Protein–RNA interactions for Protein: Q92890

UFD1, Ubiquitin recognition factor in ER-associated degradation protein 1, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1Q92890 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.24□□□□□ -2.61
UFD1Q92890 MIR548I1-201ENST00000408810 149 ntBASIC-1.24□□□□□ -2.61
UFD1Q92890 RNU6-1212P-201ENST00000517023 104 ntBASIC-1.24□□□□□ -2.61
UFD1Q92890 RNU6-208P-201ENST00000362431 107 ntBASIC-1.25□□□□□ -2.61
UFD1Q92890 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.25□□□□□ -2.61
UFD1Q92890 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.25□□□□□ -2.61
UFD1Q92890 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.25□□□□□ -2.61
UFD1Q92890 RNU6-346P-201ENST00000516288 111 ntBASIC-1.25□□□□□ -2.61
UFD1Q92890 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.25□□□□□ -2.61
UFD1Q92890 RNU5F-1-201ENST00000362507 117 ntBASIC-1.26□□□□□ -2.61
UFD1Q92890 RNU6-431P-201ENST00000383874 107 ntBASIC-1.26□□□□□ -2.61
UFD1Q92890 RNY1P5-201ENST00000383890 115 ntBASIC-1.26□□□□□ -2.61
UFD1Q92890 RNU6-260P-201ENST00000384092 107 ntBASIC-1.26□□□□□ -2.61
UFD1Q92890 MIR124-2-201ENST00000385081 109 ntBASIC-1.26□□□□□ -2.61
UFD1Q92890 SNORD64-201ENST00000386683 67 ntBASIC-1.26□□□□□ -2.61
UFD1Q92890 snoU13.17-201ENST00000458802 104 ntBASIC-1.26□□□□□ -2.61
UFD1Q92890 SCARNA18B-201ENST00000458806 135 ntBASIC-1.26□□□□□ -2.61
UFD1Q92890 AC090617.8-201ENST00000623339 167 ntBASIC-1.26□□□□□ -2.61
UFD1Q92890 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.27□□□□□ -2.61
UFD1Q92890 SNORD58A-201ENST00000383875 65 ntBASIC-1.27□□□□□ -2.61
UFD1Q92890 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.27□□□□□ -2.61
UFD1Q92890 Y_RNA.506-201ENST00000384494 102 ntBASIC-1.27□□□□□ -2.61
UFD1Q92890 RNU6-972P-201ENST00000391208 107 ntBASIC-1.27□□□□□ -2.61
UFD1Q92890 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.27□□□□□ -2.61
UFD1Q92890 RNU6-659P-201ENST00000516454 104 ntBASIC-1.27□□□□□ -2.61
UFD1Q92890 MIR4773-1-201ENST00000637203 78 ntBASIC-1.27□□□□□ -2.61
UFD1Q92890 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.28□□□□□ -2.61
UFD1Q92890 SCARNA23-201ENST00000516060 130 ntBASIC-1.28□□□□□ -2.61
UFD1Q92890 AL353803.5-201ENST00000599815 141 ntBASIC-1.28□□□□□ -2.61
UFD1Q92890 RNU6-824P-201ENST00000363724 104 ntBASIC-1.29□□□□□ -2.62
UFD1Q92890 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.29□□□□□ -2.62
UFD1Q92890 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.29□□□□□ -2.62
UFD1Q92890 MIR147A-201ENST00000385079 72 ntBASIC-1.29□□□□□ -2.62
UFD1Q92890 RNU6-887P-201ENST00000410660 100 ntBASIC-1.29□□□□□ -2.62
UFD1Q92890 MIR382-201ENST00000637119 76 ntBASIC-1.29□□□□□ -2.62
UFD1Q92890 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.29□□□□□ -2.62
UFD1Q92890 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.3□□□□□ -2.62
UFD1Q92890 RNA5SP180-201ENST00000516181 101 ntBASIC-1.3□□□□□ -2.62
UFD1Q92890 RNU6-412P-201ENST00000516434 106 ntBASIC-1.3□□□□□ -2.62
UFD1Q92890 RNA5SP147-201ENST00000516493 109 ntBASIC-1.3□□□□□ -2.62
UFD1Q92890 RNU6-255P-201ENST00000516957 105 ntBASIC-1.3□□□□□ -2.62
UFD1Q92890 MIR6509-201ENST00000614603 85 ntBASIC-1.3□□□□□ -2.62
UFD1Q92890 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.31□□□□□ -2.62
UFD1Q92890 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.31□□□□□ -2.62
UFD1Q92890 RNU6-880P-201ENST00000384526 107 ntBASIC-1.31□□□□□ -2.62
UFD1Q92890 RNU6-904P-201ENST00000516206 101 ntBASIC-1.31□□□□□ -2.62
UFD1Q92890 AC026421.1-201ENST00000519101 163 ntBASIC-1.31□□□□□ -2.62
UFD1Q92890 MIR4464-201ENST00000580818 92 ntBASIC-1.31□□□□□ -2.62
UFD1Q92890 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.31□□□□□ -2.62
UFD1Q92890 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.32□□□□□ -2.62
UFD1Q92890 SNORA2.1-201ENST00000363089 137 ntBASIC-1.32□□□□□ -2.62
UFD1Q92890 SNORD114-17-201ENST00000364699 75 ntBASIC-1.32□□□□□ -2.62
UFD1Q92890 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.32□□□□□ -2.62
UFD1Q92890 MIR203A-201ENST00000384836 110 ntBASIC-1.32□□□□□ -2.62
UFD1Q92890 SNORA19.1-201ENST00000410656 129 ntBASIC-1.32□□□□□ -2.62
UFD1Q92890 SNX3P1X-201ENST00000414887 175 ntBASIC-1.32□□□□□ -2.62
UFD1Q92890 RNU6-706P-201ENST00000517229 104 ntBASIC-1.32□□□□□ -2.62
UFD1Q92890 MIR3657-201ENST00000584818 117 ntBASIC-1.32□□□□□ -2.62
UFD1Q92890 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.33□□□□□ -2.62
UFD1Q92890 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.33□□□□□ -2.62
UFD1Q92890 SNORA33.1-201ENST00000364957 130 ntBASIC-1.33□□□□□ -2.62
UFD1Q92890 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.33□□□□□ -2.62
UFD1Q92890 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.33□□□□□ -2.62
UFD1Q92890 SNORD116-10-201ENST00000363791 102 ntBASIC-1.34□□□□□ -2.62
UFD1Q92890 RNA5SP331-201ENST00000364986 107 ntBASIC-1.34□□□□□ -2.62
UFD1Q92890 AL691482.2-201ENST00000457453 84 ntBASIC-1.34□□□□□ -2.62
UFD1Q92890 AL445584.3-201ENST00000617173 78 ntBASIC-1.34□□□□□ -2.62
UFD1Q92890 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.35□□□□□ -2.63
UFD1Q92890 SNORD116-21-201ENST00000384507 92 ntBASIC-1.35□□□□□ -2.63
UFD1Q92890 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.35□□□□□ -2.63
UFD1Q92890 MIR601-201ENST00000385256 79 ntBASIC-1.35□□□□□ -2.63
UFD1Q92890 MIR1255B2-201ENST00000408618 67 ntBASIC-1.35□□□□□ -2.63
UFD1Q92890 U6.81-201ENST00000612550 106 ntBASIC-1.35□□□□□ -2.63
UFD1Q92890 MIR6888-201ENST00000621977 67 ntBASIC-1.35□□□□□ -2.63
UFD1Q92890 MIR198-201ENST00000637333 62 ntBASIC-1.35□□□□□ -2.63
UFD1Q92890 RNU6-907P-201ENST00000390924 102 ntBASIC-1.36□□□□□ -2.63
UFD1Q92890 snoU83B.1-201ENST00000517136 88 ntBASIC-1.36□□□□□ -2.63
UFD1Q92890 MIR4796-201ENST00000580742 81 ntBASIC-1.36□□□□□ -2.63
UFD1Q92890 SNORD116-14-201ENST00000383894 92 ntBASIC-1.38□□□□□ -2.63
UFD1Q92890 SNORD116-17-201ENST00000383929 92 ntBASIC-1.38□□□□□ -2.63
UFD1Q92890 SNORD116-15-201ENST00000384445 92 ntBASIC-1.38□□□□□ -2.63
UFD1Q92890 SNORD116-19-201ENST00000384729 92 ntBASIC-1.38□□□□□ -2.63
UFD1Q92890 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.38□□□□□ -2.63
UFD1Q92890 CYP3A54P-201ENST00000566950 75 ntBASIC-1.38□□□□□ -2.63
UFD1Q92890 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.38□□□□□ -2.63
UFD1Q92890 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.38□□□□□ -2.63
UFD1Q92890 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.39□□□□□ -2.63
UFD1Q92890 AC138207.3-201ENST00000585289 166 ntBASIC-1.39□□□□□ -2.63
UFD1Q92890 MIR1236-201ENST00000408340 102 ntBASIC-1.4□□□□□ -2.63
UFD1Q92890 MIR1468-201ENST00000410600 86 ntBASIC-1.4□□□□□ -2.63
UFD1Q92890 AC090425.1-201ENST00000610007 140 ntBASIC-1.4□□□□□ -2.63
UFD1Q92890 MIR521-2-201ENST00000384818 87 ntBASIC-1.41□□□□□ -2.64
UFD1Q92890 RNU6-537P-201ENST00000517277 103 ntBASIC-1.41□□□□□ -2.64
UFD1Q92890 RNU6-924P-201ENST00000362926 108 ntBASIC-1.42□□□□□ -2.64
UFD1Q92890 MIR1302-5-201ENST00000408164 150 ntBASIC-1.42□□□□□ -2.64
UFD1Q92890 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.42□□□□□ -2.64
UFD1Q92890 RNU7-61P-201ENST00000515897 61 ntBASIC-1.42□□□□□ -2.64
UFD1Q92890 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.42□□□□□ -2.64
UFD1Q92890 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.43□□□□□ -2.64
UFD1Q92890 MIR590-201ENST00000385008 97 ntBASIC-1.43□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 168.8 ms