Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.28□□□□□ -2.61
CNTNAP1P78357 RNU6-431P-201ENST00000383874 107 ntBASIC-1.28□□□□□ -2.61
CNTNAP1P78357 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.28□□□□□ -2.61
CNTNAP1P78357 RNU6-905P-201ENST00000384434 107 ntBASIC-1.28□□□□□ -2.61
CNTNAP1P78357 RNU6-813P-201ENST00000384691 107 ntBASIC-1.28□□□□□ -2.61
CNTNAP1P78357 RNU6-62P-201ENST00000516526 102 ntBASIC-1.28□□□□□ -2.61
CNTNAP1P78357 YWHAEP3-201ENST00000582767 121 ntBASIC-1.28□□□□□ -2.61
CNTNAP1P78357 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.29□□□□□ -2.62
CNTNAP1P78357 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.29□□□□□ -2.62
CNTNAP1P78357 SNORD4B-201ENST00000459083 72 ntBASIC-1.29□□□□□ -2.62
CNTNAP1P78357 RNU6-772P-201ENST00000516042 105 ntBASIC-1.3□□□□□ -2.62
CNTNAP1P78357 RNU6-388P-201ENST00000517012 105 ntBASIC-1.3□□□□□ -2.62
CNTNAP1P78357 RNU6-389P-201ENST00000517048 105 ntBASIC-1.3□□□□□ -2.62
CNTNAP1P78357 MIR3613-201ENST00000579844 87 ntBASIC-1.3□□□□□ -2.62
CNTNAP1P78357 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.31□□□□□ -2.62
CNTNAP1P78357 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.31□□□□□ -2.62
CNTNAP1P78357 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.31□□□□□ -2.62
CNTNAP1P78357 SNORD18.2-201ENST00000459604 70 ntBASIC-1.31□□□□□ -2.62
CNTNAP1P78357 MIR4520-1-201ENST00000582609 70 ntBASIC-1.31□□□□□ -2.62
CNTNAP1P78357 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.31□□□□□ -2.62
CNTNAP1P78357 AL157777.2-201ENST00000258070 137 ntBASIC-1.32□□□□□ -2.62
CNTNAP1P78357 RNU6-990P-201ENST00000364385 104 ntBASIC-1.32□□□□□ -2.62
CNTNAP1P78357 MIR548A1-201ENST00000385041 97 ntBASIC-1.32□□□□□ -2.62
CNTNAP1P78357 MIR124-2-201ENST00000385081 109 ntBASIC-1.32□□□□□ -2.62
CNTNAP1P78357 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.32□□□□□ -2.62
CNTNAP1P78357 AL353621.2-201ENST00000605340 133 ntBASIC-1.32□□□□□ -2.62
CNTNAP1P78357 AC103810.7-201ENST00000607821 91 ntBASIC-1.32□□□□□ -2.62
CNTNAP1P78357 U6.96-201ENST00000636425 70 ntBASIC-1.32□□□□□ -2.62
CNTNAP1P78357 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.33□□□□□ -2.62
CNTNAP1P78357 MIR147A-201ENST00000385079 72 ntBASIC-1.33□□□□□ -2.62
CNTNAP1P78357 RNU6-118P-201ENST00000516552 102 ntBASIC-1.33□□□□□ -2.62
CNTNAP1P78357 SNORD18.1-201ENST00000363807 70 ntBASIC-1.34□□□□□ -2.62
CNTNAP1P78357 MTND4LP9-201ENST00000427694 174 ntBASIC-1.34□□□□□ -2.62
CNTNAP1P78357 RNU6-426P-201ENST00000516464 97 ntBASIC-1.34□□□□□ -2.62
CNTNAP1P78357 MIR5009-201ENST00000578736 100 ntBASIC-1.34□□□□□ -2.62
CNTNAP1P78357 MIR548Z-201ENST00000584743 97 ntBASIC-1.34□□□□□ -2.62
CNTNAP1P78357 AC132825.6-201ENST00000638861 357 ntBASIC-1.34□□□□□ -2.62
CNTNAP1P78357 RNA5SP93-201ENST00000362525 114 ntBASIC-1.34□□□□□ -2.62
CNTNAP1P78357 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.34□□□□□ -2.62
CNTNAP1P78357 RNU6-519P-201ENST00000410590 108 ntBASIC-1.34□□□□□ -2.62
CNTNAP1P78357 SNORD54-201ENST00000459159 67 ntBASIC-1.34□□□□□ -2.62
CNTNAP1P78357 RNU6-182P-201ENST00000516970 105 ntBASIC-1.34□□□□□ -2.62
CNTNAP1P78357 AC006254.2-201ENST00000603259 279 ntBASIC-1.34□□□□□ -2.62
CNTNAP1P78357 RNU6-208P-201ENST00000362431 107 ntBASIC-1.36□□□□□ -2.63
CNTNAP1P78357 SNORA40-201ENST00000388090 126 ntBASIC-1.36□□□□□ -2.63
CNTNAP1P78357 MTATP6P29-201ENST00000415057 132 ntBASIC-1.36□□□□□ -2.63
CNTNAP1P78357 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.37□□□□□ -2.63
CNTNAP1P78357 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.37□□□□□ -2.63
CNTNAP1P78357 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.37□□□□□ -2.63
CNTNAP1P78357 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.37□□□□□ -2.63
CNTNAP1P78357 MTND5P41-201ENST00000517498 206 ntBASIC-1.37□□□□□ -2.63
