Protein–RNA interactions for Protein: Q92890

UFD1, Ubiquitin recognition factor in ER-associated degradation protein 1, humanhuman

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1Q92890 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.24□□□□□ -2.61
UFD1Q92890 MIR548I1-201ENST00000408810 149 ntBASIC-1.24□□□□□ -2.61
UFD1Q92890 RNU6-1212P-201ENST00000517023 104 ntBASIC-1.24□□□□□ -2.61
UFD1Q92890 RNU6-208P-201ENST00000362431 107 ntBASIC-1.25□□□□□ -2.61
UFD1Q92890 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.25□□□□□ -2.61
UFD1Q92890 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.25□□□□□ -2.61
UFD1Q92890 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.25□□□□□ -2.61
UFD1Q92890 RNU6-346P-201ENST00000516288 111 ntBASIC-1.25□□□□□ -2.61
UFD1Q92890 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.25□□□□□ -2.61
UFD1Q92890 RNU5F-1-201ENST00000362507 117 ntBASIC-1.26□□□□□ -2.61
UFD1Q92890 RNU6-431P-201ENST00000383874 107 ntBASIC-1.26□□□□□ -2.61
UFD1Q92890 RNY1P5-201ENST00000383890 115 ntBASIC-1.26□□□□□ -2.61
UFD1Q92890 RNU6-260P-201ENST00000384092 107 ntBASIC-1.26□□□□□ -2.61
UFD1Q92890 MIR124-2-201ENST00000385081 109 ntBASIC-1.26□□□□□ -2.61
UFD1Q92890 SNORD64-201ENST00000386683 67 ntBASIC-1.26□□□□□ -2.61
UFD1Q92890 snoU13.17-201ENST00000458802 104 ntBASIC-1.26□□□□□ -2.61
UFD1Q92890 SCARNA18B-201ENST00000458806 135 ntBASIC-1.26□□□□□ -2.61
UFD1Q92890 AC090617.8-201ENST00000623339 167 ntBASIC-1.26□□□□□ -2.61
UFD1Q92890 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.27□□□□□ -2.61
UFD1Q92890 SNORD58A-201ENST00000383875 65 ntBASIC-1.27□□□□□ -2.61
UFD1Q92890 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.27□□□□□ -2.61
UFD1Q92890 Y_RNA.506-201ENST00000384494 102 ntBASIC-1.27□□□□□ -2.61
UFD1Q92890 RNU6-972P-201ENST00000391208 107 ntBASIC-1.27□□□□□ -2.61
UFD1Q92890 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.27□□□□□ -2.61
UFD1Q92890 RNU6-659P-201ENST00000516454 104 ntBASIC-1.27□□□□□ -2.61
UFD1Q92890 MIR4773-1-201ENST00000637203 78 ntBASIC-1.27□□□□□ -2.61
UFD1Q92890 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.28□□□□□ -2.61
UFD1Q92890 SCARNA23-201ENST00000516060 130 ntBASIC-1.28□□□□□ -2.61
UFD1Q92890 AL353803.5-201ENST00000599815 141 ntBASIC-1.28□□□□□ -2.61
UFD1Q92890 RNU6-824P-201ENST00000363724 104 ntBASIC-1.29□□□□□ -2.62
UFD1Q92890 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.29□□□□□ -2.62
UFD1Q92890 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.29□□□□□ -2.62
UFD1Q92890 MIR147A-201ENST00000385079 72 ntBASIC-1.29□□□□□ -2.62
UFD1Q92890 RNU6-887P-201ENST00000410660 100 ntBASIC-1.29□□□□□ -2.62
UFD1Q92890 MIR382-201ENST00000637119 76 ntBASIC-1.29□□□□□ -2.62
UFD1Q92890 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.29□□□□□ -2.62
UFD1Q92890 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.3□□□□□ -2.62
UFD1Q92890 RNA5SP180-201ENST00000516181 101 ntBASIC-1.3□□□□□ -2.62
UFD1Q92890 RNU6-412P-201ENST00000516434 106 ntBASIC-1.3□□□□□ -2.62
UFD1Q92890 RNA5SP147-201ENST00000516493 109 ntBASIC-1.3□□□□□ -2.62
UFD1Q92890 RNU6-255P-201ENST00000516957 105 ntBASIC-1.3□□□□□ -2.62
UFD1Q92890 MIR6509-201ENST00000614603 85 ntBASIC-1.3□□□□□ -2.62
UFD1Q92890 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.31□□□□□ -2.62
UFD1Q92890 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.31□□□□□ -2.62
UFD1Q92890 RNU6-880P-201ENST00000384526 107 ntBASIC-1.31□□□□□ -2.62
UFD1Q92890 RNU6-904P-201ENST00000516206 101 ntBASIC-1.31□□□□□ -2.62
UFD1Q92890 AC026421.1-201ENST00000519101 163 ntBASIC-1.31□□□□□ -2.62
UFD1Q92890 MIR4464-201ENST00000580818 92 ntBASIC-1.31□□□□□ -2.62
UFD1Q92890 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.31□□□□□ -2.62
UFD1Q92890 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.32□□□□□ -2.62
UFD1Q92890 SNORA2.1-201ENST00000363089 137 ntBASIC-1.32□□□□□ -2.62
UFD1Q92890 SNORD114-17-201ENST00000364699 75 ntBASIC-1.32□□□□□ -2.62
UFD1Q92890 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.32□□□□□ -2.62
UFD1Q92890 MIR203A-201ENST00000384836 110 ntBASIC-1.32□□□□□ -2.62
UFD1Q92890 SNORA19.1-201ENST00000410656 129 ntBASIC-1.32□□□□□ -2.62
UFD1Q92890 SNX3P1X-201ENST00000414887 175 ntBASIC-1.32□□□□□ -2.62
UFD1Q92890 RNU6-706P-201ENST00000517229 104 ntBASIC-1.32□□□□□ -2.62
UFD1Q92890 MIR3657-201ENST00000584818 117 ntBASIC-1.32□□□□□ -2.62
UFD1Q92890 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.33□□□□□ -2.62
UFD1Q92890 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.33□□□□□ -2.62
UFD1Q92890 SNORA33.1-201ENST00000364957 130 ntBASIC-1.33□□□□□ -2.62
UFD1Q92890 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.33□□□□□ -2.62
UFD1Q92890 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.33□□□□□ -2.62
UFD1Q92890 SNORD116-10-201ENST00000363791 102 ntBASIC-1.34□□□□□ -2.62
UFD1Q92890 RNA5SP331-201ENST00000364986 107 ntBASIC-1.34□□□□□ -2.62
UFD1Q92890 AL691482.2-201ENST00000457453 84 ntBASIC-1.34□□□□□ -2.62
UFD1Q92890 AL445584.3-201ENST00000617173 78 ntBASIC-1.34□□□□□ -2.62
UFD1Q92890 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.35□□□□□ -2.63
UFD1Q92890 SNORD116-21-201ENST00000384507 92 ntBASIC-1.35□□□□□ -2.63
UFD1Q92890 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.35□□□□□ -2.63
UFD1Q92890 MIR601-201ENST00000385256 79 ntBASIC-1.35□□□□□ -2.63
UFD1Q92890 MIR1255B2-201ENST00000408618 67 ntBASIC-1.35□□□□□ -2.63
UFD1Q92890 U6.81-201ENST00000612550 106 ntBASIC-1.35□□□□□ -2.63
UFD1Q92890 MIR6888-201ENST00000621977 67 ntBASIC-1.35□□□□□ -2.63
UFD1Q92890 MIR198-201ENST00000637333 62 ntBASIC-1.35□□□□□ -2.63
UFD1Q92890 RNU6-907P-201ENST00000390924 102 ntBASIC-1.36□□□□□ -2.63
UFD1Q92890 snoU83B.1-201ENST00000517136 88 ntBASIC-1.36□□□□□ -2.63
UFD1Q92890 MIR4796-201ENST00000580742 81 ntBASIC-1.36□□□□□ -2.63
UFD1Q92890 SNORD116-14-201ENST00000383894 92 ntBASIC-1.38□□□□□ -2.63
UFD1Q92890 SNORD116-17-201ENST00000383929 92 ntBASIC-1.38□□□□□ -2.63
UFD1Q92890 SNORD116-15-201ENST00000384445 92 ntBASIC-1.38□□□□□ -2.63
UFD1Q92890 SNORD116-19-201ENST00000384729 92 ntBASIC-1.38□□□□□ -2.63
UFD1Q92890 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.38□□□□□ -2.63
UFD1Q92890 CYP3A54P-201ENST00000566950 75 ntBASIC-1.38□□□□□ -2.63
UFD1Q92890 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.38□□□□□ -2.63
UFD1Q92890 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.38□□□□□ -2.63
UFD1Q92890 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.39□□□□□ -2.63
UFD1Q92890 AC138207.3-201ENST00000585289 166 ntBASIC-1.39□□□□□ -2.63
UFD1Q92890 MIR1236-201ENST00000408340 102 ntBASIC-1.4□□□□□ -2.63
UFD1Q92890 MIR1468-201ENST00000410600 86 ntBASIC-1.4□□□□□ -2.63
UFD1Q92890 AC090425.1-201ENST00000610007 140 ntBASIC-1.4□□□□□ -2.63
UFD1Q92890 MIR521-2-201ENST00000384818 87 ntBASIC-1.41□□□□□ -2.64
UFD1Q92890 RNU6-537P-201ENST00000517277 103 ntBASIC-1.41□□□□□ -2.64
UFD1Q92890 RNU6-924P-201ENST00000362926 108 ntBASIC-1.42□□□□□ -2.64
UFD1Q92890 MIR1302-5-201ENST00000408164 150 ntBASIC-1.42□□□□□ -2.64
UFD1Q92890 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.42□□□□□ -2.64
UFD1Q92890 RNU7-61P-201ENST00000515897 61 ntBASIC-1.42□□□□□ -2.64
UFD1Q92890 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.42□□□□□ -2.64
UFD1Q92890 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.43□□□□□ -2.64
UFD1Q92890 MIR590-201ENST00000385008 97 ntBASIC-1.43□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 221.1 ms