Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL13A1Q5TAT6 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL13A1Q5TAT6 CCS-201ENST00000310190 942 ntTSL 5 BASIC21.14■□□□□ 0.97
COL13A1Q5TAT6 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL13A1Q5TAT6 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL13A1Q5TAT6 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC21.14■□□□□ 0.97
COL13A1Q5TAT6 AP000344.2-201ENST00000512987 629 ntBASIC21.14■□□□□ 0.97
COL13A1Q5TAT6 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
COL13A1Q5TAT6 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC21.14■□□□□ 0.97
COL13A1Q5TAT6 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC21.14■□□□□ 0.97
COL13A1Q5TAT6 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC21.14■□□□□ 0.97
COL13A1Q5TAT6 TMED1-207ENST00000591695 809 ntTSL 5 BASIC21.14■□□□□ 0.97
COL13A1Q5TAT6 AC107918.4-202ENST00000641623 219 ntBASIC21.14■□□□□ 0.97
COL13A1Q5TAT6 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL13A1Q5TAT6 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL13A1Q5TAT6 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL13A1Q5TAT6 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
COL13A1Q5TAT6 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
COL13A1Q5TAT6 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.13■□□□□ 0.97
COL13A1Q5TAT6 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.13■□□□□ 0.97
COL13A1Q5TAT6 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COL13A1Q5TAT6 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
COL13A1Q5TAT6 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
COL13A1Q5TAT6 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
COL13A1Q5TAT6 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
COL13A1Q5TAT6 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COL13A1Q5TAT6 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC21.13■□□□□ 0.97
COL13A1Q5TAT6 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC21.13■□□□□ 0.97
COL13A1Q5TAT6 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC21.13■□□□□ 0.97
COL13A1Q5TAT6 AC109322.1-201ENST00000524499 1264 ntBASIC21.13■□□□□ 0.97
COL13A1Q5TAT6 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC21.13■□□□□ 0.97
COL13A1Q5TAT6 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC21.13■□□□□ 0.97
COL13A1Q5TAT6 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
COL13A1Q5TAT6 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL13A1Q5TAT6 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL13A1Q5TAT6 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL13A1Q5TAT6 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL13A1Q5TAT6 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL13A1Q5TAT6 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COL13A1Q5TAT6 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COL13A1Q5TAT6 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COL13A1Q5TAT6 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
COL13A1Q5TAT6 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
COL13A1Q5TAT6 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
COL13A1Q5TAT6 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
COL13A1Q5TAT6 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC21.12■□□□□ 0.97
COL13A1Q5TAT6 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.12■□□□□ 0.97
COL13A1Q5TAT6 NAA50-208ENST00000497255 789 ntTSL 5 BASIC21.12■□□□□ 0.97
COL13A1Q5TAT6 AC010240.3-201ENST00000607688 395 ntBASIC21.12■□□□□ 0.97
COL13A1Q5TAT6 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COL13A1Q5TAT6 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COL13A1Q5TAT6 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.12■□□□□ 0.97
COL13A1Q5TAT6 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COL13A1Q5TAT6 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
COL13A1Q5TAT6 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL13A1Q5TAT6 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
COL13A1Q5TAT6 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL13A1Q5TAT6 FAM86GP-201ENST00000448322 971 ntBASIC21.11■□□□□ 0.97
COL13A1Q5TAT6 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC21.11■□□□□ 0.97
COL13A1Q5TAT6 DUX4L27-201ENST00000554796 1261 ntBASIC21.11■□□□□ 0.97
COL13A1Q5TAT6 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
COL13A1Q5TAT6 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL13A1Q5TAT6 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
COL13A1Q5TAT6 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
COL13A1Q5TAT6 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
COL13A1Q5TAT6 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL13A1Q5TAT6 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
COL13A1Q5TAT6 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL13A1Q5TAT6 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL13A1Q5TAT6 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.1■□□□□ 0.97
COL13A1Q5TAT6 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL13A1Q5TAT6 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
COL13A1Q5TAT6 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL13A1Q5TAT6 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21.1■□□□□ 0.97
COL13A1Q5TAT6 HLA-DPB2-205ENST00000435074 1188 ntBASIC21.1■□□□□ 0.97
COL13A1Q5TAT6 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC21.1■□□□□ 0.97
COL13A1Q5TAT6 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC21.1■□□□□ 0.97
COL13A1Q5TAT6 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC21.1■□□□□ 0.97
COL13A1Q5TAT6 MCCD1P1-208ENST00000445732 328 ntBASIC21.1■□□□□ 0.97
COL13A1Q5TAT6 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
COL13A1Q5TAT6 DAD1-205ENST00000543337 501 ntTSL 3 BASIC21.1■□□□□ 0.97
COL13A1Q5TAT6 COX11-202ENST00000571584 1108 ntTSL 2 BASIC21.1■□□□□ 0.97
COL13A1Q5TAT6 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC21.1■□□□□ 0.97
COL13A1Q5TAT6 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL13A1Q5TAT6 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COL13A1Q5TAT6 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
COL13A1Q5TAT6 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL13A1Q5TAT6 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL13A1Q5TAT6 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
COL13A1Q5TAT6 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL13A1Q5TAT6 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.09■□□□□ 0.97
COL13A1Q5TAT6 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.09■□□□□ 0.97
COL13A1Q5TAT6 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL13A1Q5TAT6 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL13A1Q5TAT6 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC21.09■□□□□ 0.97
COL13A1Q5TAT6 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC21.09■□□□□ 0.97
COL13A1Q5TAT6 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC21.09■□□□□ 0.97
COL13A1Q5TAT6 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC21.09■□□□□ 0.97
COL13A1Q5TAT6 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC21.09■□□□□ 0.97
COL13A1Q5TAT6 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms