Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 RNU6-639P-201ENST00000384074 107 ntBASIC-1.03□□□□□ -2.57
COL1A1P02452 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.03□□□□□ -2.57
COL1A1P02452 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.03□□□□□ -2.57
COL1A1P02452 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.03□□□□□ -2.57
COL1A1P02452 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.03□□□□□ -2.57
COL1A1P02452 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.03□□□□□ -2.57
COL1A1P02452 MIR466-201ENST00000580653 84 ntBASIC-1.03□□□□□ -2.57
COL1A1P02452 AC141273.2-201ENST00000618989 130 ntBASIC-1.03□□□□□ -2.57
COL1A1P02452 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-1.03□□□□□ -2.57
COL1A1P02452 MIR1302-1-201ENST00000637932 143 ntBASIC-1.03□□□□□ -2.57
COL1A1P02452 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.04□□□□□ -2.58
COL1A1P02452 Y_RNA.483-201ENST00000384380 101 ntBASIC-1.04□□□□□ -2.58
COL1A1P02452 RNU6-995P-201ENST00000391244 107 ntBASIC-1.04□□□□□ -2.58
COL1A1P02452 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.04□□□□□ -2.58
COL1A1P02452 AL450471.1-201ENST00000447509 127 ntBASIC-1.04□□□□□ -2.58
COL1A1P02452 AL118496.2-201ENST00000448300 230 ntBASIC-1.04□□□□□ -2.58
COL1A1P02452 SNORD19B-201ENST00000459623 84 ntBASIC-1.04□□□□□ -2.58
COL1A1P02452 AC097484.2-201ENST00000509147 251 ntBASIC-1.04□□□□□ -2.58
COL1A1P02452 RNU6-1219P-201ENST00000516143 112 ntBASIC-1.04□□□□□ -2.58
COL1A1P02452 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.04□□□□□ -2.58
COL1A1P02452 MIR4694-201ENST00000578534 80 ntBASIC-1.04□□□□□ -2.58
COL1A1P02452 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.04□□□□□ -2.58
COL1A1P02452 RNY3P2-201ENST00000362918 102 ntBASIC-1.05□□□□□ -2.58
COL1A1P02452 Y_RNA.75-201ENST00000362927 97 ntBASIC-1.05□□□□□ -2.58
COL1A1P02452 RNU6-912P-201ENST00000363800 104 ntBASIC-1.05□□□□□ -2.58
COL1A1P02452 RNU6-915P-201ENST00000364943 103 ntBASIC-1.05□□□□□ -2.58
COL1A1P02452 Y_RNA.337-201ENST00000365312 102 ntBASIC-1.05□□□□□ -2.58
COL1A1P02452 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.05□□□□□ -2.58
COL1A1P02452 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.05□□□□□ -2.58
COL1A1P02452 MIR548AA1-201ENST00000384971 97 ntBASIC-1.05□□□□□ -2.58
COL1A1P02452 AL589823.1-201ENST00000429577 183 ntBASIC-1.05□□□□□ -2.58
COL1A1P02452 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.05□□□□□ -2.58
COL1A1P02452 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.05□□□□□ -2.58
COL1A1P02452 RNU6-1153P-201ENST00000516760 105 ntBASIC-1.05□□□□□ -2.58
COL1A1P02452 RNU6-1137P-201ENST00000517073 99 ntBASIC-1.05□□□□□ -2.58
COL1A1P02452 MIR3144-201ENST00000579460 79 ntBASIC-1.05□□□□□ -2.58
COL1A1P02452 MIR23C-201ENST00000579846 100 ntBASIC-1.05□□□□□ -2.58
COL1A1P02452 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.05□□□□□ -2.58
COL1A1P02452 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.05□□□□□ -2.58
COL1A1P02452 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.05□□□□□ -2.58
COL1A1P02452 MIR7978-201ENST00000636158 59 ntBASIC-1.05□□□□□ -2.58
COL1A1P02452 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.05□□□□□ -2.58
COL1A1P02452 MIR202-201ENST00000362219 110 ntBASIC-1.05□□□□□ -2.58
COL1A1P02452 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.05□□□□□ -2.58
COL1A1P02452 SNORD58A-201ENST00000383875 65 ntBASIC-1.05□□□□□ -2.58
COL1A1P02452 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.05□□□□□ -2.58
COL1A1P02452 RNU6-604P-201ENST00000390917 100 ntBASIC-1.05□□□□□ -2.58
COL1A1P02452 RNU6-918P-201ENST00000391219 106 ntBASIC-1.05□□□□□ -2.58
COL1A1P02452 Y_RNA.626-201ENST00000411288 95 ntBASIC-1.05□□□□□ -2.58
COL1A1P02452 MTND2P23-201ENST00000422990 651 ntBASIC-1.05□□□□□ -2.58
COL1A1P02452 RNU7-197P-201ENST00000458836 62 ntBASIC-1.05□□□□□ -2.58
COL1A1P02452 RNU6-162P-201ENST00000516228 103 ntBASIC-1.05□□□□□ -2.58
COL1A1P02452 AC139792.2-201ENST00000624218 587 ntBASIC-1.05□□□□□ -2.58
COL1A1P02452 Y_RNA.307-201ENST00000365022 117 ntBASIC-1.06□□□□□ -2.58
COL1A1P02452 RNU4-11P-201ENST00000365287 132 ntBASIC-1.06□□□□□ -2.58
COL1A1P02452 RNU6-106P-201ENST00000384405 107 ntBASIC-1.06□□□□□ -2.58
COL1A1P02452 Y_RNA.505-201ENST00000384489 102 ntBASIC-1.06□□□□□ -2.58
COL1A1P02452 MIR3646-201ENST00000578301 84 ntBASIC-1.06□□□□□ -2.58
COL1A1P02452 AC113195.1-201ENST00000579952 141 ntBASIC-1.06□□□□□ -2.58
COL1A1P02452 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.06□□□□□ -2.58
COL1A1P02452 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.06□□□□□ -2.58
COL1A1P02452 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.06□□□□□ -2.58
COL1A1P02452 Y_RNA.63-201ENST00000362841 102 ntBASIC-1.07□□□□□ -2.58
COL1A1P02452 RNU6-698P-201ENST00000363523 107 ntBASIC-1.07□□□□□ -2.58
COL1A1P02452 Y_RNA.216-201ENST00000364205 93 ntBASIC-1.07□□□□□ -2.58
COL1A1P02452 SNORD45B-201ENST00000364617 72 ntBASIC-1.07□□□□□ -2.58
COL1A1P02452 RNU6-34P-201ENST00000364874 107 ntBASIC-1.07□□□□□ -2.58
COL1A1P02452 RNA5SP136-201ENST00000410906 107 ntBASIC-1.07□□□□□ -2.58
COL1A1P02452 MTND1P19-201ENST00000511780 315 ntBASIC-1.07□□□□□ -2.58
COL1A1P02452 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.07□□□□□ -2.58
COL1A1P02452 SNORD45.1-201ENST00000363181 77 ntBASIC-1.08□□□□□ -2.58
COL1A1P02452 RNY4P9-201ENST00000363194 97 ntBASIC-1.08□□□□□ -2.58
COL1A1P02452 SNORA27.2-201ENST00000363365 126 ntBASIC-1.08□□□□□ -2.58
COL1A1P02452 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.08□□□□□ -2.58
COL1A1P02452 Y_RNA.276-201ENST00000364732 109 ntBASIC-1.08□□□□□ -2.58
COL1A1P02452 RNU6-649P-201ENST00000384463 107 ntBASIC-1.08□□□□□ -2.58
COL1A1P02452 RNU6-172P-201ENST00000411000 93 ntBASIC-1.08□□□□□ -2.58
COL1A1P02452 RNU6-523P-201ENST00000516304 54 ntBASIC-1.08□□□□□ -2.58
COL1A1P02452 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.09□□□□□ -2.58
COL1A1P02452 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.09□□□□□ -2.58
COL1A1P02452 RNU6-474P-201ENST00000384243 107 ntBASIC-1.09□□□□□ -2.58
COL1A1P02452 Y_RNA.509-201ENST00000384506 99 ntBASIC-1.09□□□□□ -2.58
COL1A1P02452 SNORD116-16-201ENST00000384533 92 ntBASIC-1.09□□□□□ -2.58
COL1A1P02452 RNU6-530P-201ENST00000391180 107 ntBASIC-1.09□□□□□ -2.58
COL1A1P02452 MIR1254-1-201ENST00000408257 97 ntBASIC-1.09□□□□□ -2.58
COL1A1P02452 AL158147.1-201ENST00000443970 75 ntBASIC-1.09□□□□□ -2.58
COL1A1P02452 RNU6-752P-201ENST00000516376 102 ntBASIC-1.09□□□□□ -2.58
COL1A1P02452 RNU7-121P-201ENST00000516604 62 ntBASIC-1.09□□□□□ -2.58
COL1A1P02452 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.09□□□□□ -2.58
COL1A1P02452 Y_RNA.79-201ENST00000362992 113 ntBASIC-1.1□□□□□ -2.59
COL1A1P02452 RNU6-239P-201ENST00000390990 99 ntBASIC-1.1□□□□□ -2.59
COL1A1P02452 RNU7-61P-201ENST00000515897 61 ntBASIC-1.1□□□□□ -2.59
COL1A1P02452 AC130289.1-201ENST00000577321 73 ntBASIC-1.1□□□□□ -2.59
COL1A1P02452 MIR5693-201ENST00000577722 73 ntBASIC-1.1□□□□□ -2.59
COL1A1P02452 AP001318.4-201ENST00000616637 121 ntBASIC-1.1□□□□□ -2.59
COL1A1P02452 MIR664A-201ENST00000626086 82 ntBASIC-1.1□□□□□ -2.59
COL1A1P02452 SNORD18C-201ENST00000362704 69 ntBASIC-1.11□□□□□ -2.59
COL1A1P02452 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.11□□□□□ -2.59
COL1A1P02452 RNU6-574P-201ENST00000384265 107 ntBASIC-1.11□□□□□ -2.59
COL1A1P02452 SNORD116-4-201ENST00000384733 96 ntBASIC-1.11□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 176.9 ms