Protein–RNA interactions for Protein: Q86VI4

LAPTM4B, Lysosomal-associated transmembrane protein 4B, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4BQ86VI4 RNA5SP363-201ENST00000365072 115 ntBASIC1.56□□□□□ -2.16
LAPTM4BQ86VI4 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
LAPTM4BQ86VI4 AC108667.1-201ENST00000428618 249 ntBASIC1.56□□□□□ -2.16
LAPTM4BQ86VI4 MIR4255-201ENST00000579351 72 ntBASIC1.56□□□□□ -2.16
LAPTM4BQ86VI4 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.55□□□□□ -2.16
LAPTM4BQ86VI4 RNY1P8-201ENST00000383970 114 ntBASIC1.55□□□□□ -2.16
LAPTM4BQ86VI4 MIR4303-201ENST00000581299 66 ntBASIC1.55□□□□□ -2.16
LAPTM4BQ86VI4 SNORD2-201ENST00000459163 69 ntBASIC1.54□□□□□ -2.16
LAPTM4BQ86VI4 Y_RNA.164-201ENST00000363709 102 ntBASIC1.53□□□□□ -2.16
LAPTM4BQ86VI4 RNA5SP222-201ENST00000411039 105 ntBASIC1.53□□□□□ -2.16
LAPTM4BQ86VI4 RNA5SP255-201ENST00000516370 107 ntBASIC1.53□□□□□ -2.16
LAPTM4BQ86VI4 RNU6-924P-201ENST00000362926 108 ntBASIC1.52□□□□□ -2.17
LAPTM4BQ86VI4 SNORD114-24-201ENST00000365029 72 ntBASIC1.52□□□□□ -2.17
LAPTM4BQ86VI4 RNU4-45P-201ENST00000365469 141 ntBASIC1.52□□□□□ -2.17
LAPTM4BQ86VI4 RNU4-62P-201ENST00000410125 130 ntBASIC1.52□□□□□ -2.17
LAPTM4BQ86VI4 RNA5SP470-201ENST00000516463 106 ntBASIC1.52□□□□□ -2.17
LAPTM4BQ86VI4 SNORD114-29-201ENST00000364819 70 ntBASIC1.51□□□□□ -2.17
LAPTM4BQ86VI4 SNORA67.5-201ENST00000391036 107 ntBASIC1.5□□□□□ -2.17
LAPTM4BQ86VI4 RNU7-151P-201ENST00000516930 53 ntBASIC1.5□□□□□ -2.17
LAPTM4BQ86VI4 RNU7-188P-201ENST00000517063 64 ntBASIC1.5□□□□□ -2.17
LAPTM4BQ86VI4 U2.18-201ENST00000622185 84 ntBASIC1.5□□□□□ -2.17
LAPTM4BQ86VI4 RNU1-42P-201ENST00000364033 160 ntBASIC1.49□□□□□ -2.17
LAPTM4BQ86VI4 SNORA49-201ENST00000386157 136 ntBASIC1.49□□□□□ -2.17
LAPTM4BQ86VI4 AC069271.1-201ENST00000445577 156 ntBASIC1.49□□□□□ -2.17
LAPTM4BQ86VI4 MIR5706-201ENST00000579841 80 ntBASIC1.49□□□□□ -2.17
LAPTM4BQ86VI4 RNU6-598P-201ENST00000364017 105 ntBASIC1.48□□□□□ -2.17
LAPTM4BQ86VI4 RNU1-29P-201ENST00000606574 126 ntBASIC1.48□□□□□ -2.17
LAPTM4BQ86VI4 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
LAPTM4BQ86VI4 Y_RNA.224-201ENST00000364308 111 ntBASIC1.47□□□□□ -2.17
LAPTM4BQ86VI4 MIRLET7B-201ENST00000385140 83 ntBASIC1.47□□□□□ -2.17
LAPTM4BQ86VI4 RNU6-1206P-201ENST00000516339 103 ntBASIC1.47□□□□□ -2.17
LAPTM4BQ86VI4 RNU6-782P-201ENST00000516852 104 ntBASIC1.47□□□□□ -2.17
LAPTM4BQ86VI4 SNORD53B-201ENST00000577887 78 ntBASIC1.47□□□□□ -2.17
LAPTM4BQ86VI4 MIR378A-201ENST00000362177 66 ntBASIC1.46□□□□□ -2.18
LAPTM4BQ86VI4 Y_RNA.69-201ENST00000362885 109 ntBASIC1.46□□□□□ -2.18
LAPTM4BQ86VI4 RNU6-986P-201ENST00000363133 102 ntBASIC1.46□□□□□ -2.18
LAPTM4BQ86VI4 MIR618-201ENST00000385287 98 ntBASIC1.46□□□□□ -2.18
LAPTM4BQ86VI4 MIR1323-201ENST00000408090 73 ntBASIC1.46□□□□□ -2.18
LAPTM4BQ86VI4 RNU6-1053P-201ENST00000515930 101 ntBASIC1.46□□□□□ -2.18
LAPTM4BQ86VI4 AP1B1P2-201ENST00000416196 106 ntBASIC1.45□□□□□ -2.18
LAPTM4BQ86VI4 RNU7-160P-201ENST00000516660 62 ntBASIC1.45□□□□□ -2.18
LAPTM4BQ86VI4 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC1.45□□□□□ -2.18
LAPTM4BQ86VI4 RNU6-997P-201ENST00000384725 107 ntBASIC1.44□□□□□ -2.18
LAPTM4BQ86VI4 MIR329-2-201ENST00000385029 84 ntBASIC1.44□□□□□ -2.18
LAPTM4BQ86VI4 BX248123.2-201ENST00000606318 124 ntBASIC1.44□□□□□ -2.18
LAPTM4BQ86VI4 RNU6-1036P-201ENST00000383959 104 ntBASIC1.43□□□□□ -2.18
LAPTM4BQ86VI4 SNORA36.2-201ENST00000384004 127 ntBASIC1.43□□□□□ -2.18
LAPTM4BQ86VI4 RNU6-724P-201ENST00000390958 105 ntBASIC1.43□□□□□ -2.18
LAPTM4BQ86VI4 SNORA67.6-201ENST00000391093 99 ntBASIC1.43□□□□□ -2.18
LAPTM4BQ86VI4 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
LAPTM4BQ86VI4 RNA5SP517-201ENST00000364724 117 ntBASIC1.42□□□□□ -2.18
LAPTM4BQ86VI4 MIR1287-201ENST00000408492 90 ntBASIC1.42□□□□□ -2.18
LAPTM4BQ86VI4 RNU7-95P-201ENST00000459222 64 ntBASIC1.42□□□□□ -2.18
LAPTM4BQ86VI4 RNU6-229P-201ENST00000516614 102 ntBASIC1.42□□□□□ -2.18
LAPTM4BQ86VI4 RNU6-175P-201ENST00000516896 107 ntBASIC1.42□□□□□ -2.18
LAPTM4BQ86VI4 RNA5SP404-201ENST00000517118 132 ntBASIC1.42□□□□□ -2.18
LAPTM4BQ86VI4 SNORA25.18-201ENST00000607153 114 ntBASIC1.42□□□□□ -2.18
LAPTM4BQ86VI4 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.41□□□□□ -2.18
LAPTM4BQ86VI4 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
LAPTM4BQ86VI4 RNU6-502P-201ENST00000362419 108 ntBASIC1.41□□□□□ -2.18
LAPTM4BQ86VI4 RNU6-995P-201ENST00000391244 107 ntBASIC1.41□□□□□ -2.18
LAPTM4BQ86VI4 MIR1304-201ENST00000408243 91 ntBASIC1.41□□□□□ -2.18
LAPTM4BQ86VI4 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.41□□□□□ -2.18
LAPTM4BQ86VI4 Y_RNA.118-201ENST00000363300 101 ntBASIC1.4□□□□□ -2.19
LAPTM4BQ86VI4 SNORA2A-201ENST00000383885 135 ntBASIC1.4□□□□□ -2.19
LAPTM4BQ86VI4 AL354695.1-201ENST00000427935 228 ntBASIC1.4□□□□□ -2.19
LAPTM4BQ86VI4 MIR4498-201ENST00000577599 66 ntBASIC1.4□□□□□ -2.19
LAPTM4BQ86VI4 MIR548AL-201ENST00000578416 97 ntBASIC1.4□□□□□ -2.19
LAPTM4BQ86VI4 AL353803.5-201ENST00000599815 141 ntBASIC1.4□□□□□ -2.19
LAPTM4BQ86VI4 U7.6-201ENST00000610841 64 ntBASIC1.4□□□□□ -2.19
LAPTM4BQ86VI4 MIR26B-201ENST00000362251 77 ntBASIC1.39□□□□□ -2.19
LAPTM4BQ86VI4 Y_RNA.226-201ENST00000364337 114 ntBASIC1.39□□□□□ -2.19
LAPTM4BQ86VI4 Y_RNA.423-201ENST00000384057 113 ntBASIC1.39□□□□□ -2.19
LAPTM4BQ86VI4 SNORD26-201ENST00000384147 75 ntBASIC1.39□□□□□ -2.19
LAPTM4BQ86VI4 MIR320A-201ENST00000385302 82 ntBASIC1.39□□□□□ -2.19
LAPTM4BQ86VI4 RNU6-1250P-201ENST00000391218 107 ntBASIC1.39□□□□□ -2.19
LAPTM4BQ86VI4 snoU13.31-201ENST00000607291 104 ntBASIC1.39□□□□□ -2.19
LAPTM4BQ86VI4 RNU1-124P-201ENST00000363861 145 ntBASIC1.38□□□□□ -2.19
LAPTM4BQ86VI4 RNU6ATAC14P-201ENST00000516218 91 ntBASIC1.38□□□□□ -2.19
LAPTM4BQ86VI4 RNU6-1232P-201ENST00000516299 86 ntBASIC1.38□□□□□ -2.19
LAPTM4BQ86VI4 SNORA31.24-201ENST00000517232 57 ntBASIC1.38□□□□□ -2.19
LAPTM4BQ86VI4 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.38□□□□□ -2.19
LAPTM4BQ86VI4 ACA64.5-201ENST00000516207 127 ntBASIC1.37□□□□□ -2.19
LAPTM4BQ86VI4 MIR7111-201ENST00000619751 72 ntBASIC1.37□□□□□ -2.19
LAPTM4BQ86VI4 AC084368.1-201ENST00000620935 65 ntBASIC1.37□□□□□ -2.19
LAPTM4BQ86VI4 RNU6-828P-201ENST00000364876 107 ntBASIC1.36□□□□□ -2.19
LAPTM4BQ86VI4 MIR548AA1-201ENST00000384971 97 ntBASIC1.36□□□□□ -2.19
LAPTM4BQ86VI4 RNU6-1262P-201ENST00000516217 96 ntBASIC1.36□□□□□ -2.19
LAPTM4BQ86VI4 MIR4432-201ENST00000581823 84 ntBASIC1.35□□□□□ -2.19
LAPTM4BQ86VI4 AL451105.1-201ENST00000450005 189 ntBASIC1.34□□□□□ -2.19
LAPTM4BQ86VI4 MIR4421-201ENST00000578133 69 ntBASIC1.34□□□□□ -2.19
LAPTM4BQ86VI4 AL353765.1-201ENST00000605514 183 ntBASIC1.34□□□□□ -2.19
LAPTM4BQ86VI4 MIR7974-201ENST00000615835 79 ntBASIC1.34□□□□□ -2.19
LAPTM4BQ86VI4 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC1.33□□□□□ -2.2
LAPTM4BQ86VI4 MIR4677-201ENST00000584153 80 ntBASIC1.33□□□□□ -2.2
LAPTM4BQ86VI4 AC108676.2-201ENST00000605225 163 ntBASIC1.33□□□□□ -2.2
LAPTM4BQ86VI4 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
LAPTM4BQ86VI4 RNU6-945P-201ENST00000383947 107 ntBASIC1.32□□□□□ -2.2
LAPTM4BQ86VI4 MIR140-201ENST00000385282 100 ntBASIC1.32□□□□□ -2.2
LAPTM4BQ86VI4 RNU6-696P-201ENST00000390834 107 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 269.6 ms