Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 HAR1A.1-201ENST00000459583 118 ntBASIC-1.71□□□□□ -2.68
AP3B1O00203 RNU6-80P-201ENST00000384195 107 ntBASIC-1.72□□□□□ -2.68
AP3B1O00203 RNU6-732P-201ENST00000516033 103 ntBASIC-1.72□□□□□ -2.68
AP3B1O00203 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.72□□□□□ -2.68
AP3B1O00203 RNU6-162P-201ENST00000516228 103 ntBASIC-1.72□□□□□ -2.68
AP3B1O00203 RNU6-659P-201ENST00000516454 104 ntBASIC-1.72□□□□□ -2.68
AP3B1O00203 MIR409-201ENST00000362237 79 ntBASIC-1.73□□□□□ -2.69
AP3B1O00203 RNA5SP26-201ENST00000362406 119 ntBASIC-1.73□□□□□ -2.69
AP3B1O00203 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.73□□□□□ -2.69
AP3B1O00203 MIR527-201ENST00000385244 85 ntBASIC-1.73□□□□□ -2.69
AP3B1O00203 MIR889-201ENST00000401280 79 ntBASIC-1.73□□□□□ -2.69
AP3B1O00203 AL021921.1-201ENST00000442774 93 ntBASIC-1.73□□□□□ -2.69
AP3B1O00203 RNU6-752P-201ENST00000516376 102 ntBASIC-1.73□□□□□ -2.69
AP3B1O00203 AP002795.1-201ENST00000534879 84 ntBASIC-1.73□□□□□ -2.69
AP3B1O00203 RNU6-880P-201ENST00000384526 107 ntBASIC-1.74□□□□□ -2.69
AP3B1O00203 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.74□□□□□ -2.69
AP3B1O00203 U7.5-201ENST00000517224 61 ntBASIC-1.74□□□□□ -2.69
AP3B1O00203 RNU6-537P-201ENST00000517277 103 ntBASIC-1.74□□□□□ -2.69
AP3B1O00203 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.74□□□□□ -2.69
AP3B1O00203 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.75□□□□□ -2.69
AP3B1O00203 RNU6-340P-201ENST00000364005 107 ntBASIC-1.75□□□□□ -2.69
AP3B1O00203 MIR590-201ENST00000385008 97 ntBASIC-1.75□□□□□ -2.69
AP3B1O00203 MIR6502-201ENST00000617296 76 ntBASIC-1.75□□□□□ -2.69
AP3B1O00203 MIR1246-201ENST00000636535 73 ntBASIC-1.75□□□□□ -2.69
AP3B1O00203 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.76□□□□□ -2.69
AP3B1O00203 SNORD116-21-201ENST00000384507 92 ntBASIC-1.76□□□□□ -2.69
AP3B1O00203 RNU6-246P-201ENST00000384702 107 ntBASIC-1.76□□□□□ -2.69
AP3B1O00203 AL035461.1-201ENST00000421490 332 ntBASIC-1.76□□□□□ -2.69
AP3B1O00203 MIR4520-1-201ENST00000582609 70 ntBASIC-1.76□□□□□ -2.69
AP3B1O00203 SNORD115-27-201ENST00000364430 82 ntBASIC-1.77□□□□□ -2.69
AP3B1O00203 RNU6-412P-201ENST00000516434 106 ntBASIC-1.77□□□□□ -2.69
AP3B1O00203 RNU6-656P-201ENST00000516785 107 ntBASIC-1.77□□□□□ -2.69
AP3B1O00203 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.78□□□□□ -2.69
AP3B1O00203 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.78□□□□□ -2.69
AP3B1O00203 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.78□□□□□ -2.69
AP3B1O00203 Y_RNA.506-201ENST00000384494 102 ntBASIC-1.78□□□□□ -2.69
AP3B1O00203 SNORD19-201ENST00000391191 68 ntBASIC-1.78□□□□□ -2.69
AP3B1O00203 RPL35AP4-201ENST00000412007 102 ntBASIC-1.78□□□□□ -2.69
AP3B1O00203 U7.3-201ENST00000616123 62 ntBASIC-1.78□□□□□ -2.69
AP3B1O00203 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.78□□□□□ -2.69
AP3B1O00203 RNU6-255P-201ENST00000516957 105 ntBASIC-1.79□□□□□ -2.7
AP3B1O00203 U2.7-201ENST00000619197 100 ntBASIC-1.79□□□□□ -2.7
AP3B1O00203 MIR5683-201ENST00000636514 76 ntBASIC-1.79□□□□□ -2.7
AP3B1O00203 RNU6-109P-201ENST00000516364 107 ntBASIC-1.8□□□□□ -2.7
AP3B1O00203 RNU6-184P-201ENST00000516514 107 ntBASIC-1.8□□□□□ -2.7
AP3B1O00203 MIR4490-201ENST00000582647 84 ntBASIC-1.8□□□□□ -2.7
AP3B1O00203 AC091912.2-201ENST00000624798 167 ntBASIC-1.8□□□□□ -2.7
AP3B1O00203 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.81□□□□□ -2.7
AP3B1O00203 RNA5SP266-201ENST00000410273 108 ntBASIC-1.81□□□□□ -2.7
AP3B1O00203 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.81□□□□□ -2.7
AP3B1O00203 MIR6874-201ENST00000635894 71 ntBASIC-1.81□□□□□ -2.7
AP3B1O00203 RNU6-681P-201ENST00000364012 104 ntBASIC-1.82□□□□□ -2.7
AP3B1O00203 MIR548C-201ENST00000384815 97 ntBASIC-1.82□□□□□ -2.7
AP3B1O00203 SNORD77.2-201ENST00000391045 68 ntBASIC-1.82□□□□□ -2.7
AP3B1O00203 MIR1285-2-201ENST00000408311 88 ntBASIC-1.82□□□□□ -2.7
AP3B1O00203 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.82□□□□□ -2.7
AP3B1O00203 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.83□□□□□ -2.7
AP3B1O00203 RNU6-907P-201ENST00000390924 102 ntBASIC-1.83□□□□□ -2.7
AP3B1O00203 RNU6-164P-201ENST00000364604 103 ntBASIC-1.84□□□□□ -2.7
AP3B1O00203 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.84□□□□□ -2.7
AP3B1O00203 MIR1302-5-201ENST00000408164 150 ntBASIC-1.84□□□□□ -2.7
AP3B1O00203 MIR548Q-201ENST00000408404 100 ntBASIC-1.84□□□□□ -2.7
AP3B1O00203 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.84□□□□□ -2.7
AP3B1O00203 RNU6-774P-201ENST00000363238 107 ntBASIC-1.85□□□□□ -2.71
AP3B1O00203 RNY1P5-201ENST00000383890 115 ntBASIC-1.85□□□□□ -2.71
AP3B1O00203 Y_RNA.464-201ENST00000384282 110 ntBASIC-1.85□□□□□ -2.71
AP3B1O00203 RNU6-540P-201ENST00000384622 101 ntBASIC-1.85□□□□□ -2.71
AP3B1O00203 AL078595.1-201ENST00000404458 226 ntBASIC-1.85□□□□□ -2.71
AP3B1O00203 RNU6-807P-201ENST00000516805 107 ntBASIC-1.85□□□□□ -2.71
AP3B1O00203 RNU6-1212P-201ENST00000517023 104 ntBASIC-1.85□□□□□ -2.71
AP3B1O00203 RNU6-645P-201ENST00000364649 106 ntBASIC-1.86□□□□□ -2.71
AP3B1O00203 MIR519C-201ENST00000385053 87 ntBASIC-1.86□□□□□ -2.71
AP3B1O00203 AC099654.10-201ENST00000640395 161 ntBASIC-1.86□□□□□ -2.71
AP3B1O00203 SNORD116-14-201ENST00000383894 92 ntBASIC-1.87□□□□□ -2.71
AP3B1O00203 SNORD116-17-201ENST00000383929 92 ntBASIC-1.87□□□□□ -2.71
AP3B1O00203 SNORD116-15-201ENST00000384445 92 ntBASIC-1.87□□□□□ -2.71
AP3B1O00203 SNORD116-19-201ENST00000384729 92 ntBASIC-1.87□□□□□ -2.71
AP3B1O00203 RNA5SP86-201ENST00000390869 98 ntBASIC-1.87□□□□□ -2.71
AP3B1O00203 RNU6-158P-201ENST00000517104 100 ntBASIC-1.87□□□□□ -2.71
AP3B1O00203 RNU6-554P-201ENST00000410466 106 ntBASIC-1.88□□□□□ -2.71
AP3B1O00203 AC090616.4-201ENST00000448026 115 ntBASIC-1.88□□□□□ -2.71
AP3B1O00203 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.89□□□□□ -2.71
AP3B1O00203 RNU6-478P-201ENST00000363904 110 ntBASIC-1.89□□□□□ -2.71
AP3B1O00203 SNORA19-201ENST00000384737 128 ntBASIC-1.89□□□□□ -2.71
AP3B1O00203 RNU6-983P-201ENST00000516004 103 ntBASIC-1.89□□□□□ -2.71
AP3B1O00203 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.9□□□□□ -2.71
AP3B1O00203 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.9□□□□□ -2.71
AP3B1O00203 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.9□□□□□ -2.71
AP3B1O00203 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.91□□□□□ -2.72
AP3B1O00203 MIR4441-201ENST00000582623 100 ntBASIC-1.91□□□□□ -2.72
AP3B1O00203 MIR198-201ENST00000637333 62 ntBASIC-1.91□□□□□ -2.72
AP3B1O00203 MIR365A-201ENST00000362260 87 ntBASIC-1.92□□□□□ -2.72
AP3B1O00203 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.92□□□□□ -2.72
AP3B1O00203 RNU6-458P-201ENST00000384179 107 ntBASIC-1.92□□□□□ -2.72
AP3B1O00203 RNU6-106P-201ENST00000384405 107 ntBASIC-1.92□□□□□ -2.72
AP3B1O00203 U6.58-201ENST00000613107 107 ntBASIC-1.92□□□□□ -2.72
AP3B1O00203 SNORD18.1-201ENST00000363807 70 ntBASIC-1.93□□□□□ -2.72
AP3B1O00203 MIR548H1-201ENST00000408610 102 ntBASIC-1.93□□□□□ -2.72
AP3B1O00203 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.93□□□□□ -2.72
AP3B1O00203 RNU6-330P-201ENST00000363015 107 ntBASIC-1.94□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms