Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 U6.58-201ENST00000613107 107 ntBASIC-2.27□□□□□ -2.77
TRAV3A0A0B4J244 Y_RNA.47-201ENST00000362697 108 ntBASIC-2.28□□□□□ -2.77
TRAV3A0A0B4J244 Y_RNA.71-201ENST00000362892 104 ntBASIC-2.28□□□□□ -2.77
TRAV3A0A0B4J244 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.28□□□□□ -2.77
TRAV3A0A0B4J244 RNU6-681P-201ENST00000364012 104 ntBASIC-2.28□□□□□ -2.77
TRAV3A0A0B4J244 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.28□□□□□ -2.77
TRAV3A0A0B4J244 MIR487B-201ENST00000385021 84 ntBASIC-2.28□□□□□ -2.77
TRAV3A0A0B4J244 Y_RNA.680-201ENST00000516441 93 ntBASIC-2.28□□□□□ -2.77
TRAV3A0A0B4J244 Y_RNA.705-201ENST00000516862 110 ntBASIC-2.28□□□□□ -2.77
TRAV3A0A0B4J244 AC012531.4-201ENST00000616509 177 ntBASIC-2.28□□□□□ -2.77
TRAV3A0A0B4J244 Y_RNA.29-201ENST00000362570 113 ntBASIC-2.29□□□□□ -2.78
TRAV3A0A0B4J244 Y_RNA.74-201ENST00000362911 99 ntBASIC-2.29□□□□□ -2.78
TRAV3A0A0B4J244 Y_RNA.502-201ENST00000384478 113 ntBASIC-2.29□□□□□ -2.78
TRAV3A0A0B4J244 Y_RNA.535-201ENST00000384612 99 ntBASIC-2.29□□□□□ -2.78
TRAV3A0A0B4J244 MIR548A3-201ENST00000385297 97 ntBASIC-2.29□□□□□ -2.78
TRAV3A0A0B4J244 AC108019.1-201ENST00000512540 175 ntBASIC-2.29□□□□□ -2.78
TRAV3A0A0B4J244 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.29□□□□□ -2.78
TRAV3A0A0B4J244 RNU6-1061P-201ENST00000516530 99 ntBASIC-2.29□□□□□ -2.78
TRAV3A0A0B4J244 RNU6-980P-201ENST00000516925 103 ntBASIC-2.29□□□□□ -2.78
TRAV3A0A0B4J244 MIR548X2-201ENST00000579776 100 ntBASIC-2.29□□□□□ -2.78
TRAV3A0A0B4J244 Y_RNA.236-201ENST00000364427 111 ntBASIC-2.3□□□□□ -2.78
TRAV3A0A0B4J244 Y_RNA.422-201ENST00000384054 114 ntBASIC-2.3□□□□□ -2.78
TRAV3A0A0B4J244 RNU6-630P-201ENST00000391258 106 ntBASIC-2.3□□□□□ -2.78
TRAV3A0A0B4J244 MIR1236-201ENST00000408340 102 ntBASIC-2.3□□□□□ -2.78
TRAV3A0A0B4J244 Y_RNA.630-201ENST00000411370 108 ntBASIC-2.3□□□□□ -2.78
TRAV3A0A0B4J244 AL035461.1-201ENST00000421490 332 ntBASIC-2.3□□□□□ -2.78
TRAV3A0A0B4J244 AL450471.1-201ENST00000447509 127 ntBASIC-2.3□□□□□ -2.78
TRAV3A0A0B4J244 RNU6-1262P-201ENST00000516217 96 ntBASIC-2.3□□□□□ -2.78
TRAV3A0A0B4J244 RNU6-841P-201ENST00000383872 107 ntBASIC-2.31□□□□□ -2.78
TRAV3A0A0B4J244 RNU6-887P-201ENST00000410660 100 ntBASIC-2.31□□□□□ -2.78
TRAV3A0A0B4J244 RNU6-795P-201ENST00000516323 103 ntBASIC-2.31□□□□□ -2.78
TRAV3A0A0B4J244 SNORA20.1-201ENST00000364790 130 ntBASIC-2.32□□□□□ -2.78
TRAV3A0A0B4J244 MIR520D-201ENST00000385002 87 ntBASIC-2.32□□□□□ -2.78
TRAV3A0A0B4J244 Y_RNA.662-201ENST00000516028 97 ntBASIC-2.32□□□□□ -2.78
TRAV3A0A0B4J244 RNU7-174P-201ENST00000516248 59 ntBASIC-2.32□□□□□ -2.78
TRAV3A0A0B4J244 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.33□□□□□ -2.78
TRAV3A0A0B4J244 Y_RNA.149-201ENST00000363558 117 ntBASIC-2.33□□□□□ -2.78
TRAV3A0A0B4J244 Y_RNA.459-201ENST00000384251 102 ntBASIC-2.33□□□□□ -2.78
TRAV3A0A0B4J244 Y_RNA.96-201ENST00000363092 109 ntBASIC-2.34□□□□□ -2.78
TRAV3A0A0B4J244 SNORD116-10-201ENST00000363791 102 ntBASIC-2.34□□□□□ -2.78
TRAV3A0A0B4J244 RNU6-645P-201ENST00000364649 106 ntBASIC-2.34□□□□□ -2.78
TRAV3A0A0B4J244 RNU7-120P-201ENST00000459334 63 ntBASIC-2.34□□□□□ -2.78
TRAV3A0A0B4J244 MIR429-201ENST00000362106 83 ntBASIC-2.35□□□□□ -2.79
TRAV3A0A0B4J244 RNU6-682P-201ENST00000363843 106 ntBASIC-2.35□□□□□ -2.79
TRAV3A0A0B4J244 Y_RNA.282-201ENST00000364793 102 ntBASIC-2.35□□□□□ -2.79
TRAV3A0A0B4J244 RNU6-537P-201ENST00000517277 103 ntBASIC-2.35□□□□□ -2.79
TRAV3A0A0B4J244 AC062037.2-201ENST00000610137 73 ntBASIC-2.35□□□□□ -2.79
TRAV3A0A0B4J244 MIR569-201ENST00000385228 96 ntBASIC-2.36□□□□□ -2.79
TRAV3A0A0B4J244 RNU6-587P-201ENST00000391282 106 ntBASIC-2.36□□□□□ -2.79
TRAV3A0A0B4J244 RNU6-772P-201ENST00000516042 105 ntBASIC-2.36□□□□□ -2.79
TRAV3A0A0B4J244 RNU6-861P-201ENST00000516745 106 ntBASIC-2.36□□□□□ -2.79
TRAV3A0A0B4J244 MIR3123-201ENST00000583417 75 ntBASIC-2.36□□□□□ -2.79
TRAV3A0A0B4J244 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.36□□□□□ -2.79
TRAV3A0A0B4J244 MIR664B-201ENST00000626756 61 ntBASIC-2.36□□□□□ -2.79
TRAV3A0A0B4J244 AL157777.2-201ENST00000258070 137 ntBASIC-2.37□□□□□ -2.79
TRAV3A0A0B4J244 RNU6-394P-201ENST00000410735 107 ntBASIC-2.37□□□□□ -2.79
TRAV3A0A0B4J244 MIR3139-201ENST00000579145 76 ntBASIC-2.37□□□□□ -2.79
TRAV3A0A0B4J244 Y_RNA.11-201ENST00000362375 109 ntBASIC-2.38□□□□□ -2.79
TRAV3A0A0B4J244 RNU6-1160P-201ENST00000384546 104 ntBASIC-2.38□□□□□ -2.79
TRAV3A0A0B4J244 MIR548AM-201ENST00000584298 74 ntBASIC-2.38□□□□□ -2.79
TRAV3A0A0B4J244 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-2.38□□□□□ -2.79
TRAV3A0A0B4J244 Y_RNA.109-201ENST00000363215 102 ntBASIC-2.39□□□□□ -2.79
TRAV3A0A0B4J244 SNORD77.2-201ENST00000391045 68 ntBASIC-2.39□□□□□ -2.79
TRAV3A0A0B4J244 Y_RNA.649-201ENST00000459077 103 ntBASIC-2.39□□□□□ -2.79
TRAV3A0A0B4J244 SCARNA23-201ENST00000516060 130 ntBASIC-2.39□□□□□ -2.79
TRAV3A0A0B4J244 RNY4-201ENST00000516507 96 ntBASIC-2.39□□□□□ -2.79
TRAV3A0A0B4J244 AC120024.2-201ENST00000576526 175 ntBASIC-2.39□□□□□ -2.79
TRAV3A0A0B4J244 RNU6-598P-201ENST00000364017 105 ntBASIC-2.4□□□□□ -2.79
TRAV3A0A0B4J244 Y_RNA.297-201ENST00000364950 91 ntBASIC-2.4□□□□□ -2.79
TRAV3A0A0B4J244 SNORD116-18-201ENST00000383961 92 ntBASIC-2.4□□□□□ -2.79
TRAV3A0A0B4J244 Y_RNA.400-201ENST00000383963 111 ntBASIC-2.4□□□□□ -2.79
TRAV3A0A0B4J244 Y_RNA.609-201ENST00000410669 89 ntBASIC-2.4□□□□□ -2.79
TRAV3A0A0B4J244 AC044792.1-201ENST00000593294 196 ntBASIC-2.4□□□□□ -2.79
TRAV3A0A0B4J244 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.4□□□□□ -2.79
TRAV3A0A0B4J244 Y_RNA.264-201ENST00000364665 102 ntBASIC-2.41□□□□□ -2.8
TRAV3A0A0B4J244 RNU6-904P-201ENST00000516206 101 ntBASIC-2.41□□□□□ -2.8
TRAV3A0A0B4J244 RNU7-153P-201ENST00000516455 62 ntBASIC-2.41□□□□□ -2.8
TRAV3A0A0B4J244 MIR4756-201ENST00000577874 78 ntBASIC-2.41□□□□□ -2.8
TRAV3A0A0B4J244 Y_RNA.61-201ENST00000362835 102 ntBASIC-2.42□□□□□ -2.8
TRAV3A0A0B4J244 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.42□□□□□ -2.8
TRAV3A0A0B4J244 Y_RNA.281-201ENST00000364774 94 ntBASIC-2.43□□□□□ -2.8
TRAV3A0A0B4J244 Y_RNA.325-201ENST00000365171 122 ntBASIC-2.43□□□□□ -2.8
TRAV3A0A0B4J244 MTCYBP9-201ENST00000431021 303 ntBASIC-2.43□□□□□ -2.8
TRAV3A0A0B4J244 Y_RNA.701-201ENST00000516812 110 ntBASIC-2.43□□□□□ -2.8
TRAV3A0A0B4J244 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.43□□□□□ -2.8
TRAV3A0A0B4J244 MT-TM-201ENST00000387377 68 ntBASIC-2.44□□□□□ -2.8
TRAV3A0A0B4J244 RNU6-1089P-201ENST00000516473 104 ntBASIC-2.44□□□□□ -2.8
TRAV3A0A0B4J244 RNU6-698P-201ENST00000363523 107 ntBASIC-2.45□□□□□ -2.8
TRAV3A0A0B4J244 RNU6-563P-201ENST00000364872 108 ntBASIC-2.45□□□□□ -2.8
TRAV3A0A0B4J244 RNU6-34P-201ENST00000364874 107 ntBASIC-2.45□□□□□ -2.8
TRAV3A0A0B4J244 MIR3170-201ENST00000582699 77 ntBASIC-2.45□□□□□ -2.8
TRAV3A0A0B4J244 MIR4801-201ENST00000582704 82 ntBASIC-2.45□□□□□ -2.8
TRAV3A0A0B4J244 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.46□□□□□ -2.8
TRAV3A0A0B4J244 MIR548C-201ENST00000384815 97 ntBASIC-2.46□□□□□ -2.8
TRAV3A0A0B4J244 MIR568-201ENST00000385036 95 ntBASIC-2.47□□□□□ -2.8
TRAV3A0A0B4J244 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-2.47□□□□□ -2.8
TRAV3A0A0B4J244 U4.4-201ENST00000620626 117 ntBASIC-2.47□□□□□ -2.8
TRAV3A0A0B4J244 MIR3914-2-201ENST00000637339 95 ntBASIC-2.47□□□□□ -2.8
TRAV3A0A0B4J244 RNU6-574P-201ENST00000384265 107 ntBASIC-2.48□□□□□ -2.81
TRAV3A0A0B4J244 RNU6-1111P-201ENST00000391118 107 ntBASIC-2.48□□□□□ -2.81
Retrieved 100 of 98,524 protein–RNA pairs in 199.8 ms