Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMIM17P0DL12 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMIM17P0DL12 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC14.01□□□□□ -0.17
SMIM17P0DL12 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SMIM17P0DL12 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC14.01□□□□□ -0.17
SMIM17P0DL12 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMIM17P0DL12 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMIM17P0DL12 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC14.01□□□□□ -0.17
SMIM17P0DL12 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SMIM17P0DL12 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMIM17P0DL12 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SMIM17P0DL12 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
SMIM17P0DL12 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMIM17P0DL12 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
SMIM17P0DL12 AL390719.1-204ENST00000412397 1219 ntBASIC14.01□□□□□ -0.17
SMIM17P0DL12 AL355472.2-201ENST00000422958 438 ntBASIC14.01□□□□□ -0.17
SMIM17P0DL12 CYP2T1P-201ENST00000432607 1285 ntBASIC14.01□□□□□ -0.17
SMIM17P0DL12 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC14.01□□□□□ -0.17
SMIM17P0DL12 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC14.01□□□□□ -0.17
SMIM17P0DL12 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC14.01□□□□□ -0.17
SMIM17P0DL12 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC14.01□□□□□ -0.17
SMIM17P0DL12 KRT18P61-201ENST00000585825 1298 ntBASIC14.01□□□□□ -0.17
SMIM17P0DL12 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMIM17P0DL12 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SMIM17P0DL12 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMIM17P0DL12 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMIM17P0DL12 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
SMIM17P0DL12 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.01□□□□□ -0.17
SMIM17P0DL12 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.01□□□□□ -0.17
SMIM17P0DL12 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
SMIM17P0DL12 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMIM17P0DL12 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMIM17P0DL12 TEX21P-204ENST00000641479 1693 ntBASIC14.01□□□□□ -0.17
SMIM17P0DL12 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMIM17P0DL12 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
SMIM17P0DL12 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC14□□□□□ -0.17
SMIM17P0DL12 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
SMIM17P0DL12 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SMIM17P0DL12 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SMIM17P0DL12 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SMIM17P0DL12 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
SMIM17P0DL12 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SMIM17P0DL12 AC006333.2-201ENST00000607957 2099 ntBASIC14□□□□□ -0.17
SMIM17P0DL12 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
SMIM17P0DL12 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC14□□□□□ -0.17
SMIM17P0DL12 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC14□□□□□ -0.17
SMIM17P0DL12 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SMIM17P0DL12 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC14□□□□□ -0.17
SMIM17P0DL12 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC14□□□□□ -0.17
SMIM17P0DL12 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SMIM17P0DL12 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SMIM17P0DL12 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC14□□□□□ -0.17
SMIM17P0DL12 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC14□□□□□ -0.17
SMIM17P0DL12 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
SMIM17P0DL12 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SMIM17P0DL12 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SMIM17P0DL12 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
SMIM17P0DL12 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC14□□□□□ -0.17
SMIM17P0DL12 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC14□□□□□ -0.17
SMIM17P0DL12 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SMIM17P0DL12 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC14□□□□□ -0.17
SMIM17P0DL12 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC14□□□□□ -0.17
SMIM17P0DL12 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SMIM17P0DL12 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC14□□□□□ -0.17
SMIM17P0DL12 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14□□□□□ -0.17
SMIM17P0DL12 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SMIM17P0DL12 ZNF815P-204ENST00000434898 1737 ntBASIC14□□□□□ -0.17
SMIM17P0DL12 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC14□□□□□ -0.17
SMIM17P0DL12 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC14□□□□□ -0.17
SMIM17P0DL12 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SMIM17P0DL12 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC14□□□□□ -0.17
SMIM17P0DL12 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SMIM17P0DL12 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC14□□□□□ -0.17
SMIM17P0DL12 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
SMIM17P0DL12 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SMIM17P0DL12 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMIM17P0DL12 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMIM17P0DL12 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMIM17P0DL12 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC13.99□□□□□ -0.17
SMIM17P0DL12 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMIM17P0DL12 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
SMIM17P0DL12 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMIM17P0DL12 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
SMIM17P0DL12 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMIM17P0DL12 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC13.99□□□□□ -0.17
SMIM17P0DL12 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMIM17P0DL12 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
SMIM17P0DL12 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC13.99□□□□□ -0.17
SMIM17P0DL12 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMIM17P0DL12 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMIM17P0DL12 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMIM17P0DL12 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SMIM17P0DL12 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMIM17P0DL12 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SMIM17P0DL12 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMIM17P0DL12 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC13.99□□□□□ -0.17
SMIM17P0DL12 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC13.99□□□□□ -0.17
SMIM17P0DL12 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC13.99□□□□□ -0.17
SMIM17P0DL12 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SMIM17P0DL12 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms