Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 Y_RNA.29-201ENST00000362570 113 ntBASIC-2.16□□□□□ -2.76
HLA-DMBP28068 MIR548Q-201ENST00000408404 100 ntBASIC-2.16□□□□□ -2.76
HLA-DMBP28068 MIR4756-201ENST00000577874 78 ntBASIC-2.16□□□□□ -2.76
HLA-DMBP28068 SNORD58A-201ENST00000383875 65 ntBASIC-2.17□□□□□ -2.76
HLA-DMBP28068 RNU6-861P-201ENST00000516745 106 ntBASIC-2.17□□□□□ -2.76
HLA-DMBP28068 Y_RNA.701-201ENST00000516812 110 ntBASIC-2.17□□□□□ -2.76
HLA-DMBP28068 U2.7-201ENST00000619197 100 ntBASIC-2.17□□□□□ -2.76
HLA-DMBP28068 RNU6-682P-201ENST00000363843 106 ntBASIC-2.18□□□□□ -2.76
HLA-DMBP28068 Y_RNA.630-201ENST00000411370 108 ntBASIC-2.18□□□□□ -2.76
HLA-DMBP28068 RNU6-656P-201ENST00000516785 107 ntBASIC-2.18□□□□□ -2.76
HLA-DMBP28068 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-2.18□□□□□ -2.76
HLA-DMBP28068 AC012531.4-201ENST00000616509 177 ntBASIC-2.18□□□□□ -2.76
HLA-DMBP28068 RNU6-478P-201ENST00000363904 110 ntBASIC-2.19□□□□□ -2.76
HLA-DMBP28068 RNY4P7-201ENST00000364600 96 ntBASIC-2.19□□□□□ -2.76
HLA-DMBP28068 Y_RNA.459-201ENST00000384251 102 ntBASIC-2.19□□□□□ -2.76
HLA-DMBP28068 RNU6-972P-201ENST00000391208 107 ntBASIC-2.19□□□□□ -2.76
HLA-DMBP28068 RNU7-120P-201ENST00000459334 63 ntBASIC-2.19□□□□□ -2.76
HLA-DMBP28068 RNU6-795P-201ENST00000516323 103 ntBASIC-2.19□□□□□ -2.76
HLA-DMBP28068 Y_RNA.705-201ENST00000516862 110 ntBASIC-2.19□□□□□ -2.76
HLA-DMBP28068 Y_RNA.297-201ENST00000364950 91 ntBASIC-2.2□□□□□ -2.76
HLA-DMBP28068 RNU6-841P-201ENST00000383872 107 ntBASIC-2.21□□□□□ -2.76
HLA-DMBP28068 SNORD116-18-201ENST00000383961 92 ntBASIC-2.21□□□□□ -2.76
HLA-DMBP28068 MIR569-201ENST00000385228 96 ntBASIC-2.21□□□□□ -2.76
HLA-DMBP28068 Y_RNA.190-201ENST00000363964 101 ntBASIC-2.22□□□□□ -2.76
HLA-DMBP28068 RNU6-340P-201ENST00000364005 107 ntBASIC-2.22□□□□□ -2.76
HLA-DMBP28068 MTCYBP9-201ENST00000431021 303 ntBASIC-2.22□□□□□ -2.76
HLA-DMBP28068 AL450471.1-201ENST00000447509 127 ntBASIC-2.22□□□□□ -2.76
HLA-DMBP28068 RNU6-772P-201ENST00000516042 105 ntBASIC-2.22□□□□□ -2.76
HLA-DMBP28068 RNU6-608P-201ENST00000383927 104 ntBASIC-2.23□□□□□ -2.77
HLA-DMBP28068 MIR1236-201ENST00000408340 102 ntBASIC-2.23□□□□□ -2.77
HLA-DMBP28068 RNU6-887P-201ENST00000410660 100 ntBASIC-2.23□□□□□ -2.77
HLA-DMBP28068 RNU6-118P-201ENST00000516552 102 ntBASIC-2.23□□□□□ -2.77
HLA-DMBP28068 MIR3123-201ENST00000583417 75 ntBASIC-2.23□□□□□ -2.77
HLA-DMBP28068 AC008737.2-201ENST00000599446 118 ntBASIC-2.23□□□□□ -2.77
HLA-DMBP28068 AL157777.2-201ENST00000258070 137 ntBASIC-2.24□□□□□ -2.77
HLA-DMBP28068 RNU6-681P-201ENST00000364012 104 ntBASIC-2.24□□□□□ -2.77
HLA-DMBP28068 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.24□□□□□ -2.77
HLA-DMBP28068 RNU6-394P-201ENST00000410735 107 ntBASIC-2.24□□□□□ -2.77
HLA-DMBP28068 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.24□□□□□ -2.77
HLA-DMBP28068 Y_RNA.400-201ENST00000383963 111 ntBASIC-2.25□□□□□ -2.77
HLA-DMBP28068 RNU6-696P-201ENST00000390834 107 ntBASIC-2.25□□□□□ -2.77
HLA-DMBP28068 MIR1302-3-201ENST00000408128 138 ntBASIC-2.25□□□□□ -2.77
HLA-DMBP28068 AL035461.1-201ENST00000421490 332 ntBASIC-2.25□□□□□ -2.77
HLA-DMBP28068 Y_RNA.649-201ENST00000459077 103 ntBASIC-2.25□□□□□ -2.77
HLA-DMBP28068 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.25□□□□□ -2.77
HLA-DMBP28068 Y_RNA.96-201ENST00000363092 109 ntBASIC-2.26□□□□□ -2.77
HLA-DMBP28068 RNU6-458P-201ENST00000384179 107 ntBASIC-2.26□□□□□ -2.77
HLA-DMBP28068 MIR568-201ENST00000385036 95 ntBASIC-2.26□□□□□ -2.77
HLA-DMBP28068 RNU6-980P-201ENST00000516925 103 ntBASIC-2.26□□□□□ -2.77
HLA-DMBP28068 MIR3144-201ENST00000579460 79 ntBASIC-2.26□□□□□ -2.77
HLA-DMBP28068 MIR548AM-201ENST00000584298 74 ntBASIC-2.26□□□□□ -2.77
HLA-DMBP28068 U6.58-201ENST00000613107 107 ntBASIC-2.26□□□□□ -2.77
HLA-DMBP28068 SNORD116-10-201ENST00000363791 102 ntBASIC-2.27□□□□□ -2.77
HLA-DMBP28068 Y_RNA.236-201ENST00000364427 111 ntBASIC-2.27□□□□□ -2.77
HLA-DMBP28068 Y_RNA.403-201ENST00000383977 101 ntBASIC-2.27□□□□□ -2.77
HLA-DMBP28068 MIR606-201ENST00000384851 96 ntBASIC-2.27□□□□□ -2.77
HLA-DMBP28068 SNORD54-201ENST00000459159 67 ntBASIC-2.27□□□□□ -2.77
HLA-DMBP28068 MIR23C-201ENST00000579846 100 ntBASIC-2.27□□□□□ -2.77
HLA-DMBP28068 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-2.27□□□□□ -2.77
HLA-DMBP28068 Y_RNA.307-201ENST00000365022 117 ntBASIC-2.28□□□□□ -2.77
HLA-DMBP28068 MIR548A3-201ENST00000385297 97 ntBASIC-2.28□□□□□ -2.77
HLA-DMBP28068 RNU6-630P-201ENST00000391258 106 ntBASIC-2.28□□□□□ -2.77
HLA-DMBP28068 RNU6-1152P-201ENST00000384576 107 ntBASIC-2.29□□□□□ -2.78
HLA-DMBP28068 Y_RNA.609-201ENST00000410669 89 ntBASIC-2.29□□□□□ -2.78
HLA-DMBP28068 SCARNA23-201ENST00000516060 130 ntBASIC-2.29□□□□□ -2.78
HLA-DMBP28068 RNU6-537P-201ENST00000517277 103 ntBASIC-2.29□□□□□ -2.78
HLA-DMBP28068 Y_RNA.74-201ENST00000362911 99 ntBASIC-2.3□□□□□ -2.78
