Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
HPS1Q92902 SNORA17.3-201ENST00000391159 129 ntBASIC1.43□□□□□ -2.18
HPS1Q92902 RNU7-160P-201ENST00000516660 62 ntBASIC1.43□□□□□ -2.18
HPS1Q92902 MIR5706-201ENST00000579841 80 ntBASIC1.43□□□□□ -2.18
HPS1Q92902 RNU6-458P-201ENST00000384179 107 ntBASIC1.42□□□□□ -2.18
HPS1Q92902 RNU6-1250P-201ENST00000391218 107 ntBASIC1.42□□□□□ -2.18
HPS1Q92902 SNORD124-201ENST00000459577 104 ntBASIC1.42□□□□□ -2.18
HPS1Q92902 RNA5SP94-201ENST00000516917 108 ntBASIC1.42□□□□□ -2.18
HPS1Q92902 MIR8081-201ENST00000611533 95 ntBASIC1.42□□□□□ -2.18
HPS1Q92902 MIR6773-201ENST00000612812 74 ntBASIC1.42□□□□□ -2.18
HPS1Q92902 U6.58-201ENST00000613107 107 ntBASIC1.42□□□□□ -2.18
HPS1Q92902 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.42□□□□□ -2.18
HPS1Q92902 RNU6-924P-201ENST00000362926 108 ntBASIC1.41□□□□□ -2.18
HPS1Q92902 MIR320A-201ENST00000385302 82 ntBASIC1.41□□□□□ -2.18
HPS1Q92902 SNORD53B-201ENST00000577887 78 ntBASIC1.4□□□□□ -2.19
HPS1Q92902 RNU1-42P-201ENST00000364033 160 ntBASIC1.39□□□□□ -2.19
HPS1Q92902 RNU6-1206P-201ENST00000516339 103 ntBASIC1.39□□□□□ -2.19
HPS1Q92902 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
HPS1Q92902 SNORD114-29-201ENST00000364819 70 ntBASIC1.38□□□□□ -2.19
HPS1Q92902 RNU4-62P-201ENST00000410125 130 ntBASIC1.38□□□□□ -2.19
HPS1Q92902 AP1B1P2-201ENST00000416196 106 ntBASIC1.38□□□□□ -2.19
HPS1Q92902 RNA5SP255-201ENST00000516370 107 ntBASIC1.38□□□□□ -2.19
HPS1Q92902 AC011195.1-201ENST00000578177 177 ntBASIC1.38□□□□□ -2.19
HPS1Q92902 MIR4752-201ENST00000579672 72 ntBASIC1.38□□□□□ -2.19
HPS1Q92902 RNU1-29P-201ENST00000606574 126 ntBASIC1.38□□□□□ -2.19
HPS1Q92902 BX248123.2-201ENST00000606318 124 ntBASIC1.37□□□□□ -2.19
HPS1Q92902 Y_RNA.164-201ENST00000363709 102 ntBASIC1.36□□□□□ -2.19
HPS1Q92902 SNORD114-24-201ENST00000365029 72 ntBASIC1.36□□□□□ -2.19
HPS1Q92902 SNORA49-201ENST00000386157 136 ntBASIC1.36□□□□□ -2.19
HPS1Q92902 SNORD99-201ENST00000408612 74 ntBASIC1.36□□□□□ -2.19
HPS1Q92902 RNA5SP247-201ENST00000411181 105 ntBASIC1.36□□□□□ -2.19
HPS1Q92902 MIR548AL-201ENST00000578416 97 ntBASIC1.36□□□□□ -2.19
HPS1Q92902 Y_RNA.69-201ENST00000362885 109 ntBASIC1.35□□□□□ -2.19
HPS1Q92902 MIRLET7B-201ENST00000385140 83 ntBASIC1.35□□□□□ -2.19
HPS1Q92902 RNU6-321P-201ENST00000410912 106 ntBASIC1.35□□□□□ -2.19
HPS1Q92902 RNA5SP61-201ENST00000516453 100 ntBASIC1.35□□□□□ -2.19
HPS1Q92902 MIR4303-201ENST00000581299 66 ntBASIC1.35□□□□□ -2.19
HPS1Q92902 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC1.35□□□□□ -2.19
HPS1Q92902 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
HPS1Q92902 RNU6-598P-201ENST00000364017 105 ntBASIC1.34□□□□□ -2.19
HPS1Q92902 RNY1P8-201ENST00000383970 114 ntBASIC1.34□□□□□ -2.19
HPS1Q92902 RNU6-696P-201ENST00000390834 107 ntBASIC1.34□□□□□ -2.19
HPS1Q92902 SNORA67.6-201ENST00000391093 99 ntBASIC1.34□□□□□ -2.19
HPS1Q92902 AL354695.1-201ENST00000427935 228 ntBASIC1.34□□□□□ -2.19
HPS1Q92902 RPS29P23-201ENST00000458635 123 ntBASIC1.34□□□□□ -2.19
HPS1Q92902 RNU7-151P-201ENST00000516930 53 ntBASIC1.34□□□□□ -2.19
HPS1Q92902 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
HPS1Q92902 MIR579-201ENST00000385221 98 ntBASIC1.33□□□□□ -2.2
HPS1Q92902 MIR618-201ENST00000385287 98 ntBASIC1.33□□□□□ -2.2
HPS1Q92902 TRMT112P2-201ENST00000512910 132 ntBASIC1.33□□□□□ -2.2
HPS1Q92902 MIR150-201ENST00000385048 84 ntBASIC1.32□□□□□ -2.2
HPS1Q92902 RNU7-95P-201ENST00000459222 64 ntBASIC1.32□□□□□ -2.2
HPS1Q92902 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.32□□□□□ -2.2
HPS1Q92902 RNU6-502P-201ENST00000362419 108 ntBASIC1.31□□□□□ -2.2
HPS1Q92902 RNU6-986P-201ENST00000363133 102 ntBASIC1.31□□□□□ -2.2
HPS1Q92902 RNU1-124P-201ENST00000363861 145 ntBASIC1.31□□□□□ -2.2
HPS1Q92902 MIR1304-201ENST00000408243 91 ntBASIC1.31□□□□□ -2.2
HPS1Q92902 RNU6ATAC14P-201ENST00000516218 91 ntBASIC1.31□□□□□ -2.2
HPS1Q92902 SNORA31.24-201ENST00000517232 57 ntBASIC1.31□□□□□ -2.2
HPS1Q92902 MIR26B-201ENST00000362251 77 ntBASIC1.3□□□□□ -2.2
HPS1Q92902 SNORD26-201ENST00000384147 75 ntBASIC1.3□□□□□ -2.2
HPS1Q92902 RNU6-724P-201ENST00000390958 105 ntBASIC1.3□□□□□ -2.2
HPS1Q92902 RNU7-188P-201ENST00000517063 64 ntBASIC1.3□□□□□ -2.2
HPS1Q92902 U7.6-201ENST00000610841 64 ntBASIC1.3□□□□□ -2.2
HPS1Q92902 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.3□□□□□ -2.2
HPS1Q92902 U2.18-201ENST00000622185 84 ntBASIC1.3□□□□□ -2.2
HPS1Q92902 Y_RNA.226-201ENST00000364337 114 ntBASIC1.29□□□□□ -2.2
HPS1Q92902 MIR329-2-201ENST00000385029 84 ntBASIC1.29□□□□□ -2.2
HPS1Q92902 RNU6-175P-201ENST00000516896 107 ntBASIC1.29□□□□□ -2.2
HPS1Q92902 RNU6-828P-201ENST00000364876 107 ntBASIC1.28□□□□□ -2.2
HPS1Q92902 AL451105.1-201ENST00000450005 189 ntBASIC1.28□□□□□ -2.2
HPS1Q92902 RNU6-782P-201ENST00000516852 104 ntBASIC1.28□□□□□ -2.2
HPS1Q92902 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.28□□□□□ -2.21
HPS1Q92902 MIR125B1-201ENST00000385236 88 ntBASIC1.27□□□□□ -2.21
HPS1Q92902 AC069271.1-201ENST00000445577 156 ntBASIC1.27□□□□□ -2.21
HPS1Q92902 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.27□□□□□ -2.21
HPS1Q92902 RNA5SP404-201ENST00000517118 132 ntBASIC1.27□□□□□ -2.21
HPS1Q92902 RNU6-392P-201ENST00000364926 101 ntBASIC1.26□□□□□ -2.21
HPS1Q92902 MIR548AA1-201ENST00000384971 97 ntBASIC1.26□□□□□ -2.21
HPS1Q92902 MIR1287-201ENST00000408492 90 ntBASIC1.26□□□□□ -2.21
HPS1Q92902 Y_RNA.327-201ENST00000365201 102 ntBASIC1.25□□□□□ -2.21
HPS1Q92902 RNU6-995P-201ENST00000391244 107 ntBASIC1.25□□□□□ -2.21
HPS1Q92902 RNA5SP222-201ENST00000411039 105 ntBASIC1.25□□□□□ -2.21
HPS1Q92902 MIR4421-201ENST00000578133 69 ntBASIC1.25□□□□□ -2.21
HPS1Q92902 RNA5SP517-201ENST00000364724 117 ntBASIC1.24□□□□□ -2.21
HPS1Q92902 SNORA2A-201ENST00000383885 135 ntBASIC1.24□□□□□ -2.21
HPS1Q92902 MIR499A-201ENST00000384903 122 ntBASIC1.24□□□□□ -2.21
HPS1Q92902 RNU6-1262P-201ENST00000516217 96 ntBASIC1.24□□□□□ -2.21
HPS1Q92902 AL353803.5-201ENST00000599815 141 ntBASIC1.24□□□□□ -2.21
HPS1Q92902 RNU6-1204P-201ENST00000363948 107 ntBASIC1.23□□□□□ -2.21
HPS1Q92902 MIR1323-201ENST00000408090 73 ntBASIC1.23□□□□□ -2.21
HPS1Q92902 MIR8070-201ENST00000616510 88 ntBASIC1.23□□□□□ -2.21
HPS1Q92902 RNU6-1036P-201ENST00000383959 104 ntBASIC1.22□□□□□ -2.21
HPS1Q92902 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.22□□□□□ -2.21
HPS1Q92902 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.22□□□□□ -2.21
HPS1Q92902 RNU6-229P-201ENST00000516614 102 ntBASIC1.21□□□□□ -2.22
HPS1Q92902 AC068338.1-201ENST00000565567 176 ntBASIC1.21□□□□□ -2.22
HPS1Q92902 MIR4677-201ENST00000584153 80 ntBASIC1.21□□□□□ -2.22
HPS1Q92902 AL353765.1-201ENST00000605514 183 ntBASIC1.21□□□□□ -2.22
HPS1Q92902 SNORD115-23-201ENST00000364461 82 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 173.2 ms