Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 TMSB4XP3-201ENST00000445144 114 ntBASIC-0.37□□□□□ -2.47
COL5A3P25940 SNORD22.1-201ENST00000516331 125 ntBASIC-0.37□□□□□ -2.47
COL5A3P25940 SNORA40.13-201ENST00000516379 120 ntBASIC-0.37□□□□□ -2.47
COL5A3P25940 RNA5SP169-201ENST00000517268 117 ntBASIC-0.37□□□□□ -2.47
COL5A3P25940 MIR3179-1-201ENST00000578940 84 ntBASIC-0.37□□□□□ -2.47
COL5A3P25940 MIR3179-2-201ENST00000579107 84 ntBASIC-0.37□□□□□ -2.47
COL5A3P25940 MIR3179-3-201ENST00000579566 84 ntBASIC-0.37□□□□□ -2.47
COL5A3P25940 MIR3179-4-201ENST00000617599 84 ntBASIC-0.37□□□□□ -2.47
COL5A3P25940 U6.96-201ENST00000636425 70 ntBASIC-0.37□□□□□ -2.47
COL5A3P25940 RNU6-208P-201ENST00000362431 107 ntBASIC-0.38□□□□□ -2.47
COL5A3P25940 SNORD115-37-201ENST00000363768 82 ntBASIC-0.38□□□□□ -2.47
COL5A3P25940 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.38□□□□□ -2.47
COL5A3P25940 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.38□□□□□ -2.47
COL5A3P25940 SNORD20-201ENST00000384550 80 ntBASIC-0.38□□□□□ -2.47
COL5A3P25940 RNU6-721P-201ENST00000410155 105 ntBASIC-0.38□□□□□ -2.47
COL5A3P25940 Y_RNA.629-201ENST00000411368 105 ntBASIC-0.38□□□□□ -2.47
COL5A3P25940 MIR450A1-201ENST00000362262 91 ntBASIC-0.38□□□□□ -2.47
COL5A3P25940 RNU5F-1-201ENST00000362507 117 ntBASIC-0.38□□□□□ -2.47
COL5A3P25940 SNORD114-14-201ENST00000362723 75 ntBASIC-0.38□□□□□ -2.47
COL5A3P25940 RNU6-1081P-201ENST00000384537 107 ntBASIC-0.38□□□□□ -2.47
COL5A3P25940 MIR1255B2-201ENST00000408618 67 ntBASIC-0.38□□□□□ -2.47
COL5A3P25940 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.38□□□□□ -2.47
COL5A3P25940 RNU6-592P-201ENST00000411333 103 ntBASIC-0.38□□□□□ -2.47
COL5A3P25940 AP000533.3-201ENST00000447704 118 ntBASIC-0.38□□□□□ -2.47
COL5A3P25940 RNU6-479P-201ENST00000516348 105 ntBASIC-0.38□□□□□ -2.47
COL5A3P25940 MIR3675-201ENST00000583661 73 ntBASIC-0.38□□□□□ -2.47
COL5A3P25940 MIR5704-201ENST00000584029 77 ntBASIC-0.38□□□□□ -2.47
COL5A3P25940 RNU6-766P-201ENST00000362478 107 ntBASIC-0.39□□□□□ -2.47
COL5A3P25940 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.39□□□□□ -2.47
COL5A3P25940 RNY4P18-201ENST00000391107 89 ntBASIC-0.39□□□□□ -2.47
COL5A3P25940 AL450471.1-201ENST00000447509 127 ntBASIC-0.39□□□□□ -2.47
COL5A3P25940 AL031737.1-201ENST00000450125 223 ntBASIC-0.39□□□□□ -2.47
COL5A3P25940 SNORA13-201ENST00000458790 133 ntBASIC-0.39□□□□□ -2.47
COL5A3P25940 AC021146.6-201ENST00000514659 117 ntBASIC-0.39□□□□□ -2.47
COL5A3P25940 RNU6-633P-201ENST00000362612 103 ntBASIC-0.4□□□□□ -2.47
COL5A3P25940 SNORA63.6-201ENST00000364921 119 ntBASIC-0.4□□□□□ -2.47
COL5A3P25940 Y_RNA.348-201ENST00000365403 103 ntBASIC-0.4□□□□□ -2.47
COL5A3P25940 MIR519A2-201ENST00000384990 87 ntBASIC-0.4□□□□□ -2.47
COL5A3P25940 MIR124-2-201ENST00000385081 109 ntBASIC-0.4□□□□□ -2.47
COL5A3P25940 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.41□□□□□ -2.47
COL5A3P25940 RNU6-340P-201ENST00000364005 107 ntBASIC-0.41□□□□□ -2.47
COL5A3P25940 RNU6-313P-201ENST00000516317 112 ntBASIC-0.41□□□□□ -2.47
COL5A3P25940 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.41□□□□□ -2.48
COL5A3P25940 SNORA33.1-201ENST00000364957 130 ntBASIC-0.41□□□□□ -2.48
COL5A3P25940 SNORA62.4-201ENST00000365504 151 ntBASIC-0.41□□□□□ -2.48
COL5A3P25940 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.41□□□□□ -2.48
COL5A3P25940 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.41□□□□□ -2.48
COL5A3P25940 AC021146.9-201ENST00000512503 156 ntBASIC-0.41□□□□□ -2.48
COL5A3P25940 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.41□□□□□ -2.48
COL5A3P25940 RNU6-267P-201ENST00000516714 103 ntBASIC-0.41□□□□□ -2.48
COL5A3P25940 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.42□□□□□ -2.48
COL5A3P25940 SNORD115-23-201ENST00000364461 82 ntBASIC-0.42□□□□□ -2.48
COL5A3P25940 RNA5SP461-201ENST00000516451 104 ntBASIC-0.42□□□□□ -2.48
COL5A3P25940 RNU6-881P-201ENST00000516813 102 ntBASIC-0.42□□□□□ -2.48
COL5A3P25940 SNORA2.1-201ENST00000363089 137 ntBASIC-0.43□□□□□ -2.48
COL5A3P25940 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.43□□□□□ -2.48
COL5A3P25940 RNU6-44P-201ENST00000384045 107 ntBASIC-0.43□□□□□ -2.48
COL5A3P25940 SNORD77.2-201ENST00000391045 68 ntBASIC-0.43□□□□□ -2.48
COL5A3P25940 MIR4668-201ENST00000582284 70 ntBASIC-0.43□□□□□ -2.48
COL5A3P25940 AL353803.5-201ENST00000599815 141 ntBASIC-0.43□□□□□ -2.48
COL5A3P25940 AC006160.2-201ENST00000637708 154 ntBASIC-0.43□□□□□ -2.48
COL5A3P25940 RNU6-924P-201ENST00000362926 108 ntBASIC-0.44□□□□□ -2.48
COL5A3P25940 SNORD114-25-201ENST00000363742 72 ntBASIC-0.44□□□□□ -2.48
COL5A3P25940 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.44□□□□□ -2.48
COL5A3P25940 MIR517B-201ENST00000385102 67 ntBASIC-0.44□□□□□ -2.48
COL5A3P25940 MIR196A1-201ENST00000388006 70 ntBASIC-0.44□□□□□ -2.48
COL5A3P25940 AC022137.1-201ENST00000483735 151 ntBASIC-0.44□□□□□ -2.48
COL5A3P25940 AC093729.1-201ENST00000513074 128 ntBASIC-0.44□□□□□ -2.48
COL5A3P25940 RNU6-919P-201ENST00000516731 104 ntBASIC-0.44□□□□□ -2.48
COL5A3P25940 AC140658.3-201ENST00000567603 271 ntBASIC-0.44□□□□□ -2.48
COL5A3P25940 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.44□□□□□ -2.48
COL5A3P25940 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.44□□□□□ -2.48
COL5A3P25940 AL035461.1-201ENST00000421490 332 ntBASIC-0.44□□□□□ -2.48
COL5A3P25940 RNA5SP470-201ENST00000516463 106 ntBASIC-0.44□□□□□ -2.48
COL5A3P25940 RNU6-656P-201ENST00000516785 107 ntBASIC-0.44□□□□□ -2.48
COL5A3P25940 RNU6-158P-201ENST00000517104 100 ntBASIC-0.44□□□□□ -2.48
COL5A3P25940 AL445584.3-201ENST00000617173 78 ntBASIC-0.44□□□□□ -2.48
COL5A3P25940 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.45□□□□□ -2.48
COL5A3P25940 U6.81-201ENST00000612550 106 ntBASIC-0.45□□□□□ -2.48
COL5A3P25940 MIR6888-201ENST00000621977 67 ntBASIC-0.45□□□□□ -2.48
COL5A3P25940 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.46□□□□□ -2.48
COL5A3P25940 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.46□□□□□ -2.48
COL5A3P25940 RNY4P30-201ENST00000410216 95 ntBASIC-0.46□□□□□ -2.48
COL5A3P25940 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.46□□□□□ -2.48
COL5A3P25940 RNU6-755P-201ENST00000364400 103 ntBASIC-0.47□□□□□ -2.48
COL5A3P25940 SNORD113-1-201ENST00000365321 69 ntBASIC-0.47□□□□□ -2.48
COL5A3P25940 Y_RNA.607-201ENST00000410597 98 ntBASIC-0.47□□□□□ -2.48
COL5A3P25940 RNU6-789P-201ENST00000517105 102 ntBASIC-0.47□□□□□ -2.48
COL5A3P25940 MIR3165-201ENST00000579874 75 ntBASIC-0.47□□□□□ -2.48
COL5A3P25940 MIR548AI-201ENST00000579940 88 ntBASIC-0.47□□□□□ -2.48
COL5A3P25940 MIR6738-201ENST00000619620 64 ntBASIC-0.47□□□□□ -2.48
COL5A3P25940 SNORA63.4-201ENST00000362763 126 ntBASIC-0.47□□□□□ -2.49
COL5A3P25940 RNY1P1-201ENST00000364372 112 ntBASIC-0.47□□□□□ -2.49
COL5A3P25940 SNORD114-17-201ENST00000364699 75 ntBASIC-0.47□□□□□ -2.49
COL5A3P25940 RNU6-147P-201ENST00000383983 107 ntBASIC-0.47□□□□□ -2.49
COL5A3P25940 RNY1P7-201ENST00000384743 110 ntBASIC-0.47□□□□□ -2.49
COL5A3P25940 AL603908.1-201ENST00000406098 201 ntBASIC-0.47□□□□□ -2.49
COL5A3P25940 MALAT1.1-201ENST00000618249 95 ntBASIC-0.47□□□□□ -2.49
COL5A3P25940 MIR1297-201ENST00000637311 77 ntBASIC-0.47□□□□□ -2.49
COL5A3P25940 SNORD115-22-201ENST00000364456 82 ntBASIC-0.48□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 342.3 ms