HLA-DMBP28068 RNU6-645P-201ENST00000364649 106 ntBASIC-2.3□□□□□ -2.78
HLA-DMBP28068 MIR520D-201ENST00000385002 87 ntBASIC-2.31□□□□□ -2.78
HLA-DMBP28068 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.32□□□□□ -2.78
HLA-DMBP28068 RNU6-904P-201ENST00000516206 101 ntBASIC-2.32□□□□□ -2.78
HLA-DMBP28068 RNU6-1262P-201ENST00000516217 96 ntBASIC-2.32□□□□□ -2.78
HLA-DMBP28068 RNU7-174P-201ENST00000516248 59 ntBASIC-2.32□□□□□ -2.78
HLA-DMBP28068 AC120024.2-201ENST00000576526 175 ntBASIC-2.32□□□□□ -2.78
HLA-DMBP28068 MIR429-201ENST00000362106 83 ntBASIC-2.33□□□□□ -2.78
HLA-DMBP28068 RNU6-563P-201ENST00000364872 108 ntBASIC-2.33□□□□□ -2.78
HLA-DMBP28068 RNU6-738P-201ENST00000384531 106 ntBASIC-2.33□□□□□ -2.78
HLA-DMBP28068 SNORD77.2-201ENST00000391045 68 ntBASIC-2.33□□□□□ -2.78
HLA-DMBP28068 MTND4LP9-201ENST00000427694 174 ntBASIC-2.33□□□□□ -2.78
HLA-DMBP28068 RNU7-153P-201ENST00000516455 62 ntBASIC-2.33□□□□□ -2.78
HLA-DMBP28068 MIR3139-201ENST00000579145 76 ntBASIC-2.33□□□□□ -2.78
HLA-DMBP28068 RNA5SP405-201ENST00000363059 114 ntBASIC-2.34□□□□□ -2.78
HLA-DMBP28068 Y_RNA.281-201ENST00000364774 94 ntBASIC-2.34□□□□□ -2.78
HLA-DMBP28068 RNU4-88P-201ENST00000411220 86 ntBASIC-2.34□□□□□ -2.78
HLA-DMBP28068 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.35□□□□□ -2.79
HLA-DMBP28068 Y_RNA.282-201ENST00000364793 102 ntBASIC-2.35□□□□□ -2.79
HLA-DMBP28068 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.35□□□□□ -2.79
HLA-DMBP28068 RNU6-804P-201ENST00000384286 107 ntBASIC-2.35□□□□□ -2.79
HLA-DMBP28068 MIR548C-201ENST00000384815 97 ntBASIC-2.35□□□□□ -2.79
HLA-DMBP28068 RNU6-258P-201ENST00000390884 101 ntBASIC-2.35□□□□□ -2.79
HLA-DMBP28068 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.35□□□□□ -2.79
HLA-DMBP28068 MIR3914-2-201ENST00000637339 95 ntBASIC-2.35□□□□□ -2.79
HLA-DMBP28068 Y_RNA.264-201ENST00000364665 102 ntBASIC-2.36□□□□□ -2.79
HLA-DMBP28068 Y_RNA.398-201ENST00000383952 99 ntBASIC-2.36□□□□□ -2.79
HLA-DMBP28068 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.36□□□□□ -2.79
HLA-DMBP28068 RNU6-426P-201ENST00000516464 97 ntBASIC-2.36□□□□□ -2.79
HLA-DMBP28068 Y_RNA.109-201ENST00000363215 102 ntBASIC-2.37□□□□□ -2.79
HLA-DMBP28068 RNU6-194P-201ENST00000363862 105 ntBASIC-2.37□□□□□ -2.79
HLA-DMBP28068 RNU6-587P-201ENST00000391282 106 ntBASIC-2.37□□□□□ -2.79
HLA-DMBP28068 Y_RNA.193-201ENST00000363979 102 ntBASIC-2.38□□□□□ -2.79
Retrieved 100 of 98,524 protein–RNA pairs in 219.5 ms