815 97 ntBASIC-1.75□□□□□ -2.69
SLC6A1P30531 AC090616.4-201ENST00000448026 115 ntBASIC-1.75□□□□□ -2.69
SLC6A1P30531 RNU6-106P-201ENST00000384405 107 ntBASIC-1.76□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 7.3 ms