Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 RNU6-746P-201ENST00000384112 109 ntBASIC-1.29□□□□□ -2.62
CD28P10747 RNU7-61P-201ENST00000515897 61 ntBASIC-1.29□□□□□ -2.62
CD28P10747 SNORD63.1-201ENST00000516178 80 ntBASIC-1.29□□□□□ -2.62
CD28P10747 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.3□□□□□ -2.62
CD28P10747 MIR590-201ENST00000385008 97 ntBASIC-1.3□□□□□ -2.62
CD28P10747 RNU6-907P-201ENST00000390924 102 ntBASIC-1.3□□□□□ -2.62
CD28P10747 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.3□□□□□ -2.62
CD28P10747 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.31□□□□□ -2.62
CD28P10747 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.31□□□□□ -2.62
CD28P10747 RNU6-340P-201ENST00000364005 107 ntBASIC-1.31□□□□□ -2.62
CD28P10747 MIR1302-5-201ENST00000408164 150 ntBASIC-1.31□□□□□ -2.62
CD28P10747 AL021921.1-201ENST00000442774 93 ntBASIC-1.31□□□□□ -2.62
CD28P10747 AL450471.1-201ENST00000447509 127 ntBASIC-1.31□□□□□ -2.62
CD28P10747 MIR4306-201ENST00000583390 91 ntBASIC-1.31□□□□□ -2.62
CD28P10747 RNU6-518P-201ENST00000516056 96 ntBASIC-1.32□□□□□ -2.62
CD28P10747 RNU6-479P-201ENST00000516348 105 ntBASIC-1.32□□□□□ -2.62
CD28P10747 RNU6-794P-201ENST00000517261 64 ntBASIC-1.32□□□□□ -2.62
CD28P10747 AC132825.6-201ENST00000638861 357 ntBASIC-1.32□□□□□ -2.62
CD28P10747 RNU6-681P-201ENST00000364012 104 ntBASIC-1.33□□□□□ -2.62
CD28P10747 RNU7-153P-201ENST00000516455 62 ntBASIC-1.33□□□□□ -2.62
CD28P10747 MIR6818-201ENST00000621576 65 ntBASIC-1.33□□□□□ -2.62
CD28P10747 SNORD115-22-201ENST00000364456 82 ntBASIC-1.34□□□□□ -2.62
CD28P10747 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.34□□□□□ -2.62
CD28P10747 MTATP8P2-201ENST00000435212 202 ntBASIC-1.34□□□□□ -2.62
CD28P10747 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.34□□□□□ -2.62
CD28P10747 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.34□□□□□ -2.62
CD28P10747 MIR3115-201ENST00000577915 68 ntBASIC-1.34□□□□□ -2.62
CD28P10747 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.34□□□□□ -2.62
CD28P10747 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.34□□□□□ -2.62
CD28P10747 U7.3-201ENST00000616123 62 ntBASIC-1.34□□□□□ -2.62
CD28P10747 RNU6-106P-201ENST00000384405 107 ntBASIC-1.35□□□□□ -2.63
CD28P10747 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.35□□□□□ -2.63
CD28P10747 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.36□□□□□ -2.63
CD28P10747 SNORD77.2-201ENST00000391045 68 ntBASIC-1.36□□□□□ -2.63
CD28P10747 RNU6-554P-201ENST00000410466 106 ntBASIC-1.36□□□□□ -2.63
CD28P10747 AL035461.1-201ENST00000421490 332 ntBASIC-1.36□□□□□ -2.63
CD28P10747 AL353691.2-201ENST00000443795 59 ntBASIC-1.36□□□□□ -2.63
CD28P10747 RNU6-656P-201ENST00000516785 107 ntBASIC-1.36□□□□□ -2.63
CD28P10747 RNU6-158P-201ENST00000517104 100 ntBASIC-1.36□□□□□ -2.63
CD28P10747 U4.2-201ENST00000618561 85 ntBASIC-1.36□□□□□ -2.63
CD28P10747 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.37□□□□□ -2.63
CD28P10747 SNORD115-27-201ENST00000364430 82 ntBASIC-1.37□□□□□ -2.63
CD28P10747 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.37□□□□□ -2.63
CD28P10747 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.38□□□□□ -2.63
CD28P10747 MIR519C-201ENST00000385053 87 ntBASIC-1.38□□□□□ -2.63
CD28P10747 RNU6-732P-201ENST00000516033 103 ntBASIC-1.38□□□□□ -2.63
CD28P10747 RNU6-704P-201ENST00000364162 103 ntBASIC-1.39□□□□□ -2.63
CD28P10747 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.39□□□□□ -2.63
CD28P10747 RNU6-162P-201ENST00000516228 103 ntBASIC-1.39□□□□□ -2.63
CD28P10747 RNU6-109P-201ENST00000516364 107 ntBASIC-1.39□□□□□ -2.63
