Protein–RNA interactions for Protein: L7N248

Gm6871, Predicted gene 6871, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm6871L7N248 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gm6871L7N248 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
Gm6871L7N248 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Gm6871L7N248 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm6871L7N248 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm6871L7N248 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm6871L7N248 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Gm6871L7N248 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.45□□□□□ -0.42
Gm6871L7N248 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Gm6871L7N248 Gm7889-201ENSMUST00000185591 958 ntBASIC12.45□□□□□ -0.42
Gm6871L7N248 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC12.45□□□□□ -0.42
Gm6871L7N248 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm6871L7N248 Gm15442-201ENSMUST00000117905 1527 ntBASIC12.45□□□□□ -0.42
Gm6871L7N248 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.45□□□□□ -0.42
Gm6871L7N248 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm6871L7N248 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Gm6871L7N248 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Gm6871L7N248 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm6871L7N248 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.45□□□□□ -0.42
Gm6871L7N248 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Gm6871L7N248 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm6871L7N248 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm6871L7N248 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm6871L7N248 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm6871L7N248 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm6871L7N248 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Gm6871L7N248 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Gm6871L7N248 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm6871L7N248 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm6871L7N248 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm6871L7N248 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Gm6871L7N248 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm6871L7N248 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Gm6871L7N248 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Gm6871L7N248 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC12.44□□□□□ -0.42
Gm6871L7N248 Gm43799-201ENSMUST00000201845 579 ntBASIC12.44□□□□□ -0.42
Gm6871L7N248 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm6871L7N248 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Gm6871L7N248 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Gm6871L7N248 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm6871L7N248 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Gm6871L7N248 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm6871L7N248 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm6871L7N248 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm6871L7N248 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Gm6871L7N248 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm6871L7N248 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Gm6871L7N248 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm6871L7N248 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm6871L7N248 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Gm6871L7N248 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.44□□□□□ -0.42
Gm6871L7N248 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Gm6871L7N248 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm6871L7N248 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC12.44□□□□□ -0.42
Gm6871L7N248 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Gm6871L7N248 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm6871L7N248 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Gm6871L7N248 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Gm6871L7N248 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm6871L7N248 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Gm6871L7N248 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm6871L7N248 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Gm6871L7N248 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm6871L7N248 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm6871L7N248 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm6871L7N248 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm6871L7N248 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm6871L7N248 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm6871L7N248 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm6871L7N248 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Gm6871L7N248 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC12.43□□□□□ -0.42
Gm6871L7N248 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm6871L7N248 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm6871L7N248 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm6871L7N248 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm6871L7N248 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm6871L7N248 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm6871L7N248 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC12.43□□□□□ -0.42
Gm6871L7N248 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm6871L7N248 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm6871L7N248 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm6871L7N248 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm6871L7N248 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC12.43□□□□□ -0.42
Gm6871L7N248 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.43□□□□□ -0.42
Gm6871L7N248 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.43□□□□□ -0.42
Gm6871L7N248 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm6871L7N248 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm6871L7N248 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm6871L7N248 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm6871L7N248 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm6871L7N248 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm6871L7N248 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm6871L7N248 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm6871L7N248 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.43□□□□□ -0.42
Gm6871L7N248 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm6871L7N248 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm6871L7N248 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm6871L7N248 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm6871L7N248 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm6871L7N248 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms