Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 MIR4770-201ENST00000579149 58 ntBASIC-1.57□□□□□ -2.66
CLDN3O15551 MIR1468-201ENST00000410600 86 ntBASIC-1.58□□□□□ -2.66
CLDN3O15551 RNU7-154P-201ENST00000516194 62 ntBASIC-1.58□□□□□ -2.66
CLDN3O15551 MIR6739-201ENST00000622461 75 ntBASIC-1.58□□□□□ -2.66
CLDN3O15551 RNU6-226P-201ENST00000363778 107 ntBASIC-1.59□□□□□ -2.66
CLDN3O15551 RNU7-61P-201ENST00000515897 61 ntBASIC-1.59□□□□□ -2.66
CLDN3O15551 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.59□□□□□ -2.66
CLDN3O15551 SNORD115-33-201ENST00000363723 82 ntBASIC-1.6□□□□□ -2.67
CLDN3O15551 SNORA26.4-201ENST00000391188 123 ntBASIC-1.6□□□□□ -2.67
CLDN3O15551 AL450471.1-201ENST00000447509 127 ntBASIC-1.6□□□□□ -2.67
CLDN3O15551 RNU6-752P-201ENST00000516376 102 ntBASIC-1.6□□□□□ -2.67
CLDN3O15551 AC132825.6-201ENST00000638861 357 ntBASIC-1.6□□□□□ -2.67
CLDN3O15551 SNORD116-14-201ENST00000383894 92 ntBASIC-1.61□□□□□ -2.67
CLDN3O15551 SNORD116-17-201ENST00000383929 92 ntBASIC-1.61□□□□□ -2.67
CLDN3O15551 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.61□□□□□ -2.67
CLDN3O15551 SNORD116-15-201ENST00000384445 92 ntBASIC-1.61□□□□□ -2.67
CLDN3O15551 SNORD116-19-201ENST00000384729 92 ntBASIC-1.61□□□□□ -2.67
CLDN3O15551 MIR519A2-201ENST00000384990 87 ntBASIC-1.61□□□□□ -2.67
CLDN3O15551 MIR590-201ENST00000385008 97 ntBASIC-1.61□□□□□ -2.67
CLDN3O15551 MIR1302-5-201ENST00000408164 150 ntBASIC-1.61□□□□□ -2.67
CLDN3O15551 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.62□□□□□ -2.67
CLDN3O15551 SNORD63.1-201ENST00000516178 80 ntBASIC-1.62□□□□□ -2.67
CLDN3O15551 RNU7-153P-201ENST00000516455 62 ntBASIC-1.62□□□□□ -2.67
CLDN3O15551 MIR6129-201ENST00000616087 109 ntBASIC-1.63□□□□□ -2.67
CLDN3O15551 RNU6-746P-201ENST00000384112 109 ntBASIC-1.64□□□□□ -2.67
CLDN3O15551 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.64□□□□□ -2.67
CLDN3O15551 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.64□□□□□ -2.67
CLDN3O15551 RNU6-518P-201ENST00000516056 96 ntBASIC-1.64□□□□□ -2.67
CLDN3O15551 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.65□□□□□ -2.67
CLDN3O15551 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.65□□□□□ -2.67
CLDN3O15551 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.65□□□□□ -2.67
CLDN3O15551 RNU6-479P-201ENST00000516348 105 ntBASIC-1.65□□□□□ -2.67
CLDN3O15551 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.65□□□□□ -2.67
CLDN3O15551 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.65□□□□□ -2.67
CLDN3O15551 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.66□□□□□ -2.68
CLDN3O15551 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.66□□□□□ -2.68
CLDN3O15551 RNU6-340P-201ENST00000364005 107 ntBASIC-1.66□□□□□ -2.68
CLDN3O15551 RNU6-681P-201ENST00000364012 104 ntBASIC-1.66□□□□□ -2.68
CLDN3O15551 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.66□□□□□ -2.68
CLDN3O15551 MIR8485-201ENST00000401372 91 ntBASIC-1.66□□□□□ -2.68
CLDN3O15551 RNU6-162P-201ENST00000516228 103 ntBASIC-1.66□□□□□ -2.68
CLDN3O15551 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.66□□□□□ -2.68
CLDN3O15551 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.67□□□□□ -2.68
CLDN3O15551 AL021921.1-201ENST00000442774 93 ntBASIC-1.67□□□□□ -2.68
CLDN3O15551 AC090425.1-201ENST00000610007 140 ntBASIC-1.67□□□□□ -2.68
CLDN3O15551 U7.3-201ENST00000616123 62 ntBASIC-1.67□□□□□ -2.68
CLDN3O15551 SNORD114-3-201ENST00000364969 75 ntBASIC-1.68□□□□□ -2.68
CLDN3O15551 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.68□□□□□ -2.68
CLDN3O15551 U4.2-201ENST00000618561 85 ntBASIC-1.68□□□□□ -2.68
CLDN3O15551 MIR29B1-201ENST00000385015 81 ntBASIC-1.69□□□□□ -2.68
CLDN3O15551 RNU6-109P-201ENST00000516364 107 ntBASIC-1.69□□□□□ -2.68
CLDN3O15551 RNU6-184P-201ENST00000516514 107 ntBASIC-1.69□□□□□ -2.68
CLDN3O15551 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.69□□□□□ -2.68
CLDN3O15551 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.69□□□□□ -2.68
CLDN3O15551 SNORD115-22-201ENST00000364456 82 ntBASIC-1.71□□□□□ -2.68
CLDN3O15551 SNORD77.2-201ENST00000391045 68 ntBASIC-1.71□□□□□ -2.68
CLDN3O15551 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.72□□□□□ -2.68
CLDN3O15551 MIR519C-201ENST00000385053 87 ntBASIC-1.72□□□□□ -2.68
CLDN3O15551 RNU6-554P-201ENST00000410466 106 ntBASIC-1.72□□□□□ -2.68
CLDN3O15551 AL353691.2-201ENST00000443795 59 ntBASIC-1.72□□□□□ -2.68
CLDN3O15551 RNU6-794P-201ENST00000517261 64 ntBASIC-1.72□□□□□ -2.68
CLDN3O15551 MIR6818-201ENST00000621576 65 ntBASIC-1.72□□□□□ -2.68
CLDN3O15551 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.72□□□□□ -2.68
CLDN3O15551 SNORD115-27-201ENST00000364430 82 ntBASIC-1.73□□□□□ -2.69
CLDN3O15551 RNU6-106P-201ENST00000384405 107 ntBASIC-1.73□□□□□ -2.69
CLDN3O15551 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.73□□□□□ -2.69
CLDN3O15551 AL035461.1-201ENST00000421490 332 ntBASIC-1.73□□□□□ -2.69
CLDN3O15551 RNU6-540P-201ENST00000384622 101 ntBASIC-1.74□□□□□ -2.69
CLDN3O15551 RNU4-61P-201ENST00000411243 107 ntBASIC-1.74□□□□□ -2.69
CLDN3O15551 RNU6-983P-201ENST00000516004 103 ntBASIC-1.74□□□□□ -2.69
CLDN3O15551 RNU6-656P-201ENST00000516785 107 ntBASIC-1.74□□□□□ -2.69
CLDN3O15551 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.75□□□□□ -2.69
CLDN3O15551 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.75□□□□□ -2.69
CLDN3O15551 MIR4520-1-201ENST00000582609 70 ntBASIC-1.75□□□□□ -2.69
CLDN3O15551 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.76□□□□□ -2.69
CLDN3O15551 RNY4P27-201ENST00000363341 96 ntBASIC-1.77□□□□□ -2.69
CLDN3O15551 RNU6-704P-201ENST00000364162 103 ntBASIC-1.77□□□□□ -2.69
CLDN3O15551 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.77□□□□□ -2.69
CLDN3O15551 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.77□□□□□ -2.69
CLDN3O15551 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.77□□□□□ -2.69
CLDN3O15551 RNU6-576P-201ENST00000390854 102 ntBASIC-1.77□□□□□ -2.69
CLDN3O15551 MIR889-201ENST00000401280 79 ntBASIC-1.78□□□□□ -2.69
CLDN3O15551 RNU7-134P-201ENST00000458997 64 ntBASIC-1.78□□□□□ -2.69
CLDN3O15551 RNU6-732P-201ENST00000516033 103 ntBASIC-1.78□□□□□ -2.69
CLDN3O15551 MIR548AG1-201ENST00000579932 66 ntBASIC-1.78□□□□□ -2.69
CLDN3O15551 U2.7-201ENST00000619197 100 ntBASIC-1.78□□□□□ -2.69
CLDN3O15551 SNORA19-201ENST00000384737 128 ntBASIC-1.79□□□□□ -2.7
CLDN3O15551 RNU6-807P-201ENST00000516805 107 ntBASIC-1.79□□□□□ -2.7
CLDN3O15551 Y_RNA.703-201ENST00000516846 111 ntBASIC-1.79□□□□□ -2.7
CLDN3O15551 MIR3133-201ENST00000583157 78 ntBASIC-1.79□□□□□ -2.7
CLDN3O15551 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.8□□□□□ -2.7
CLDN3O15551 MTATP8P2-201ENST00000435212 202 ntBASIC-1.8□□□□□ -2.7
CLDN3O15551 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.8□□□□□ -2.7
CLDN3O15551 U7.5-201ENST00000517224 61 ntBASIC-1.8□□□□□ -2.7
CLDN3O15551 MIR6502-201ENST00000617296 76 ntBASIC-1.8□□□□□ -2.7
CLDN3O15551 RNA5SP26-201ENST00000362406 119 ntBASIC-1.81□□□□□ -2.7
CLDN3O15551 SNORD115-37-201ENST00000363768 82 ntBASIC-1.81□□□□□ -2.7
CLDN3O15551 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.81□□□□□ -2.7
CLDN3O15551 RNU6-959P-201ENST00000384671 107 ntBASIC-1.81□□□□□ -2.7
CLDN3O15551 RNU6-246P-201ENST00000384702 107 ntBASIC-1.81□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 220.8 ms