CD28P10747 RNU6-184P-201ENST00000516514 107 ntBASIC-1.39□□□□□ -2.63
CD28P10747 RNU6-807P-201ENST00000516805 107 ntBASIC-1.39□□□□□ -2.63
CD28P10747 U2.7-201ENST00000619197 100 ntBASIC-1.39□□□□□ -2.63
CD28P10747 RNA5SP26-201ENST00000362406 119 ntBASIC-1.4□□□□□ -2.63
CD28P10747 RNU6-246P-201ENST00000384702 107 ntBASIC-1.4□□□□□ -2.63
CD28P10747 Y_RNA.703-201ENST00000516846 111 ntBASIC-1.4□□□□□ -2.63
CD28P10747 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.4□□□□□ -2.63
CD28P10747 MIR548AG1-201ENST00000579932 66 ntBASIC-1.4□□□□□ -2.63
CD28P10747 RNU7-134P-201ENST00000458997 64 ntBASIC-1.41□□□□□ -2.64
CD28P10747 RNU6-766P-201ENST00000362478 107 ntBASIC-1.42□□□□□ -2.64
CD28P10747 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.42□□□□□ -2.64
CD28P10747 RNU6-633P-201ENST00000362612 103 ntBASIC-1.42□□□□□ -2.64
CD28P10747 RNU6-774P-201ENST00000363238 107 ntBASIC-1.42□□□□□ -2.64
CD28P10747 RNU6-624P-201ENST00000363411 107 ntBASIC-1.42□□□□□ -2.64
CD28P10747 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.42□□□□□ -2.64
CD28P10747 RNU6-576P-201ENST00000390854 102 ntBASIC-1.42□□□□□ -2.64
CD28P10747 AC090425.1-201ENST00000610007 140 ntBASIC-1.42□□□□□ -2.64
CD28P10747 RNU6-959P-201ENST00000384671 107 ntBASIC-1.43□□□□□ -2.64
CD28P10747 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.43□□□□□ -2.64
CD28P10747 RNU4-61P-201ENST00000411243 107 ntBASIC-1.43□□□□□ -2.64
CD28P10747 AC008267.6-201ENST00000441664 139 ntBASIC-1.43□□□□□ -2.64
CD28P10747 RNA5SP180-201ENST00000516181 101 ntBASIC-1.43□□□□□ -2.64
CD28P10747 AC138207.3-201ENST00000585289 166 ntBASIC-1.43□□□□□ -2.64
CD28P10747 MIR365A-201ENST00000362260 87 ntBASIC-1.44□□□□□ -2.64
CD28P10747 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.44□□□□□ -2.64
CD28P10747 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.44□□□□□ -2.64
CD28P10747 MIR527-201ENST00000385244 85 ntBASIC-1.44□□□□□ -2.64
CD28P10747 snosnR66.1-201ENST00000391095 99 ntBASIC-1.44□□□□□ -2.64
CD28P10747 SNORD114-3-201ENST00000364969 75 ntBASIC-1.45□□□□□ -2.64
CD28P10747 SNORA19-201ENST00000384737 128 ntBASIC-1.45□□□□□ -2.64
CD28P10747 SNORD19-201ENST00000391191 68 ntBASIC-1.45□□□□□ -2.64
CD28P10747 RNA5SP461-201ENST00000516451 104 ntBASIC-1.45□□□□□ -2.64
CD28P10747 RNU6-589P-201ENST00000516485 107 ntBASIC-1.45□□□□□ -2.64
CD28P10747 MIR3133-201ENST00000583157 78 ntBASIC-1.45□□□□□ -2.64
CD28P10747 RNU6-834P-201ENST00000362367 110 ntBASIC-1.46□□□□□ -2.64
CD28P10747 RNU6-645P-201ENST00000364649 106 ntBASIC-1.46□□□□□ -2.64
CD28P10747 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.46□□□□□ -2.64
CD28P10747 U7.5-201ENST00000517224 61 ntBASIC-1.46□□□□□ -2.64
CD28P10747 SNORD115-37-201ENST00000363768 82 ntBASIC-1.47□□□□□ -2.64
CD28P10747 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.47□□□□□ -2.64
CD28P10747 MIR1207-201ENST00000408249 87 ntBASIC-1.47□□□□□ -2.64
CD28P10747 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.47□□□□□ -2.64
CD28P10747 RNU6-557P-201ENST00000516842 110 ntBASIC-1.47□□□□□ -2.64
CD28P10747 AP002795.1-201ENST00000534879 84 ntBASIC-1.47□□□□□ -2.64
CD28P10747 MIR5683-201ENST00000636514 76 ntBASIC-1.47□□□□□ -2.64
CD28P10747 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.47□□□□□ -2.64
CD28P10747 RNU6-164P-201ENST00000364604 103 ntBASIC-1.48□□□□□ -2.65
CD28P10747 RNU6-497P-201ENST00000365316 104 ntBASIC-1.48□□□□□ -2.65
CD28P10747 RNU6-81P-201ENST00000365608 104 ntBASIC-1.48□□□□□ -2.65
CD28P10747 MIR1285-2-201ENST00000408311 88 ntBASIC-1.48□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 178.4 ms