Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 VTRNA1-3-201ENST00000365645 89 ntBASIC1.14□□□□□ -2.23
HCN4Q9Y3Q4 RNU6-656P-201ENST00000516785 107 ntBASIC1.14□□□□□ -2.23
HCN4Q9Y3Q4 RNU6-1187P-201ENST00000364771 110 ntBASIC1.13□□□□□ -2.23
HCN4Q9Y3Q4 Y_RNA.375-201ENST00000365625 101 ntBASIC1.13□□□□□ -2.23
HCN4Q9Y3Q4 MIR936-201ENST00000401264 98 ntBASIC1.13□□□□□ -2.23
HCN4Q9Y3Q4 SCARNA17.3-201ENST00000516381 125 ntBASIC1.13□□□□□ -2.23
HCN4Q9Y3Q4 RNA5SP147-201ENST00000516493 109 ntBASIC1.13□□□□□ -2.23
HCN4Q9Y3Q4 MIR4714-201ENST00000580728 77 ntBASIC1.13□□□□□ -2.23
HCN4Q9Y3Q4 MIR608-201ENST00000384820 100 ntBASIC1.12□□□□□ -2.23
HCN4Q9Y3Q4 MIR652-201ENST00000385278 98 ntBASIC1.12□□□□□ -2.23
HCN4Q9Y3Q4 RNU6-542P-201ENST00000516405 103 ntBASIC1.12□□□□□ -2.23
HCN4Q9Y3Q4 MIR5706-201ENST00000579841 80 ntBASIC1.12□□□□□ -2.23
HCN4Q9Y3Q4 RNA5SP517-201ENST00000364724 117 ntBASIC1.11□□□□□ -2.23
HCN4Q9Y3Q4 RNU6-1162P-201ENST00000384443 104 ntBASIC1.11□□□□□ -2.23
HCN4Q9Y3Q4 MIR521-2-201ENST00000384818 87 ntBASIC1.11□□□□□ -2.23
HCN4Q9Y3Q4 MIR1285-1-201ENST00000408593 84 ntBASIC1.1□□□□□ -2.23
HCN4Q9Y3Q4 Y_RNA.633-201ENST00000459107 95 ntBASIC1.1□□□□□ -2.23
HCN4Q9Y3Q4 RNA5SP285-201ENST00000516619 119 ntBASIC1.1□□□□□ -2.23
HCN4Q9Y3Q4 RNA5SP215-201ENST00000363440 122 ntBASIC1.09□□□□□ -2.23
HCN4Q9Y3Q4 MIR140-201ENST00000385282 100 ntBASIC1.09□□□□□ -2.23
HCN4Q9Y3Q4 AC110620.1-201ENST00000416042 228 ntBASIC1.09□□□□□ -2.23
HCN4Q9Y3Q4 MIR548AE1-201ENST00000583292 70 ntBASIC1.09□□□□□ -2.23
HCN4Q9Y3Q4 SNORA70.25-201ENST00000612741 95 ntBASIC1.09□□□□□ -2.23
HCN4Q9Y3Q4 RNU6-669P-201ENST00000365575 107 ntBASIC1.08□□□□□ -2.24
HCN4Q9Y3Q4 SNORA36.2-201ENST00000384004 127 ntBASIC1.08□□□□□ -2.24
HCN4Q9Y3Q4 SNORA15B-2-201ENST00000384058 135 ntBASIC1.08□□□□□ -2.24
HCN4Q9Y3Q4 SNORA15B-1-201ENST00000384334 135 ntBASIC1.08□□□□□ -2.24
HCN4Q9Y3Q4 uc_338.10-201ENST00000621872 182 ntBASIC1.08□□□□□ -2.24
HCN4Q9Y3Q4 MIR9-2-201ENST00000384838 87 ntBASIC1.07□□□□□ -2.24
HCN4Q9Y3Q4 RNU6ATAC4P-201ENST00000387446 126 ntBASIC1.07□□□□□ -2.24
HCN4Q9Y3Q4 RNU1-29P-201ENST00000606574 126 ntBASIC1.07□□□□□ -2.24
HCN4Q9Y3Q4 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.07□□□□□ -2.24
HCN4Q9Y3Q4 SNORD118-201ENST00000363593 134 ntBASIC1.06□□□□□ -2.24
HCN4Q9Y3Q4 RNY1P8-201ENST00000383970 114 ntBASIC1.06□□□□□ -2.24
HCN4Q9Y3Q4 MIR532-201ENST00000385025 91 ntBASIC1.06□□□□□ -2.24
HCN4Q9Y3Q4 RNU6-1089P-201ENST00000516473 104 ntBASIC1.06□□□□□ -2.24
HCN4Q9Y3Q4 MIR4752-201ENST00000579672 72 ntBASIC1.06□□□□□ -2.24
HCN4Q9Y3Q4 MIR4473-201ENST00000583731 91 ntBASIC1.06□□□□□ -2.24
HCN4Q9Y3Q4 AC092634.7-201ENST00000621022 103 ntBASIC1.06□□□□□ -2.24
HCN4Q9Y3Q4 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
HCN4Q9Y3Q4 RNU6-110P-201ENST00000384508 104 ntBASIC1.05□□□□□ -2.24
HCN4Q9Y3Q4 AC069271.1-201ENST00000445577 156 ntBASIC1.05□□□□□ -2.24
HCN4Q9Y3Q4 MIR3973-201ENST00000579824 107 ntBASIC1.05□□□□□ -2.24
HCN4Q9Y3Q4 HMGN2P22-201ENST00000427588 175 ntBASIC1.04□□□□□ -2.24
HCN4Q9Y3Q4 AC021146.9-201ENST00000512503 156 ntBASIC1.04□□□□□ -2.24
HCN4Q9Y3Q4 SNORA63.6-201ENST00000364921 119 ntBASIC1.03□□□□□ -2.24
HCN4Q9Y3Q4 SNORA40.8-201ENST00000411034 126 ntBASIC1.03□□□□□ -2.24
HCN4Q9Y3Q4 snoU13.13-201ENST00000458842 104 ntBASIC1.03□□□□□ -2.24
HCN4Q9Y3Q4 ACA64.5-201ENST00000516207 127 ntBASIC1.02□□□□□ -2.25
HCN4Q9Y3Q4 Y_RNA.125-201ENST00000363371 111 ntBASIC1.01□□□□□ -2.25
HCN4Q9Y3Q4 MIR582-201ENST00000365731 98 ntBASIC1.01□□□□□ -2.25
HCN4Q9Y3Q4 MIR548E-201ENST00000408287 88 ntBASIC1.01□□□□□ -2.25
HCN4Q9Y3Q4 RNU6-848P-201ENST00000515948 107 ntBASIC1.01□□□□□ -2.25
HCN4Q9Y3Q4 RNU6-617P-201ENST00000516147 107 ntBASIC1.01□□□□□ -2.25
HCN4Q9Y3Q4 RNU6-473P-201ENST00000516164 107 ntBASIC1.01□□□□□ -2.25
HCN4Q9Y3Q4 RNU6-1049P-201ENST00000516414 107 ntBASIC1.01□□□□□ -2.25
HCN4Q9Y3Q4 SNORA25.18-201ENST00000607153 114 ntBASIC1.01□□□□□ -2.25
HCN4Q9Y3Q4 AL157398.1-201ENST00000452981 186 ntBASIC1□□□□□ -2.25
HCN4Q9Y3Q4 snoU13.19-201ENST00000459148 104 ntBASIC1□□□□□ -2.25
HCN4Q9Y3Q4 SNORD114-21-201ENST00000606412 72 ntBASIC1□□□□□ -2.25
HCN4Q9Y3Q4 U7.6-201ENST00000610841 64 ntBASIC1□□□□□ -2.25
HCN4Q9Y3Q4 RNU4-38P-201ENST00000364472 129 ntBASIC0.99□□□□□ -2.25
HCN4Q9Y3Q4 RNA5SP299-201ENST00000391203 116 ntBASIC0.99□□□□□ -2.25
HCN4Q9Y3Q4 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
HCN4Q9Y3Q4 RNU6-499P-201ENST00000365615 107 ntBASIC0.98□□□□□ -2.25
HCN4Q9Y3Q4 SNORA2A-201ENST00000383885 135 ntBASIC0.98□□□□□ -2.25
HCN4Q9Y3Q4 AC244090.1-201ENST00000441884 93 ntBASIC0.98□□□□□ -2.25
HCN4Q9Y3Q4 AC103810.9-201ENST00000606688 112 ntBASIC0.98□□□□□ -2.25
HCN4Q9Y3Q4 MIR20A-201ENST00000362279 71 ntBASIC0.97□□□□□ -2.25
HCN4Q9Y3Q4 RNU6-30P-201ENST00000384561 107 ntBASIC0.97□□□□□ -2.25
HCN4Q9Y3Q4 MIR518A1-201ENST00000385068 85 ntBASIC0.97□□□□□ -2.25
HCN4Q9Y3Q4 SCARNA21.1-201ENST00000515996 128 ntBASIC0.97□□□□□ -2.25
HCN4Q9Y3Q4 MIR4698-201ENST00000577795 80 ntBASIC0.97□□□□□ -2.25
HCN4Q9Y3Q4 MIR4711-201ENST00000578274 70 ntBASIC0.97□□□□□ -2.25
HCN4Q9Y3Q4 MIR2909-201ENST00000617113 69 ntBASIC0.97□□□□□ -2.25
HCN4Q9Y3Q4 SNORA25.5-201ENST00000363782 126 ntBASIC0.96□□□□□ -2.26
HCN4Q9Y3Q4 SNORA33.1-201ENST00000364957 130 ntBASIC0.96□□□□□ -2.26
HCN4Q9Y3Q4 RNA5SP331-201ENST00000364986 107 ntBASIC0.96□□□□□ -2.26
HCN4Q9Y3Q4 RNU6-302P-201ENST00000365249 107 ntBASIC0.96□□□□□ -2.26
HCN4Q9Y3Q4 SNORD71-201ENST00000411292 86 ntBASIC0.96□□□□□ -2.26
HCN4Q9Y3Q4 MIR4636-201ENST00000582271 80 ntBASIC0.96□□□□□ -2.26
HCN4Q9Y3Q4 MIR4653-201ENST00000585107 83 ntBASIC0.96□□□□□ -2.26
HCN4Q9Y3Q4 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
HCN4Q9Y3Q4 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.94□□□□□ -2.26
HCN4Q9Y3Q4 RPL39P28-201ENST00000465655 155 ntBASIC0.94□□□□□ -2.26
HCN4Q9Y3Q4 RNU6-229P-201ENST00000516614 102 ntBASIC0.94□□□□□ -2.26
HCN4Q9Y3Q4 U2.7-201ENST00000619197 100 ntBASIC0.94□□□□□ -2.26
HCN4Q9Y3Q4 RNA5SP347-201ENST00000362445 119 ntBASIC0.93□□□□□ -2.26
HCN4Q9Y3Q4 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
HCN4Q9Y3Q4 RNA5SP193-201ENST00000410353 107 ntBASIC0.93□□□□□ -2.26
HCN4Q9Y3Q4 SNORD2-201ENST00000459163 69 ntBASIC0.93□□□□□ -2.26
HCN4Q9Y3Q4 PSMC1P5-201ENST00000512850 177 ntBASIC0.92□□□□□ -2.26
HCN4Q9Y3Q4 SNORA62.5-201ENST00000516634 120 ntBASIC0.92□□□□□ -2.26
HCN4Q9Y3Q4 MIR517B-201ENST00000385102 67 ntBASIC0.91□□□□□ -2.26
HCN4Q9Y3Q4 MIR516B1-201ENST00000385211 90 ntBASIC0.91□□□□□ -2.26
HCN4Q9Y3Q4 RNU7-174P-201ENST00000516248 59 ntBASIC0.91□□□□□ -2.26
HCN4Q9Y3Q4 RNU4-54P-201ENST00000516428 129 ntBASIC0.91□□□□□ -2.26
HCN4Q9Y3Q4 AC243829.3-201ENST00000622177 108 ntBASIC0.91□□□□□ -2.26
HCN4Q9Y3Q4 RNU6-940P-201ENST00000363433 104 ntBASIC0.9□□□□□ -2.27
HCN4Q9Y3Q4 SNORD114-29-201ENST00000364819 70 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 251.9 ms