Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
ALDH1A1P00352 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.47■■□□□ 1.03
ALDH1A1P00352 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
ALDH1A1P00352 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ALDH1A1P00352 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
ALDH1A1P00352 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ALDH1A1P00352 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ALDH1A1P00352 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
ALDH1A1P00352 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ALDH1A1P00352 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
ALDH1A1P00352 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.46■■□□□ 1.03
ALDH1A1P00352 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
ALDH1A1P00352 RCC2P3-201ENST00000418112 1537 ntBASIC21.46■■□□□ 1.03
ALDH1A1P00352 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ALDH1A1P00352 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ALDH1A1P00352 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.46■■□□□ 1.03
ALDH1A1P00352 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ALDH1A1P00352 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC21.46■■□□□ 1.03
ALDH1A1P00352 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC21.46■■□□□ 1.03
ALDH1A1P00352 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC21.46■■□□□ 1.03
ALDH1A1P00352 AC114341.1-201ENST00000618070 349 ntBASIC21.46■■□□□ 1.03
ALDH1A1P00352 FAM215A-202ENST00000632077 792 ntBASIC21.46■■□□□ 1.03
ALDH1A1P00352 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ALDH1A1P00352 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ALDH1A1P00352 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
ALDH1A1P00352 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ALDH1A1P00352 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ALDH1A1P00352 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ALDH1A1P00352 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ALDH1A1P00352 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
ALDH1A1P00352 AC008556.1-201ENST00000610908 2040 ntBASIC21.45■■□□□ 1.02
ALDH1A1P00352 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
ALDH1A1P00352 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
ALDH1A1P00352 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ALDH1A1P00352 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ALDH1A1P00352 ELP6-205ENST00000439305 880 ntTSL 2 BASIC21.45■■□□□ 1.02
ALDH1A1P00352 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
ALDH1A1P00352 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC21.45■■□□□ 1.02
ALDH1A1P00352 PGAM5P1-201ENST00000518923 814 ntBASIC21.45■■□□□ 1.02
ALDH1A1P00352 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ALDH1A1P00352 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC21.45■■□□□ 1.02
ALDH1A1P00352 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ALDH1A1P00352 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ALDH1A1P00352 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ALDH1A1P00352 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ALDH1A1P00352 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ALDH1A1P00352 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
ALDH1A1P00352 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC21.45■■□□□ 1.02
ALDH1A1P00352 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ALDH1A1P00352 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ALDH1A1P00352 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ALDH1A1P00352 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ALDH1A1P00352 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.44■■□□□ 1.02
ALDH1A1P00352 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ALDH1A1P00352 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.44■■□□□ 1.02
ALDH1A1P00352 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
ALDH1A1P00352 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ALDH1A1P00352 EP400NL-214ENST00000641289 2402 ntBASIC21.44■■□□□ 1.02
ALDH1A1P00352 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ALDH1A1P00352 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ALDH1A1P00352 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ALDH1A1P00352 MIR564-202ENST00000385049 94 ntBASIC21.44■■□□□ 1.02
ALDH1A1P00352 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.44■■□□□ 1.02
ALDH1A1P00352 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC21.44■■□□□ 1.02
ALDH1A1P00352 UPF3AP3-201ENST00000420996 769 ntBASIC21.44■■□□□ 1.02
ALDH1A1P00352 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
ALDH1A1P00352 AC098831.1-202ENST00000438821 336 ntBASIC21.44■■□□□ 1.02
ALDH1A1P00352 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC21.44■■□□□ 1.02
ALDH1A1P00352 AC132008.2-207ENST00000454517 770 ntBASIC21.44■■□□□ 1.02
ALDH1A1P00352 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC21.44■■□□□ 1.02
ALDH1A1P00352 AL049840.3-201ENST00000602669 611 ntBASIC21.44■■□□□ 1.02
ALDH1A1P00352 AC027601.4-201ENST00000611259 610 ntBASIC21.44■■□□□ 1.02
ALDH1A1P00352 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC21.44■■□□□ 1.02
ALDH1A1P00352 AC083906.6-201ENST00000641366 219 ntBASIC21.44■■□□□ 1.02
ALDH1A1P00352 AC079781.4-201ENST00000641908 219 ntBASIC21.44■■□□□ 1.02
ALDH1A1P00352 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
ALDH1A1P00352 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ALDH1A1P00352 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ALDH1A1P00352 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC21.44■■□□□ 1.02
ALDH1A1P00352 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ALDH1A1P00352 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ALDH1A1P00352 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ALDH1A1P00352 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
ALDH1A1P00352 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ALDH1A1P00352 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
ALDH1A1P00352 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
ALDH1A1P00352 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.43■■□□□ 1.02
ALDH1A1P00352 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
ALDH1A1P00352 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ALDH1A1P00352 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ALDH1A1P00352 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC21.43■■□□□ 1.02
ALDH1A1P00352 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC21.43■■□□□ 1.02
ALDH1A1P00352 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ALDH1A1P00352 AL355877.3-201ENST00000622820 899 ntBASIC21.43■■□□□ 1.02
ALDH1A1P00352 AC055717.3-201ENST00000622967 595 ntBASIC21.43■■□□□ 1.02
ALDH1A1P00352 AC116407.3-201ENST00000623905 1129 ntBASIC21.43■■□□□ 1.02
ALDH1A1P00352 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ALDH1A1P00352 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC21.43■■□□□ 1.02
ALDH1A1P00352 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
ALDH1A1P00352 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms