Protein–RNA interactions for Protein: O43542

XRCC3, DNA repair protein XRCC3, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3O43542 RNU6-752P-201ENST00000516376 102 ntBASIC-0.69□□□□□ -2.52
XRCC3O43542 snoR1.1-201ENST00000628177 80 ntBASIC-0.69□□□□□ -2.52
XRCC3O43542 U6.96-201ENST00000636425 70 ntBASIC-0.69□□□□□ -2.52
XRCC3O43542 Y_RNA.291-201ENST00000364886 113 ntBASIC-0.7□□□□□ -2.52
XRCC3O43542 MIR204-201ENST00000385200 110 ntBASIC-0.7□□□□□ -2.52
XRCC3O43542 SNORD77.2-201ENST00000391045 68 ntBASIC-0.7□□□□□ -2.52
XRCC3O43542 AC093729.1-201ENST00000513074 128 ntBASIC-0.7□□□□□ -2.52
XRCC3O43542 SNORD38.3-201ENST00000516599 73 ntBASIC-0.7□□□□□ -2.52
XRCC3O43542 RNA5SP169-201ENST00000517268 117 ntBASIC-0.7□□□□□ -2.52
XRCC3O43542 RNU6-640P-201ENST00000363693 105 ntBASIC-0.71□□□□□ -2.52
XRCC3O43542 RNU6-681P-201ENST00000364012 104 ntBASIC-0.71□□□□□ -2.52
XRCC3O43542 SNORD115-23-201ENST00000364461 82 ntBASIC-0.71□□□□□ -2.52
XRCC3O43542 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.71□□□□□ -2.52
XRCC3O43542 RNU6-219P-201ENST00000364728 107 ntBASIC-0.71□□□□□ -2.52
XRCC3O43542 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.71□□□□□ -2.52
XRCC3O43542 SNORA13-201ENST00000458790 133 ntBASIC-0.71□□□□□ -2.52
XRCC3O43542 YWHAEP3-201ENST00000582767 121 ntBASIC-0.71□□□□□ -2.52
XRCC3O43542 MIR4320-201ENST00000636981 65 ntBASIC-0.71□□□□□ -2.52
XRCC3O43542 SNORD114-14-201ENST00000362723 75 ntBASIC-0.72□□□□□ -2.52
XRCC3O43542 RNU6-340P-201ENST00000364005 107 ntBASIC-0.72□□□□□ -2.52
XRCC3O43542 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.72□□□□□ -2.52
XRCC3O43542 RNU6-905P-201ENST00000384434 107 ntBASIC-0.72□□□□□ -2.52
XRCC3O43542 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.72□□□□□ -2.52
XRCC3O43542 RNA5SP147-201ENST00000516493 109 ntBASIC-0.72□□□□□ -2.52
XRCC3O43542 RNU6-624P-201ENST00000363411 107 ntBASIC-0.73□□□□□ -2.53
XRCC3O43542 RNU6-497P-201ENST00000365316 104 ntBASIC-0.73□□□□□ -2.53
XRCC3O43542 MIR5704-201ENST00000584029 77 ntBASIC-0.73□□□□□ -2.53
XRCC3O43542 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.73□□□□□ -2.53
XRCC3O43542 MIR6854-201ENST00000614935 69 ntBASIC-0.73□□□□□ -2.53
XRCC3O43542 U2.22-201ENST00000636441 106 ntBASIC-0.73□□□□□ -2.53
XRCC3O43542 MIR488-201ENST00000365739 83 ntBASIC-0.74□□□□□ -2.53
XRCC3O43542 RNU6-44P-201ENST00000384045 107 ntBASIC-0.74□□□□□ -2.53
XRCC3O43542 RNU6-402P-201ENST00000410678 103 ntBASIC-0.75□□□□□ -2.53
XRCC3O43542 SCARNA17-201ENST00000516183 144 ntBASIC-0.75□□□□□ -2.53
XRCC3O43542 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.76□□□□□ -2.53
XRCC3O43542 MIR518B-201ENST00000385127 83 ntBASIC-0.76□□□□□ -2.53
XRCC3O43542 AC140658.3-201ENST00000567603 271 ntBASIC-0.76□□□□□ -2.53
XRCC3O43542 MIR4436A-201ENST00000585278 85 ntBASIC-0.76□□□□□ -2.53
XRCC3O43542 AC090617.8-201ENST00000623339 167 ntBASIC-0.76□□□□□ -2.53
XRCC3O43542 SNORA33.1-201ENST00000364957 130 ntBASIC-0.77□□□□□ -2.53
XRCC3O43542 RNY1P7-201ENST00000384743 110 ntBASIC-0.77□□□□□ -2.53
XRCC3O43542 AC021146.6-201ENST00000514659 117 ntBASIC-0.77□□□□□ -2.53
XRCC3O43542 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.77□□□□□ -2.53
XRCC3O43542 RNU6-267P-201ENST00000516714 103 ntBASIC-0.77□□□□□ -2.53
XRCC3O43542 MIR521-2-201ENST00000384818 87 ntBASIC-0.78□□□□□ -2.53
XRCC3O43542 SNORA3B-201ENST00000391305 131 ntBASIC-0.78□□□□□ -2.53
XRCC3O43542 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.78□□□□□ -2.53
XRCC3O43542 MIR6739-201ENST00000622461 75 ntBASIC-0.78□□□□□ -2.53
XRCC3O43542 MIR548BB-201ENST00000626714 66 ntBASIC-0.78□□□□□ -2.53
XRCC3O43542 SNORD74.6-201ENST00000364796 70 ntBASIC-0.79□□□□□ -2.54
XRCC3O43542 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.79□□□□□ -2.54
XRCC3O43542 RNU6-557P-201ENST00000516842 110 ntBASIC-0.79□□□□□ -2.54
XRCC3O43542 MIR8068-201ENST00000618032 68 ntBASIC-0.79□□□□□ -2.54
XRCC3O43542 MIR6738-201ENST00000619620 64 ntBASIC-0.79□□□□□ -2.54
XRCC3O43542 MIR198-201ENST00000637333 62 ntBASIC-0.79□□□□□ -2.54
XRCC3O43542 SNORA62.4-201ENST00000365504 151 ntBASIC-0.8□□□□□ -2.54
XRCC3O43542 RNU6-10P-201ENST00000384036 107 ntBASIC-0.8□□□□□ -2.54
XRCC3O43542 RNU6-675P-201ENST00000384236 104 ntBASIC-0.81□□□□□ -2.54
XRCC3O43542 MIR601-201ENST00000385256 79 ntBASIC-0.81□□□□□ -2.54
XRCC3O43542 RNU6-168P-201ENST00000516189 101 ntBASIC-0.81□□□□□ -2.54
XRCC3O43542 RNA5SP470-201ENST00000516463 106 ntBASIC-0.81□□□□□ -2.54
XRCC3O43542 RNU6-844P-201ENST00000517175 102 ntBASIC-0.81□□□□□ -2.54
XRCC3O43542 CYP3A54P-201ENST00000566950 75 ntBASIC-0.81□□□□□ -2.54
XRCC3O43542 MIR3179-1-201ENST00000578940 84 ntBASIC-0.82□□□□□ -2.54
XRCC3O43542 MIR3179-2-201ENST00000579107 84 ntBASIC-0.82□□□□□ -2.54
XRCC3O43542 MIR3179-3-201ENST00000579566 84 ntBASIC-0.82□□□□□ -2.54
XRCC3O43542 MIR3179-4-201ENST00000617599 84 ntBASIC-0.82□□□□□ -2.54
XRCC3O43542 SNORD22.1-201ENST00000516331 125 ntBASIC-0.83□□□□□ -2.54
XRCC3O43542 MIR4324-201ENST00000584846 72 ntBASIC-0.83□□□□□ -2.54
XRCC3O43542 MIR4723-201ENST00000585070 81 ntBASIC-0.83□□□□□ -2.54
XRCC3O43542 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.84□□□□□ -2.54
XRCC3O43542 MIR1255B2-201ENST00000408618 67 ntBASIC-0.84□□□□□ -2.54
XRCC3O43542 AL353803.5-201ENST00000599815 141 ntBASIC-0.84□□□□□ -2.54
XRCC3O43542 RNA5SP89-201ENST00000410300 108 ntBASIC-0.85□□□□□ -2.55
XRCC3O43542 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.85□□□□□ -2.55
XRCC3O43542 U4.2-201ENST00000618561 85 ntBASIC-0.85□□□□□ -2.55
XRCC3O43542 RNU6-721P-201ENST00000410155 105 ntBASIC-0.86□□□□□ -2.55
XRCC3O43542 RNU6-686P-201ENST00000364839 107 ntBASIC-0.87□□□□□ -2.55
XRCC3O43542 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.87□□□□□ -2.55
XRCC3O43542 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.87□□□□□ -2.55
XRCC3O43542 RNU6-303P-201ENST00000517091 106 ntBASIC-0.87□□□□□ -2.55
XRCC3O43542 Y_RNA.17-201ENST00000362433 111 ntBASIC-0.88□□□□□ -2.55
XRCC3O43542 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.88□□□□□ -2.55
XRCC3O43542 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.88□□□□□ -2.55
XRCC3O43542 AC006160.2-201ENST00000637708 154 ntBASIC-0.88□□□□□ -2.55
XRCC3O43542 RNU6-129P-201ENST00000391022 107 ntBASIC-0.89□□□□□ -2.55
XRCC3O43542 RNU6-881P-201ENST00000516813 102 ntBASIC-0.89□□□□□ -2.55
XRCC3O43542 RNU6-1131P-201ENST00000364955 107 ntBASIC-0.9□□□□□ -2.55
XRCC3O43542 RNU6-1134P-201ENST00000365156 101 ntBASIC-0.9□□□□□ -2.55
XRCC3O43542 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.9□□□□□ -2.55
XRCC3O43542 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.9□□□□□ -2.55
XRCC3O43542 AC022137.1-201ENST00000483735 151 ntBASIC-0.9□□□□□ -2.55
XRCC3O43542 MIR4464-201ENST00000580818 92 ntBASIC-0.9□□□□□ -2.55
XRCC3O43542 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.9□□□□□ -2.55
XRCC3O43542 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.9□□□□□ -2.55
XRCC3O43542 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.91□□□□□ -2.56
XRCC3O43542 RNU6-49P-201ENST00000384256 107 ntBASIC-0.91□□□□□ -2.56
XRCC3O43542 AC074348.1-201ENST00000426503 132 ntBASIC-0.91□□□□□ -2.56
XRCC3O43542 AP000533.3-201ENST00000447704 118 ntBASIC-0.91□□□□□ -2.56
XRCC3O43542 RNU7-154P-201ENST00000516194 62 ntBASIC-0.91□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 199.7 ms