Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 Y_RNA.435-201ENST00000384095 112 ntBASIC-5.49□□□□□ -3.29
VPS13AQ96RL7 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-5.49□□□□□ -3.29
VPS13AQ96RL7 RNU6-402P-201ENST00000410678 103 ntBASIC-5.49□□□□□ -3.29
VPS13AQ96RL7 Y_RNA.682-201ENST00000516457 100 ntBASIC-5.49□□□□□ -3.29
VPS13AQ96RL7 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-5.49□□□□□ -3.29
VPS13AQ96RL7 SNORD113-1-201ENST00000365321 69 ntBASIC-5.5□□□□□ -3.29
VPS13AQ96RL7 SCARNA23-201ENST00000516060 130 ntBASIC-5.51□□□□□ -3.29
VPS13AQ96RL7 RNU6-189P-201ENST00000516120 101 ntBASIC-5.51□□□□□ -3.29
VPS13AQ96RL7 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-5.51□□□□□ -3.29
VPS13AQ96RL7 SNORD116-10-201ENST00000363791 102 ntBASIC-5.52□□□□□ -3.29
VPS13AQ96RL7 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-5.52□□□□□ -3.29
VPS13AQ96RL7 MTND1P19-201ENST00000511780 315 ntBASIC-5.52□□□□□ -3.29
VPS13AQ96RL7 Y_RNA.813-201ENST00000364639 102 ntBASIC-5.53□□□□□ -3.29
VPS13AQ96RL7 MTND2P39-201ENST00000457230 764 ntBASIC-5.53□□□□□ -3.29
VPS13AQ96RL7 AC103810.7-201ENST00000607821 91 ntBASIC-5.53□□□□□ -3.29
VPS13AQ96RL7 RNU6-1059P-201ENST00000363752 98 ntBASIC-5.53□□□□□ -3.3
VPS13AQ96RL7 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-5.53□□□□□ -3.3
VPS13AQ96RL7 MTND4P28-201ENST00000426217 387 ntBASIC-5.53□□□□□ -3.3
VPS13AQ96RL7 RNU6-818P-201ENST00000364837 108 ntBASIC-5.54□□□□□ -3.3
VPS13AQ96RL7 SNORD63-201ENST00000384262 68 ntBASIC-5.55□□□□□ -3.3
VPS13AQ96RL7 SNORA69.1-201ENST00000390904 137 ntBASIC-5.55□□□□□ -3.3
VPS13AQ96RL7 Y_RNA.590-201ENST00000410140 107 ntBASIC-5.55□□□□□ -3.3
VPS13AQ96RL7 MTND1P29-201ENST00000448112 647 ntBASIC-5.55□□□□□ -3.3
VPS13AQ96RL7 Y_RNA.198-201ENST00000364013 98 ntBASIC-5.55□□□□□ -3.3
VPS13AQ96RL7 SCARNA15.1-201ENST00000516384 125 ntBASIC-5.55□□□□□ -3.3
VPS13AQ96RL7 Y_RNA.722-201ENST00000517279 114 ntBASIC-5.55□□□□□ -3.3
VPS13AQ96RL7 RNU6-813P-201ENST00000384691 107 ntBASIC-5.56□□□□□ -3.3
VPS13AQ96RL7 RNU6-1220P-201ENST00000517126 108 ntBASIC-5.56□□□□□ -3.3
VPS13AQ96RL7 MIR1264-201ENST00000616374 69 ntBASIC-5.56□□□□□ -3.3
VPS13AQ96RL7 RNU6-624P-201ENST00000363411 107 ntBASIC-5.57□□□□□ -3.3
VPS13AQ96RL7 MIR4694-201ENST00000578534 80 ntBASIC-5.57□□□□□ -3.3
VPS13AQ96RL7 RNU6-1119P-201ENST00000384349 108 ntBASIC-5.58□□□□□ -3.3
VPS13AQ96RL7 MIR548X-201ENST00000580069 75 ntBASIC-5.58□□□□□ -3.3
VPS13AQ96RL7 RNU6-876P-201ENST00000391295 104 ntBASIC-5.59□□□□□ -3.3
VPS13AQ96RL7 RNU6-1156P-201ENST00000410365 100 ntBASIC-5.59□□□□□ -3.3
VPS13AQ96RL7 MTND1P1-201ENST00000445453 368 ntBASIC-5.59□□□□□ -3.3
VPS13AQ96RL7 RNU6-986P-201ENST00000363133 102 ntBASIC-5.59□□□□□ -3.3
VPS13AQ96RL7 Y_RNA.213-201ENST00000364178 111 ntBASIC-5.59□□□□□ -3.3
VPS13AQ96RL7 Y_RNA.418-201ENST00000384029 102 ntBASIC-5.6□□□□□ -3.31
VPS13AQ96RL7 RNU6-937P-201ENST00000384325 106 ntBASIC-5.6□□□□□ -3.31
VPS13AQ96RL7 RNU6-972P-201ENST00000391208 107 ntBASIC-5.6□□□□□ -3.31
VPS13AQ96RL7 RNU6-911P-201ENST00000516523 104 ntBASIC-5.6□□□□□ -3.31
VPS13AQ96RL7 SNORD45A-201ENST00000384512 84 ntBASIC-5.6□□□□□ -3.31
VPS13AQ96RL7 SNORA63.4-201ENST00000362763 126 ntBASIC-5.61□□□□□ -3.31
VPS13AQ96RL7 Y_RNA.194-201ENST00000363985 102 ntBASIC-5.61□□□□□ -3.31
VPS13AQ96RL7 RNU6-411P-201ENST00000384451 107 ntBASIC-5.61□□□□□ -3.31
VPS13AQ96RL7 MIR548AL-201ENST00000578416 97 ntBASIC-5.62□□□□□ -3.31
VPS13AQ96RL7 RNU6-940P-201ENST00000363433 104 ntBASIC-5.62□□□□□ -3.31
VPS13AQ96RL7 MTND4LP14-201ENST00000429447 288 ntBASIC-5.62□□□□□ -3.31
VPS13AQ96RL7 MTND4P24-201ENST00000424002 397 ntBASIC-5.63□□□□□ -3.31
VPS13AQ96RL7 SNORA25.5-201ENST00000363782 126 ntBASIC-5.63□□□□□ -3.31
VPS13AQ96RL7 AC005899.2-201ENST00000584353 90 ntBASIC-5.63□□□□□ -3.31
VPS13AQ96RL7 SNORD18B-201ENST00000365659 72 ntBASIC-5.63□□□□□ -3.31
VPS13AQ96RL7 RNU6-95P-201ENST00000384697 107 ntBASIC-5.64□□□□□ -3.31
VPS13AQ96RL7 AC074348.1-201ENST00000426503 132 ntBASIC-5.64□□□□□ -3.31
VPS13AQ96RL7 SNORD116-1-201ENST00000384335 95 ntBASIC-5.64□□□□□ -3.31
VPS13AQ96RL7 Y_RNA.609-201ENST00000410669 89 ntBASIC-5.64□□□□□ -3.31
VPS13AQ96RL7 MIR616-201ENST00000385293 97 ntBASIC-5.65□□□□□ -3.31
VPS13AQ96RL7 AC016550.1-201ENST00000505348 785 ntBASIC-5.65□□□□□ -3.31
VPS13AQ96RL7 RNU6-1204P-201ENST00000363948 107 ntBASIC-5.65□□□□□ -3.31
VPS13AQ96RL7 MTND4P7-201ENST00000523876 130 ntBASIC-5.65□□□□□ -3.31
VPS13AQ96RL7 MIR1297-201ENST00000637311 77 ntBASIC-5.66□□□□□ -3.32
VPS13AQ96RL7 RNU6-1272P-201ENST00000362776 107 ntBASIC-5.67□□□□□ -3.32
VPS13AQ96RL7 MIR3613-201ENST00000579844 87 ntBASIC-5.67□□□□□ -3.32
VPS13AQ96RL7 MIR548D2-201ENST00000384955 97 ntBASIC-5.67□□□□□ -3.32
VPS13AQ96RL7 RNU6-1015P-201ENST00000517121 99 ntBASIC-5.67□□□□□ -3.32
VPS13AQ96RL7 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-5.67□□□□□ -3.32
VPS13AQ96RL7 Y_RNA.608-201ENST00000410647 95 ntBASIC-5.67□□□□□ -3.32
VPS13AQ96RL7 Y_RNA.651-201ENST00000459380 103 ntBASIC-5.68□□□□□ -3.32
VPS13AQ96RL7 RNU7-180P-201ENST00000459240 63 ntBASIC-5.69□□□□□ -3.32
VPS13AQ96RL7 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-5.69□□□□□ -3.32
VPS13AQ96RL7 RNU6-557P-201ENST00000516842 110 ntBASIC-5.69□□□□□ -3.32
VPS13AQ96RL7 RNU6-508P-201ENST00000363231 103 ntBASIC-5.7□□□□□ -3.32
VPS13AQ96RL7 RNU6-533P-201ENST00000384144 107 ntBASIC-5.7□□□□□ -3.32
VPS13AQ96RL7 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-5.7□□□□□ -3.32
VPS13AQ96RL7 Y_RNA.309-201ENST00000365046 111 ntBASIC-5.71□□□□□ -3.32
VPS13AQ96RL7 Y_RNA.563-201ENST00000384707 108 ntBASIC-5.71□□□□□ -3.32
VPS13AQ96RL7 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC-5.71□□□□□ -3.32
VPS13AQ96RL7 MIR2053-201ENST00000459295 91 ntBASIC-5.71□□□□□ -3.32
VPS13AQ96RL7 SNORD2.1-201ENST00000458762 69 ntBASIC-5.71□□□□□ -3.32
VPS13AQ96RL7 SNORD58.1-201ENST00000391313 66 ntBASIC-5.71□□□□□ -3.32
VPS13AQ96RL7 AL121914.1-201ENST00000450188 156 ntBASIC-5.71□□□□□ -3.32
VPS13AQ96RL7 SNORD115-48-201ENST00000364764 76 ntBASIC-5.72□□□□□ -3.32
VPS13AQ96RL7 RNU6-808P-201ENST00000391233 108 ntBASIC-5.72□□□□□ -3.32
VPS13AQ96RL7 Vault.3-201ENST00000516676 95 ntBASIC-5.72□□□□□ -3.33
VPS13AQ96RL7 SNORD113-5-201ENST00000607261 78 ntBASIC-5.72□□□□□ -3.33
VPS13AQ96RL7 Z69908.1-201ENST00000622603 247 ntBASIC-5.72□□□□□ -3.33
VPS13AQ96RL7 Y_RNA.378-201ENST00000365652 113 ntBASIC-5.73□□□□□ -3.33
VPS13AQ96RL7 snoU18.1-201ENST00000629629 71 ntBASIC-5.74□□□□□ -3.33
VPS13AQ96RL7 AL603755.1-201ENST00000619504 163 ntBASIC-5.74□□□□□ -3.33
VPS13AQ96RL7 MIR519C-201ENST00000385053 87 ntBASIC-5.75□□□□□ -3.33
VPS13AQ96RL7 CCDC34P1-201ENST00000507441 517 ntBASIC-5.76□□□□□ -3.33
VPS13AQ96RL7 RNU6-1325P-201ENST00000364905 105 ntBASIC-5.77□□□□□ -3.33
VPS13AQ96RL7 MIR4744-201ENST00000581563 82 ntBASIC-5.77□□□□□ -3.33
VPS13AQ96RL7 RNU6-686P-201ENST00000364839 107 ntBASIC-5.77□□□□□ -3.33
VPS13AQ96RL7 snoU2_19.4-201ENST00000364329 80 ntBASIC-5.78□□□□□ -3.33
VPS13AQ96RL7 AL021368.1-201ENST00000607490 540 ntBASIC-5.78□□□□□ -3.33
VPS13AQ96RL7 RNU6-760P-201ENST00000516078 97 ntBASIC-5.79□□□□□ -3.34
VPS13AQ96RL7 RNU6-842P-201ENST00000384269 107 ntBASIC-5.79□□□□□ -3.34
VPS13AQ96RL7 MIR154-201ENST00000385243 84 ntBASIC-5.79□□□□□ -3.34
Retrieved 100 of 98,524 protein–RNA pairs in 218.2 ms