Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.05□□□□□ -0.16
Slc5a7Q8BGY9 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slc5a7Q8BGY9 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slc5a7Q8BGY9 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.05□□□□□ -0.16
Slc5a7Q8BGY9 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slc5a7Q8BGY9 Gm7638-201ENSMUST00000121348 967 ntBASIC14.05□□□□□ -0.16
Slc5a7Q8BGY9 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC14.05□□□□□ -0.16
Slc5a7Q8BGY9 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Slc5a7Q8BGY9 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC14.05□□□□□ -0.16
Slc5a7Q8BGY9 Gm43183-201ENSMUST00000200632 547 ntBASIC14.05□□□□□ -0.16
Slc5a7Q8BGY9 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC14.05□□□□□ -0.16
Slc5a7Q8BGY9 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slc5a7Q8BGY9 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slc5a7Q8BGY9 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slc5a7Q8BGY9 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slc5a7Q8BGY9 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slc5a7Q8BGY9 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slc5a7Q8BGY9 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Slc5a7Q8BGY9 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Slc5a7Q8BGY9 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Slc5a7Q8BGY9 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slc5a7Q8BGY9 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slc5a7Q8BGY9 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Slc5a7Q8BGY9 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slc5a7Q8BGY9 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slc5a7Q8BGY9 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Slc5a7Q8BGY9 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slc5a7Q8BGY9 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slc5a7Q8BGY9 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slc5a7Q8BGY9 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slc5a7Q8BGY9 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc5a7Q8BGY9 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc5a7Q8BGY9 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc5a7Q8BGY9 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc5a7Q8BGY9 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.04□□□□□ -0.16
Slc5a7Q8BGY9 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc5a7Q8BGY9 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Slc5a7Q8BGY9 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Slc5a7Q8BGY9 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.04□□□□□ -0.16
Slc5a7Q8BGY9 Gm42569-201ENSMUST00000200539 472 ntBASIC14.04□□□□□ -0.16
Slc5a7Q8BGY9 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC14.04□□□□□ -0.16
Slc5a7Q8BGY9 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Slc5a7Q8BGY9 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc5a7Q8BGY9 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Slc5a7Q8BGY9 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc5a7Q8BGY9 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc5a7Q8BGY9 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Slc5a7Q8BGY9 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc5a7Q8BGY9 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc5a7Q8BGY9 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc5a7Q8BGY9 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.03□□□□□ -0.16
Slc5a7Q8BGY9 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc5a7Q8BGY9 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc5a7Q8BGY9 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc5a7Q8BGY9 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc5a7Q8BGY9 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc5a7Q8BGY9 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Slc5a7Q8BGY9 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc5a7Q8BGY9 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc5a7Q8BGY9 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC14.03□□□□□ -0.16
Slc5a7Q8BGY9 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc5a7Q8BGY9 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC14.03□□□□□ -0.16
Slc5a7Q8BGY9 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc5a7Q8BGY9 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Slc5a7Q8BGY9 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Slc5a7Q8BGY9 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc5a7Q8BGY9 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc5a7Q8BGY9 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc5a7Q8BGY9 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc5a7Q8BGY9 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc5a7Q8BGY9 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc5a7Q8BGY9 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc5a7Q8BGY9 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Slc5a7Q8BGY9 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Slc5a7Q8BGY9 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Slc5a7Q8BGY9 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Slc5a7Q8BGY9 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Slc5a7Q8BGY9 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Slc5a7Q8BGY9 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Slc5a7Q8BGY9 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Slc5a7Q8BGY9 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
Slc5a7Q8BGY9 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Slc5a7Q8BGY9 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Slc5a7Q8BGY9 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Slc5a7Q8BGY9 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Slc5a7Q8BGY9 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Slc5a7Q8BGY9 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Slc5a7Q8BGY9 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Slc5a7Q8BGY9 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Slc5a7Q8BGY9 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Slc5a7Q8BGY9 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC14.02□□□□□ -0.17
Slc5a7Q8BGY9 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Slc5a7Q8BGY9 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Slc5a7Q8BGY9 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Slc5a7Q8BGY9 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Slc5a7Q8BGY9 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Slc5a7Q8BGY9 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Slc5a7Q8BGY9 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Slc5a7Q8BGY9 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Slc5a7Q8BGY9 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms