Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 MIR519A2-201ENST00000384990 87 ntBASIC-0.96□□□□□ -2.56
IRX3P78415 RNU6-182P-201ENST00000516970 105 ntBASIC-0.96□□□□□ -2.56
IRX3P78415 MIR1246-201ENST00000636535 73 ntBASIC-0.96□□□□□ -2.56
IRX3P78415 MIR548U-201ENST00000390728 81 ntBASIC-0.97□□□□□ -2.56
IRX3P78415 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-0.97□□□□□ -2.56
IRX3P78415 CYP3A54P-201ENST00000566950 75 ntBASIC-0.97□□□□□ -2.56
IRX3P78415 RNY3P2-201ENST00000362918 102 ntBASIC-0.98□□□□□ -2.57
IRX3P78415 RNU6-382P-201ENST00000365181 106 ntBASIC-0.98□□□□□ -2.57
IRX3P78415 RNU6-80P-201ENST00000384195 107 ntBASIC-0.98□□□□□ -2.57
IRX3P78415 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.98□□□□□ -2.57
IRX3P78415 MIR29B1-201ENST00000385015 81 ntBASIC-0.98□□□□□ -2.57
IRX3P78415 RNU6-576P-201ENST00000390854 102 ntBASIC-0.98□□□□□ -2.57
IRX3P78415 RNA5SP292-201ENST00000390974 118 ntBASIC-0.98□□□□□ -2.57
IRX3P78415 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.98□□□□□ -2.57
IRX3P78415 AL078595.1-201ENST00000404458 226 ntBASIC-0.98□□□□□ -2.57
IRX3P78415 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.98□□□□□ -2.57
IRX3P78415 U7.5-201ENST00000517224 61 ntBASIC-0.98□□□□□ -2.57
IRX3P78415 MIR3144-201ENST00000579460 79 ntBASIC-0.98□□□□□ -2.57
IRX3P78415 AL353621.2-201ENST00000605340 133 ntBASIC-0.98□□□□□ -2.57
IRX3P78415 MIR4320-201ENST00000636981 65 ntBASIC-0.98□□□□□ -2.57
IRX3P78415 SNORD115-33-201ENST00000363723 82 ntBASIC-0.99□□□□□ -2.57
IRX3P78415 SNORA62.4-201ENST00000365504 151 ntBASIC-0.99□□□□□ -2.57
IRX3P78415 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.99□□□□□ -2.57
IRX3P78415 MIR577-201ENST00000385196 96 ntBASIC-0.99□□□□□ -2.57
IRX3P78415 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.99□□□□□ -2.57
IRX3P78415 MIR3613-201ENST00000579844 87 ntBASIC-0.99□□□□□ -2.57
IRX3P78415 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.99□□□□□ -2.57
IRX3P78415 RNU6-832P-201ENST00000363319 107 ntBASIC-1□□□□□ -2.57
IRX3P78415 RNU6-824P-201ENST00000363724 104 ntBASIC-1□□□□□ -2.57
IRX3P78415 RNU6-164P-201ENST00000364604 103 ntBASIC-1□□□□□ -2.57
IRX3P78415 SNORD45B-201ENST00000364617 72 ntBASIC-1□□□□□ -2.57
IRX3P78415 Y_RNA.284-201ENST00000364806 102 ntBASIC-1□□□□□ -2.57
IRX3P78415 MIR520D-201ENST00000385002 87 ntBASIC-1□□□□□ -2.57
IRX3P78415 MIR569-201ENST00000385228 96 ntBASIC-1□□□□□ -2.57
IRX3P78415 SNORA19.1-201ENST00000410656 129 ntBASIC-1□□□□□ -2.57
IRX3P78415 RNU6-732P-201ENST00000516033 103 ntBASIC-1□□□□□ -2.57
IRX3P78415 MIR4756-201ENST00000577874 78 ntBASIC-1□□□□□ -2.57
IRX3P78415 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.01□□□□□ -2.57
IRX3P78415 SNORA63.2-201ENST00000362603 126 ntBASIC-1.01□□□□□ -2.57
IRX3P78415 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.01□□□□□ -2.57
IRX3P78415 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.01□□□□□ -2.57
IRX3P78415 RNU6-563P-201ENST00000364872 108 ntBASIC-1.01□□□□□ -2.57
IRX3P78415 RNU6-644P-201ENST00000391155 98 ntBASIC-1.01□□□□□ -2.57
IRX3P78415 RNA5SP266-201ENST00000410273 108 ntBASIC-1.01□□□□□ -2.57
IRX3P78415 RNU6-168P-201ENST00000516189 101 ntBASIC-1.01□□□□□ -2.57
IRX3P78415 MIR548Z-201ENST00000584743 97 ntBASIC-1.01□□□□□ -2.57
IRX3P78415 RNU6-574P-201ENST00000384265 107 ntBASIC-1.02□□□□□ -2.57
IRX3P78415 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.02□□□□□ -2.57
IRX3P78415 MIR548H1-201ENST00000408610 102 ntBASIC-1.02□□□□□ -2.57
IRX3P78415 MIR3064-201ENST00000581130 66 ntBASIC-1.02□□□□□ -2.57
IRX3P78415 MIR3657-201ENST00000584818 117 ntBASIC-1.02□□□□□ -2.57
IRX3P78415 MIR5683-201ENST00000636514 76 ntBASIC-1.02□□□□□ -2.57
IRX3P78415 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.03□□□□□ -2.57
IRX3P78415 MIR548A1-201ENST00000385041 97 ntBASIC-1.03□□□□□ -2.57
IRX3P78415 RNU7-24P-201ENST00000458867 62 ntBASIC-1.03□□□□□ -2.57
IRX3P78415 RNU6-62P-201ENST00000516526 102 ntBASIC-1.03□□□□□ -2.57
IRX3P78415 RNU6-388P-201ENST00000517012 105 ntBASIC-1.03□□□□□ -2.57
IRX3P78415 RNU6-389P-201ENST00000517048 105 ntBASIC-1.03□□□□□ -2.57
IRX3P78415 AC138207.3-201ENST00000585289 166 ntBASIC-1.03□□□□□ -2.57
IRX3P78415 MIR4773-1-201ENST00000637203 78 ntBASIC-1.03□□□□□ -2.57
IRX3P78415 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.04□□□□□ -2.58
IRX3P78415 SNORD18.1-201ENST00000363807 70 ntBASIC-1.04□□□□□ -2.58
IRX3P78415 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.04□□□□□ -2.58
IRX3P78415 RNU6-608P-201ENST00000383927 104 ntBASIC-1.04□□□□□ -2.58
IRX3P78415 RNU6-260P-201ENST00000384092 107 ntBASIC-1.04□□□□□ -2.58
IRX3P78415 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.04□□□□□ -2.58
IRX3P78415 AL353691.2-201ENST00000443795 59 ntBASIC-1.04□□□□□ -2.58
IRX3P78415 RNU6-518P-201ENST00000516056 96 ntBASIC-1.04□□□□□ -2.58
IRX3P78415 AL513043.2-201ENST00000573941 143 ntBASIC-1.04□□□□□ -2.58
IRX3P78415 RNU6-924P-201ENST00000362926 108 ntBASIC-1.05□□□□□ -2.58
IRX3P78415 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.05□□□□□ -2.58
IRX3P78415 RNU6-804P-201ENST00000384286 107 ntBASIC-1.05□□□□□ -2.58
IRX3P78415 AC108019.1-201ENST00000512540 175 ntBASIC-1.05□□□□□ -2.58
IRX3P78415 RNA5SP180-201ENST00000516181 101 ntBASIC-1.05□□□□□ -2.58
IRX3P78415 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.05□□□□□ -2.58
IRX3P78415 MIR4770-201ENST00000579149 58 ntBASIC-1.05□□□□□ -2.58
IRX3P78415 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.05□□□□□ -2.58
IRX3P78415 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.06□□□□□ -2.58
IRX3P78415 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.06□□□□□ -2.58
IRX3P78415 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.06□□□□□ -2.58
IRX3P78415 AL157777.2-201ENST00000258070 137 ntBASIC-1.07□□□□□ -2.58
IRX3P78415 RNU6-478P-201ENST00000363904 110 ntBASIC-1.07□□□□□ -2.58
IRX3P78415 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.07□□□□□ -2.58
IRX3P78415 RNU6-813P-201ENST00000384691 107 ntBASIC-1.07□□□□□ -2.58
IRX3P78415 SNORA40-201ENST00000388090 126 ntBASIC-1.07□□□□□ -2.58
IRX3P78415 RNU6-258P-201ENST00000390884 101 ntBASIC-1.07□□□□□ -2.58
IRX3P78415 MIR1285-2-201ENST00000408311 88 ntBASIC-1.07□□□□□ -2.58
IRX3P78415 MIR6509-201ENST00000614603 85 ntBASIC-1.07□□□□□ -2.58
IRX3P78415 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.07□□□□□ -2.58
IRX3P78415 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.08□□□□□ -2.58
IRX3P78415 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.08□□□□□ -2.58
IRX3P78415 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.08□□□□□ -2.58
IRX3P78415 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.08□□□□□ -2.58
IRX3P78415 MIR548Q-201ENST00000408404 100 ntBASIC-1.08□□□□□ -2.58
IRX3P78415 RNU6-983P-201ENST00000516004 103 ntBASIC-1.08□□□□□ -2.58
IRX3P78415 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.08□□□□□ -2.58
IRX3P78415 AC104996.3-201ENST00000590718 94 ntBASIC-1.08□□□□□ -2.58
IRX3P78415 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.09□□□□□ -2.58
IRX3P78415 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.09□□□□□ -2.58
IRX3P78415 SNORD115-31-201ENST00000365318 82 ntBASIC-1.09□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 182.4 ms