Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.06□□□□□ -2.58
BDNFP23560 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.06□□□□□ -2.58
BDNFP23560 RNU7-154P-201ENST00000516194 62 ntBASIC-1.06□□□□□ -2.58
BDNFP23560 RNU6-162P-201ENST00000516228 103 ntBASIC-1.06□□□□□ -2.58
BDNFP23560 RNU6-109P-201ENST00000516364 107 ntBASIC-1.06□□□□□ -2.58
BDNFP23560 RNU7-153P-201ENST00000516455 62 ntBASIC-1.06□□□□□ -2.58
BDNFP23560 RNU6-184P-201ENST00000516514 107 ntBASIC-1.06□□□□□ -2.58
BDNFP23560 AC140658.3-201ENST00000567603 271 ntBASIC-1.06□□□□□ -2.58
BDNFP23560 MIR4324-201ENST00000584846 72 ntBASIC-1.06□□□□□ -2.58
BDNFP23560 MIR4320-201ENST00000636981 65 ntBASIC-1.06□□□□□ -2.58
BDNFP23560 snoU83B.1-201ENST00000517136 88 ntBASIC-1.07□□□□□ -2.58
BDNFP23560 uc_338.19-201ENST00000616808 99 ntBASIC-1.07□□□□□ -2.58
BDNFP23560 RNU6-340P-201ENST00000364005 107 ntBASIC-1.08□□□□□ -2.58
BDNFP23560 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.08□□□□□ -2.58
BDNFP23560 MIR4499-201ENST00000584834 69 ntBASIC-1.08□□□□□ -2.58
BDNFP23560 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.08□□□□□ -2.58
BDNFP23560 RNU6-774P-201ENST00000363238 107 ntBASIC-1.09□□□□□ -2.58
BDNFP23560 MIR519C-201ENST00000385053 87 ntBASIC-1.09□□□□□ -2.58
BDNFP23560 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.09□□□□□ -2.58
BDNFP23560 SCARNA18B-201ENST00000458806 135 ntBASIC-1.09□□□□□ -2.58
BDNFP23560 RNU6-81P-201ENST00000365608 104 ntBASIC-1.1□□□□□ -2.59
BDNFP23560 MIR519A2-201ENST00000384990 87 ntBASIC-1.1□□□□□ -2.59
BDNFP23560 SNORD77.2-201ENST00000391045 68 ntBASIC-1.1□□□□□ -2.59
BDNFP23560 RNU6-158P-201ENST00000517104 100 ntBASIC-1.1□□□□□ -2.59
BDNFP23560 RNU6-834P-201ENST00000362367 110 ntBASIC-1.11□□□□□ -2.59
BDNFP23560 RNU6-766P-201ENST00000362478 107 ntBASIC-1.11□□□□□ -2.59
BDNFP23560 SNORD115-27-201ENST00000364430 82 ntBASIC-1.11□□□□□ -2.59
BDNFP23560 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.11□□□□□ -2.59
BDNFP23560 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.11□□□□□ -2.59
BDNFP23560 SNORA19-201ENST00000384737 128 ntBASIC-1.11□□□□□ -2.59
BDNFP23560 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.11□□□□□ -2.59
BDNFP23560 MTATP8P2-201ENST00000435212 202 ntBASIC-1.11□□□□□ -2.59
BDNFP23560 MIR6129-201ENST00000616087 109 ntBASIC-1.11□□□□□ -2.59
BDNFP23560 SNORD115-33-201ENST00000363723 82 ntBASIC-1.12□□□□□ -2.59
BDNFP23560 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.12□□□□□ -2.59
BDNFP23560 MIR601-201ENST00000385256 79 ntBASIC-1.12□□□□□ -2.59
BDNFP23560 SNORA26.4-201ENST00000391188 123 ntBASIC-1.12□□□□□ -2.59
BDNFP23560 AL021921.1-201ENST00000442774 93 ntBASIC-1.12□□□□□ -2.59
BDNFP23560 RNU6-518P-201ENST00000516056 96 ntBASIC-1.12□□□□□ -2.59
BDNFP23560 RNU6-589P-201ENST00000516485 107 ntBASIC-1.12□□□□□ -2.59
BDNFP23560 MIR3671-201ENST00000580455 88 ntBASIC-1.12□□□□□ -2.59
BDNFP23560 AL365222.1-201ENST00000614661 98 ntBASIC-1.12□□□□□ -2.59
BDNFP23560 MIR198-201ENST00000637333 62 ntBASIC-1.12□□□□□ -2.59
BDNFP23560 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.12□□□□□ -2.59
BDNFP23560 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.13□□□□□ -2.59
BDNFP23560 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.13□□□□□ -2.59
BDNFP23560 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.13□□□□□ -2.59
BDNFP23560 MIR3668-201ENST00000582138 75 ntBASIC-1.13□□□□□ -2.59
BDNFP23560 MIR2052-201ENST00000636055 55 ntBASIC-1.13□□□□□ -2.59
BDNFP23560 SNORD115-37-201ENST00000363768 82 ntBASIC-1.14□□□□□ -2.59
BDNFP23560 AL035461.1-201ENST00000421490 332 ntBASIC-1.14□□□□□ -2.59
BDNFP23560 RNU6-633P-201ENST00000362612 103 ntBASIC-1.15□□□□□ -2.59
BDNFP23560 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.16□□□□□ -2.6
BDNFP23560 SNORD63.1-201ENST00000516178 80 ntBASIC-1.16□□□□□ -2.6
BDNFP23560 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.17□□□□□ -2.6
BDNFP23560 RNU6-656P-201ENST00000516785 107 ntBASIC-1.17□□□□□ -2.6
BDNFP23560 MIR4723-201ENST00000585070 81 ntBASIC-1.17□□□□□ -2.6
BDNFP23560 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.17□□□□□ -2.6
BDNFP23560 RNU6-624P-201ENST00000363411 107 ntBASIC-1.18□□□□□ -2.6
BDNFP23560 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.18□□□□□ -2.6
BDNFP23560 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.18□□□□□ -2.6
BDNFP23560 MIR378F-201ENST00000578143 78 ntBASIC-1.18□□□□□ -2.6
BDNFP23560 MIR4668-201ENST00000582284 70 ntBASIC-1.18□□□□□ -2.6
BDNFP23560 MIR29B1-201ENST00000385015 81 ntBASIC-1.19□□□□□ -2.6
BDNFP23560 AC093729.1-201ENST00000513074 128 ntBASIC-1.19□□□□□ -2.6
BDNFP23560 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.19□□□□□ -2.6
BDNFP23560 RNU6-22P-201ENST00000384355 107 ntBASIC-1.2□□□□□ -2.6
BDNFP23560 AL031737.1-201ENST00000450125 223 ntBASIC-1.2□□□□□ -2.6
BDNFP23560 RNU6-807P-201ENST00000516805 107 ntBASIC-1.2□□□□□ -2.6
BDNFP23560 MIR3165-201ENST00000579874 75 ntBASIC-1.2□□□□□ -2.6
BDNFP23560 RNA5SP192-201ENST00000364404 120 ntBASIC-1.21□□□□□ -2.6
BDNFP23560 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.21□□□□□ -2.6
BDNFP23560 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.21□□□□□ -2.6
BDNFP23560 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.21□□□□□ -2.6
BDNFP23560 AL353691.2-201ENST00000443795 59 ntBASIC-1.21□□□□□ -2.6
BDNFP23560 U2.7-201ENST00000619197 100 ntBASIC-1.21□□□□□ -2.6
BDNFP23560 SNORD115-22-201ENST00000364456 82 ntBASIC-1.22□□□□□ -2.6
BDNFP23560 RNU6-24P-201ENST00000384440 107 ntBASIC-1.22□□□□□ -2.6
BDNFP23560 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.22□□□□□ -2.6
BDNFP23560 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.22□□□□□ -2.6
BDNFP23560 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.22□□□□□ -2.6
BDNFP23560 RNU6-645P-201ENST00000364649 106 ntBASIC-1.23□□□□□ -2.61
BDNFP23560 SNORD116-22-201ENST00000384430 92 ntBASIC-1.23□□□□□ -2.61
BDNFP23560 RNU6-557P-201ENST00000516842 110 ntBASIC-1.23□□□□□ -2.61
BDNFP23560 RNU6-732P-201ENST00000516033 103 ntBASIC-1.24□□□□□ -2.61
BDNFP23560 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.24□□□□□ -2.61
BDNFP23560 MIR6818-201ENST00000621576 65 ntBASIC-1.24□□□□□ -2.61
BDNFP23560 AC132825.6-201ENST00000638861 357 ntBASIC-1.24□□□□□ -2.61
BDNFP23560 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.25□□□□□ -2.61
BDNFP23560 MIR548M-201ENST00000408260 86 ntBASIC-1.25□□□□□ -2.61
BDNFP23560 RNU6-479P-201ENST00000516348 105 ntBASIC-1.25□□□□□ -2.61
BDNFP23560 RNU6-303P-201ENST00000517091 106 ntBASIC-1.25□□□□□ -2.61
BDNFP23560 RNU6-246P-201ENST00000384702 107 ntBASIC-1.26□□□□□ -2.61
BDNFP23560 RNU4-61P-201ENST00000411243 107 ntBASIC-1.26□□□□□ -2.61
BDNFP23560 RNU6-313P-201ENST00000516317 112 ntBASIC-1.26□□□□□ -2.61
BDNFP23560 SNORA40.13-201ENST00000516379 120 ntBASIC-1.26□□□□□ -2.61
BDNFP23560 MIR548AG1-201ENST00000579932 66 ntBASIC-1.26□□□□□ -2.61
BDNFP23560 MIR3675-201ENST00000583661 73 ntBASIC-1.26□□□□□ -2.61
BDNFP23560 AP001318.4-201ENST00000616637 121 ntBASIC-1.26□□□□□ -2.61
BDNFP23560 MIR450A1-201ENST00000362262 91 ntBASIC-1.27□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 235.3 ms