CNTNAP1P78357 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.38□□□□□ -2.63
CNTNAP1P78357 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.38□□□□□ -2.63
CNTNAP1P78357 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.38□□□□□ -2.63
CNTNAP1P78357 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.38□□□□□ -2.63
CNTNAP1P78357 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.38□□□□□ -2.63
CNTNAP1P78357 MIR889-201ENST00000401280 79 ntBASIC-1.38□□□□□ -2.63
CNTNAP1P78357 AC091912.2-201ENST00000624798 167 ntBASIC-1.38□□□□□ -2.63
CNTNAP1P78357 RNA5SP292-201ENST00000390974 118 ntBASIC-1.39□□□□□ -2.63
CNTNAP1P78357 RNU6-479P-201ENST00000516348 105 ntBASIC-1.39□□□□□ -2.63
CNTNAP1P78357 RNU6-260P-201ENST00000384092 107 ntBASIC-1.4□□□□□ -2.63
CNTNAP1P78357 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.4□□□□□ -2.63
CNTNAP1P78357 SNORA18.5-201ENST00000516616 101 ntBASIC-1.4□□□□□ -2.63
CNTNAP1P78357 MIR4777-201ENST00000583710 86 ntBASIC-1.4□□□□□ -2.63
CNTNAP1P78357 AL353803.5-201ENST00000599815 141 ntBASIC-1.4□□□□□ -2.63
CNTNAP1P78357 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.41□□□□□ -2.64
CNTNAP1P78357 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.41□□□□□ -2.64
CNTNAP1P78357 RNU6-382P-201ENST00000365181 106 ntBASIC-1.41□□□□□ -2.64
CNTNAP1P78357 RNU6-886P-201ENST00000384319 105 ntBASIC-1.41□□□□□ -2.64
CNTNAP1P78357 snoU13.17-201ENST00000458802 104 ntBASIC-1.41□□□□□ -2.64
CNTNAP1P78357 MIR4464-201ENST00000580818 92 ntBASIC-1.41□□□□□ -2.64
CNTNAP1P78357 RNU5F-1-201ENST00000362507 117 ntBASIC-1.42□□□□□ -2.64
CNTNAP1P78357 MIR548I1-201ENST00000408810 149 ntBASIC-1.42□□□□□ -2.64
CNTNAP1P78357 RNY4-201ENST00000516507 96 ntBASIC-1.42□□□□□ -2.64
CNTNAP1P78357 MIR3914-2-201ENST00000637339 95 ntBASIC-1.42□□□□□ -2.64
CNTNAP1P78357 SNORD114-17-201ENST00000364699 75 ntBASIC-1.43□□□□□ -2.64
CNTNAP1P78357 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.43□□□□□ -2.64
CNTNAP1P78357 RNU7-134P-201ENST00000458997 64 ntBASIC-1.43□□□□□ -2.64
CNTNAP1P78357 AC090617.8-201ENST00000623339 167 ntBASIC-1.43□□□□□ -2.64
CNTNAP1P78357 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.44□□□□□ -2.64
CNTNAP1P78357 SNORA2.1-201ENST00000363089 137 ntBASIC-1.44□□□□□ -2.64
CNTNAP1P78357 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.44□□□□□ -2.64
CNTNAP1P78357 SNORD90-201ENST00000391145 111 ntBASIC-1.44□□□□□ -2.64
CNTNAP1P78357 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.44□□□□□ -2.64
CNTNAP1P78357 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.44□□□□□ -2.64
CNTNAP1P78357 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.45□□□□□ -2.64
CNTNAP1P78357 RNU6-257P-201ENST00000410238 98 ntBASIC-1.45□□□□□ -2.64
CNTNAP1P78357 RNU7-107P-201ENST00000459121 61 ntBASIC-1.45□□□□□ -2.64
CNTNAP1P78357 U6.95-201ENST00000636931 70 ntBASIC-1.45□□□□□ -2.64
CNTNAP1P78357 RNU6-228P-201ENST00000362700 106 ntBASIC-1.46□□□□□ -2.64
CNTNAP1P78357 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.46□□□□□ -2.64
CNTNAP1P78357 RNU6-972P-201ENST00000391208 107 ntBASIC-1.46□□□□□ -2.64
CNTNAP1P78357 MIR548H1-201ENST00000408610 102 ntBASIC-1.46□□□□□ -2.64
CNTNAP1P78357 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.46□□□□□ -2.64
CNTNAP1P78357 RNU7-200P-201ENST00000516105 62 ntBASIC-1.46□□□□□ -2.64
CNTNAP1P78357 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.46□□□□□ -2.64
CNTNAP1P78357 RNU6-980P-201ENST00000516925 103 ntBASIC-1.46□□□□□ -2.64
CNTNAP1P78357 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.47□□□□□ -2.64
CNTNAP1P78357 RNU6-824P-201ENST00000363724 104 ntBASIC-1.47□□□□□ -2.64
CNTNAP1P78357 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.47□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 172 ms