Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 LITAF-211ENST00000572255 516 ntTSL 4 BASIC21.22■□□□□ 0.99
PTCH2Q9Y6C5 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
PTCH2Q9Y6C5 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC21.22■□□□□ 0.99
PTCH2Q9Y6C5 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.22■□□□□ 0.99
PTCH2Q9Y6C5 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
PTCH2Q9Y6C5 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PTCH2Q9Y6C5 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
PTCH2Q9Y6C5 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.22■□□□□ 0.99
PTCH2Q9Y6C5 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTCH2Q9Y6C5 ZNF259P1-201ENST00000407656 1365 ntBASIC21.22■□□□□ 0.99
PTCH2Q9Y6C5 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTCH2Q9Y6C5 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
PTCH2Q9Y6C5 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTCH2Q9Y6C5 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PTCH2Q9Y6C5 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PTCH2Q9Y6C5 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.21■□□□□ 0.99
PTCH2Q9Y6C5 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTCH2Q9Y6C5 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTCH2Q9Y6C5 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
PTCH2Q9Y6C5 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTCH2Q9Y6C5 IGHGP-201ENST00000390555 1178 ntBASIC21.21■□□□□ 0.99
PTCH2Q9Y6C5 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PTCH2Q9Y6C5 AC018712.1-201ENST00000455767 687 ntBASIC21.21■□□□□ 0.99
PTCH2Q9Y6C5 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC21.21■□□□□ 0.99
PTCH2Q9Y6C5 AC104390.1-201ENST00000555663 520 ntBASIC21.21■□□□□ 0.99
PTCH2Q9Y6C5 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC21.21■□□□□ 0.99
PTCH2Q9Y6C5 AC027796.2-201ENST00000575326 344 ntBASIC21.21■□□□□ 0.99
PTCH2Q9Y6C5 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.21■□□□□ 0.99
PTCH2Q9Y6C5 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
PTCH2Q9Y6C5 AC020907.5-201ENST00000624372 1936 ntBASIC21.21■□□□□ 0.99
PTCH2Q9Y6C5 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PTCH2Q9Y6C5 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC21.21■□□□□ 0.99
PTCH2Q9Y6C5 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTCH2Q9Y6C5 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.21■□□□□ 0.99
PTCH2Q9Y6C5 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.21■□□□□ 0.99
PTCH2Q9Y6C5 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.2■□□□□ 0.99
PTCH2Q9Y6C5 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21.2■□□□□ 0.99
PTCH2Q9Y6C5 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PTCH2Q9Y6C5 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.2■□□□□ 0.98
PTCH2Q9Y6C5 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
PTCH2Q9Y6C5 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PTCH2Q9Y6C5 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.2■□□□□ 0.98
PTCH2Q9Y6C5 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PTCH2Q9Y6C5 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PTCH2Q9Y6C5 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PTCH2Q9Y6C5 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PTCH2Q9Y6C5 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PTCH2Q9Y6C5 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PTCH2Q9Y6C5 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC21.2■□□□□ 0.98
PTCH2Q9Y6C5 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC21.2■□□□□ 0.98
PTCH2Q9Y6C5 IRF8-202ENST00000562492 946 ntTSL 3 BASIC21.2■□□□□ 0.98
PTCH2Q9Y6C5 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PTCH2Q9Y6C5 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC21.2■□□□□ 0.98
PTCH2Q9Y6C5 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC21.2■□□□□ 0.98
PTCH2Q9Y6C5 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PTCH2Q9Y6C5 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
PTCH2Q9Y6C5 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
PTCH2Q9Y6C5 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PTCH2Q9Y6C5 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PTCH2Q9Y6C5 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTCH2Q9Y6C5 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PTCH2Q9Y6C5 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTCH2Q9Y6C5 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
PTCH2Q9Y6C5 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
PTCH2Q9Y6C5 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PTCH2Q9Y6C5 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC21.19■□□□□ 0.98
PTCH2Q9Y6C5 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTCH2Q9Y6C5 PGAM5P1-201ENST00000518923 814 ntBASIC21.19■□□□□ 0.98
PTCH2Q9Y6C5 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
PTCH2Q9Y6C5 AC140113.2-201ENST00000604370 208 ntBASIC21.19■□□□□ 0.98
PTCH2Q9Y6C5 AL591684.3-201ENST00000605187 298 ntBASIC21.19■□□□□ 0.98
PTCH2Q9Y6C5 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PTCH2Q9Y6C5 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
PTCH2Q9Y6C5 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTCH2Q9Y6C5 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTCH2Q9Y6C5 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC21.19■□□□□ 0.98
PTCH2Q9Y6C5 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PTCH2Q9Y6C5 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTCH2Q9Y6C5 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
PTCH2Q9Y6C5 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTCH2Q9Y6C5 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.18■□□□□ 0.98
PTCH2Q9Y6C5 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTCH2Q9Y6C5 AL691432.2-201ENST00000607222 2038 ntBASIC21.18■□□□□ 0.98
PTCH2Q9Y6C5 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.18■□□□□ 0.98
PTCH2Q9Y6C5 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTCH2Q9Y6C5 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTCH2Q9Y6C5 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC21.18■□□□□ 0.98
PTCH2Q9Y6C5 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC21.18■□□□□ 0.98
PTCH2Q9Y6C5 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC21.18■□□□□ 0.98
PTCH2Q9Y6C5 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC21.18■□□□□ 0.98
PTCH2Q9Y6C5 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC21.18■□□□□ 0.98
PTCH2Q9Y6C5 AC008608.2-201ENST00000606089 416 ntBASIC21.18■□□□□ 0.98
PTCH2Q9Y6C5 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTCH2Q9Y6C5 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
PTCH2Q9Y6C5 KRT8P3-201ENST00000519669 1449 ntBASIC21.18■□□□□ 0.98
PTCH2Q9Y6C5 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
PTCH2Q9Y6C5 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTCH2Q9Y6C5 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.18■□□□□ 0.98
PTCH2Q9Y6C5 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTCH2Q9Y6C5 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms