Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clip4Q8CI96 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clip4Q8CI96 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Clip4Q8CI96 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clip4Q8CI96 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clip4Q8CI96 Gm7284-201ENSMUST00000131667 944 ntBASIC16.14■□□□□ 0.17
Clip4Q8CI96 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.14■□□□□ 0.17
Clip4Q8CI96 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clip4Q8CI96 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Clip4Q8CI96 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Clip4Q8CI96 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Clip4Q8CI96 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clip4Q8CI96 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
Clip4Q8CI96 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Clip4Q8CI96 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Clip4Q8CI96 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clip4Q8CI96 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clip4Q8CI96 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Clip4Q8CI96 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clip4Q8CI96 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Clip4Q8CI96 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clip4Q8CI96 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clip4Q8CI96 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clip4Q8CI96 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clip4Q8CI96 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Clip4Q8CI96 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Clip4Q8CI96 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clip4Q8CI96 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clip4Q8CI96 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clip4Q8CI96 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clip4Q8CI96 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Clip4Q8CI96 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Clip4Q8CI96 Gm27704-201ENSMUST00000185094 107 ntBASIC16.13■□□□□ 0.17
Clip4Q8CI96 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.13■□□□□ 0.17
Clip4Q8CI96 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.13■□□□□ 0.17
Clip4Q8CI96 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clip4Q8CI96 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clip4Q8CI96 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clip4Q8CI96 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clip4Q8CI96 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clip4Q8CI96 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clip4Q8CI96 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Clip4Q8CI96 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clip4Q8CI96 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Clip4Q8CI96 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clip4Q8CI96 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clip4Q8CI96 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.13■□□□□ 0.17
Clip4Q8CI96 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clip4Q8CI96 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clip4Q8CI96 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Clip4Q8CI96 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clip4Q8CI96 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Clip4Q8CI96 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Clip4Q8CI96 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.12■□□□□ 0.17
Clip4Q8CI96 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clip4Q8CI96 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clip4Q8CI96 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Clip4Q8CI96 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clip4Q8CI96 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clip4Q8CI96 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Clip4Q8CI96 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Clip4Q8CI96 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clip4Q8CI96 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clip4Q8CI96 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clip4Q8CI96 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clip4Q8CI96 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clip4Q8CI96 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Clip4Q8CI96 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clip4Q8CI96 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clip4Q8CI96 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clip4Q8CI96 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clip4Q8CI96 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Clip4Q8CI96 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Clip4Q8CI96 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clip4Q8CI96 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Clip4Q8CI96 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clip4Q8CI96 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Clip4Q8CI96 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clip4Q8CI96 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clip4Q8CI96 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.11■□□□□ 0.17
Clip4Q8CI96 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Clip4Q8CI96 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clip4Q8CI96 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.11■□□□□ 0.17
Clip4Q8CI96 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Clip4Q8CI96 Gm44450-201ENSMUST00000199528 114 ntBASIC16.11■□□□□ 0.17
Clip4Q8CI96 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.11■□□□□ 0.17
Clip4Q8CI96 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clip4Q8CI96 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.11■□□□□ 0.17
Clip4Q8CI96 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.11■□□□□ 0.17
Clip4Q8CI96 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clip4Q8CI96 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clip4Q8CI96 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clip4Q8CI96 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Clip4Q8CI96 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clip4Q8CI96 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Clip4Q8CI96 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.11■□□□□ 0.17
Clip4Q8CI96 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Clip4Q8CI96 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clip4Q8CI96 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Clip4Q8CI96 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms