Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.83□□□□□ -2.7
UPK1BO75841 MIR548H1-201ENST00000408610 102 ntBASIC-1.83□□□□□ -2.7
UPK1BO75841 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.83□□□□□ -2.7
UPK1BO75841 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.83□□□□□ -2.7
UPK1BO75841 AL353621.2-201ENST00000605340 133 ntBASIC-1.83□□□□□ -2.7
UPK1BO75841 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.84□□□□□ -2.7
UPK1BO75841 RNU6-971P-201ENST00000516920 106 ntBASIC-1.84□□□□□ -2.7
UPK1BO75841 RNA5SP26-201ENST00000362406 119 ntBASIC-1.85□□□□□ -2.71
UPK1BO75841 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.85□□□□□ -2.71
UPK1BO75841 RNU7-88P-201ENST00000458752 63 ntBASIC-1.85□□□□□ -2.71
UPK1BO75841 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.86□□□□□ -2.71
UPK1BO75841 AL021921.1-201ENST00000442774 93 ntBASIC-1.86□□□□□ -2.71
UPK1BO75841 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.87□□□□□ -2.71
UPK1BO75841 RNU6-80P-201ENST00000384195 107 ntBASIC-1.87□□□□□ -2.71
UPK1BO75841 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.87□□□□□ -2.71
UPK1BO75841 MIR1236-201ENST00000408340 102 ntBASIC-1.87□□□□□ -2.71
UPK1BO75841 AL450471.1-201ENST00000447509 127 ntBASIC-1.87□□□□□ -2.71
UPK1BO75841 RNU6-732P-201ENST00000516033 103 ntBASIC-1.87□□□□□ -2.71
UPK1BO75841 RNU6-904P-201ENST00000516206 101 ntBASIC-1.87□□□□□ -2.71
UPK1BO75841 RNU6-182P-201ENST00000516970 105 ntBASIC-1.87□□□□□ -2.71
UPK1BO75841 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.87□□□□□ -2.71
UPK1BO75841 SNORD116-10-201ENST00000363791 102 ntBASIC-1.88□□□□□ -2.71
UPK1BO75841 RNU6-694P-201ENST00000364071 147 ntBASIC-1.88□□□□□ -2.71
UPK1BO75841 RNU6-704P-201ENST00000364162 103 ntBASIC-1.88□□□□□ -2.71
UPK1BO75841 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.88□□□□□ -2.71
UPK1BO75841 RNU6-886P-201ENST00000384319 105 ntBASIC-1.88□□□□□ -2.71
UPK1BO75841 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.88□□□□□ -2.71
UPK1BO75841 RNU6-752P-201ENST00000516376 102 ntBASIC-1.88□□□□□ -2.71
UPK1BO75841 RNU7-153P-201ENST00000516455 62 ntBASIC-1.88□□□□□ -2.71
UPK1BO75841 MIR548AG1-201ENST00000579932 66 ntBASIC-1.88□□□□□ -2.71
UPK1BO75841 RNA5SP331-201ENST00000364986 107 ntBASIC-1.89□□□□□ -2.71
UPK1BO75841 U7.5-201ENST00000517224 61 ntBASIC-1.89□□□□□ -2.71
UPK1BO75841 U6.95-201ENST00000636931 70 ntBASIC-1.89□□□□□ -2.71
UPK1BO75841 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.9□□□□□ -2.71
UPK1BO75841 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.9□□□□□ -2.71
UPK1BO75841 RNU7-200P-201ENST00000516105 62 ntBASIC-1.9□□□□□ -2.71
UPK1BO75841 AP002795.1-201ENST00000534879 84 ntBASIC-1.9□□□□□ -2.71
UPK1BO75841 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.91□□□□□ -2.72
UPK1BO75841 RNU6-164P-201ENST00000364604 103 ntBASIC-1.91□□□□□ -2.72
UPK1BO75841 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.91□□□□□ -2.72
UPK1BO75841 RNU7-61P-201ENST00000515897 61 ntBASIC-1.91□□□□□ -2.72
UPK1BO75841 RNU6-537P-201ENST00000517277 103 ntBASIC-1.91□□□□□ -2.72
UPK1BO75841 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.91□□□□□ -2.72
UPK1BO75841 RNU6-340P-201ENST00000364005 107 ntBASIC-1.92□□□□□ -2.72
UPK1BO75841 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.92□□□□□ -2.72
UPK1BO75841 MIR487B-201ENST00000385021 84 ntBASIC-1.92□□□□□ -2.72
UPK1BO75841 SNORD19-201ENST00000391191 68 ntBASIC-1.92□□□□□ -2.72
UPK1BO75841 MIR4490-201ENST00000582647 84 ntBASIC-1.92□□□□□ -2.72
UPK1BO75841 MIR5683-201ENST00000636514 76 ntBASIC-1.92□□□□□ -2.72
UPK1BO75841 RNU6-228P-201ENST00000362700 106 ntBASIC-1.93□□□□□ -2.72
UPK1BO75841 RNU6-246P-201ENST00000384702 107 ntBASIC-1.93□□□□□ -2.72
UPK1BO75841 MT-TG-201ENST00000387429 68 ntBASIC-1.93□□□□□ -2.72
UPK1BO75841 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.93□□□□□ -2.72
UPK1BO75841 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.94□□□□□ -2.72
UPK1BO75841 AL078595.1-201ENST00000404458 226 ntBASIC-1.94□□□□□ -2.72
UPK1BO75841 RPL35AP4-201ENST00000412007 102 ntBASIC-1.94□□□□□ -2.72
UPK1BO75841 RNU6-162P-201ENST00000516228 103 ntBASIC-1.94□□□□□ -2.72
UPK1BO75841 RNU6-346P-201ENST00000516288 111 ntBASIC-1.94□□□□□ -2.72
UPK1BO75841 RNU6-659P-201ENST00000516454 104 ntBASIC-1.94□□□□□ -2.72
UPK1BO75841 RNU6-656P-201ENST00000516785 107 ntBASIC-1.94□□□□□ -2.72
UPK1BO75841 RNU6-880P-201ENST00000384526 107 ntBASIC-1.95□□□□□ -2.72
UPK1BO75841 AL035461.1-201ENST00000421490 332 ntBASIC-1.95□□□□□ -2.72
UPK1BO75841 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.95□□□□□ -2.72
UPK1BO75841 RNU6-681P-201ENST00000364012 104 ntBASIC-1.96□□□□□ -2.72
UPK1BO75841 U2.7-201ENST00000619197 100 ntBASIC-1.96□□□□□ -2.72
UPK1BO75841 MIR590-201ENST00000385008 97 ntBASIC-1.97□□□□□ -2.72
UPK1BO75841 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.97□□□□□ -2.72
UPK1BO75841 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.98□□□□□ -2.73
UPK1BO75841 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.98□□□□□ -2.73
UPK1BO75841 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.98□□□□□ -2.73
UPK1BO75841 SNORD116-21-201ENST00000384507 92 ntBASIC-1.98□□□□□ -2.73
UPK1BO75841 SNORD115-27-201ENST00000364430 82 ntBASIC-1.99□□□□□ -2.73
UPK1BO75841 MIR548C-201ENST00000384815 97 ntBASIC-1.99□□□□□ -2.73
UPK1BO75841 MIR548Q-201ENST00000408404 100 ntBASIC-1.99□□□□□ -2.73
UPK1BO75841 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.99□□□□□ -2.73
UPK1BO75841 U7.3-201ENST00000616123 62 ntBASIC-1.99□□□□□ -2.73
UPK1BO75841 AL627230.5-201ENST00000619807 58 ntBASIC-1.99□□□□□ -2.73
UPK1BO75841 RNU6-774P-201ENST00000363238 107 ntBASIC-2□□□□□ -2.73
UPK1BO75841 SNORD77.2-201ENST00000391045 68 ntBASIC-2□□□□□ -2.73
UPK1BO75841 AC108019.1-201ENST00000512540 175 ntBASIC-2□□□□□ -2.73
UPK1BO75841 Y_RNA.71-201ENST00000362892 104 ntBASIC-2.01□□□□□ -2.73
UPK1BO75841 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.01□□□□□ -2.73
UPK1BO75841 RNU6-807P-201ENST00000516805 107 ntBASIC-2.01□□□□□ -2.73
UPK1BO75841 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-2.01□□□□□ -2.73
UPK1BO75841 Y_RNA.107-201ENST00000363190 121 ntBASIC-2.02□□□□□ -2.73
UPK1BO75841 Y_RNA.375-201ENST00000365625 101 ntBASIC-2.02□□□□□ -2.73
UPK1BO75841 Y_RNA.413-201ENST00000384007 102 ntBASIC-2.02□□□□□ -2.73
UPK1BO75841 Y_RNA.502-201ENST00000384478 113 ntBASIC-2.02□□□□□ -2.73
UPK1BO75841 AC090616.4-201ENST00000448026 115 ntBASIC-2.02□□□□□ -2.73
UPK1BO75841 Y_RNA.754-201ENST00000476024 102 ntBASIC-2.02□□□□□ -2.73
UPK1BO75841 MIR4756-201ENST00000577874 78 ntBASIC-2.02□□□□□ -2.73
UPK1BO75841 Y_RNA.790-201ENST00000614282 102 ntBASIC-2.02□□□□□ -2.73
UPK1BO75841 Y_RNA.782-201ENST00000614695 102 ntBASIC-2.02□□□□□ -2.73
UPK1BO75841 RNU6-645P-201ENST00000364649 106 ntBASIC-2.03□□□□□ -2.73
UPK1BO75841 MIR1302-5-201ENST00000408164 150 ntBASIC-2.03□□□□□ -2.73
UPK1BO75841 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.03□□□□□ -2.73
UPK1BO75841 RNU6-1108P-201ENST00000516308 104 ntBASIC-2.03□□□□□ -2.73
UPK1BO75841 RNU6-109P-201ENST00000516364 107 ntBASIC-2.03□□□□□ -2.73
UPK1BO75841 RNU6-184P-201ENST00000516514 107 ntBASIC-2.03□□□□□ -2.73
UPK1BO75841 U4.2-201ENST00000618561 85 ntBASIC-2.03□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 218 ms