Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 RNU6-260P-201ENST00000384092 107 ntBASIC-0.81□□□□□ -2.54
LIM2P55344 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.81□□□□□ -2.54
LIM2P55344 MIR590-201ENST00000385008 97 ntBASIC-0.81□□□□□ -2.54
LIM2P55344 RNU6-881P-201ENST00000516813 102 ntBASIC-0.81□□□□□ -2.54
LIM2P55344 YWHAEP3-201ENST00000582767 121 ntBASIC-0.81□□□□□ -2.54
LIM2P55344 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.81□□□□□ -2.54
LIM2P55344 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.82□□□□□ -2.54
LIM2P55344 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.82□□□□□ -2.54
LIM2P55344 RNU6-30P-201ENST00000384561 107 ntBASIC-0.82□□□□□ -2.54
LIM2P55344 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.82□□□□□ -2.54
LIM2P55344 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.83□□□□□ -2.54
LIM2P55344 RNU6-824P-201ENST00000363724 104 ntBASIC-0.83□□□□□ -2.54
LIM2P55344 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.83□□□□□ -2.54
LIM2P55344 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.83□□□□□ -2.54
LIM2P55344 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.83□□□□□ -2.54
LIM2P55344 MIR1236-201ENST00000408340 102 ntBASIC-0.83□□□□□ -2.54
LIM2P55344 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.83□□□□□ -2.54
LIM2P55344 SNORD22.1-201ENST00000516331 125 ntBASIC-0.83□□□□□ -2.54
LIM2P55344 MIR3681-201ENST00000580089 72 ntBASIC-0.83□□□□□ -2.54
LIM2P55344 U6.96-201ENST00000636425 70 ntBASIC-0.83□□□□□ -2.54
LIM2P55344 SNORA62.4-201ENST00000365504 151 ntBASIC-0.84□□□□□ -2.54
LIM2P55344 RNU6-106P-201ENST00000384405 107 ntBASIC-0.84□□□□□ -2.54
LIM2P55344 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.84□□□□□ -2.54
LIM2P55344 RNU6-721P-201ENST00000410155 105 ntBASIC-0.84□□□□□ -2.54
LIM2P55344 snoU13.17-201ENST00000458802 104 ntBASIC-0.84□□□□□ -2.54
LIM2P55344 RNU7-61P-201ENST00000515897 61 ntBASIC-0.84□□□□□ -2.54
LIM2P55344 MIR4796-201ENST00000580742 81 ntBASIC-0.84□□□□□ -2.54
LIM2P55344 MIR8068-201ENST00000618032 68 ntBASIC-0.84□□□□□ -2.54
LIM2P55344 RNU6-834P-201ENST00000362367 110 ntBASIC-0.85□□□□□ -2.55
LIM2P55344 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.85□□□□□ -2.55
LIM2P55344 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.85□□□□□ -2.55
LIM2P55344 U6.81-201ENST00000612550 106 ntBASIC-0.85□□□□□ -2.55
LIM2P55344 MIR4773-1-201ENST00000637203 78 ntBASIC-0.85□□□□□ -2.55
LIM2P55344 SNORA2.1-201ENST00000363089 137 ntBASIC-0.86□□□□□ -2.55
LIM2P55344 RNU6-554P-201ENST00000410466 106 ntBASIC-0.86□□□□□ -2.55
LIM2P55344 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.86□□□□□ -2.55
LIM2P55344 MIR6509-201ENST00000614603 85 ntBASIC-0.86□□□□□ -2.55
LIM2P55344 TMSB4XP3-201ENST00000445144 114 ntBASIC-0.87□□□□□ -2.55
LIM2P55344 AC022137.1-201ENST00000483735 151 ntBASIC-0.87□□□□□ -2.55
LIM2P55344 RNA5SP67-201ENST00000516422 131 ntBASIC-0.87□□□□□ -2.55
LIM2P55344 MIR548AX-201ENST00000580117 73 ntBASIC-0.87□□□□□ -2.55
LIM2P55344 AL365222.1-201ENST00000614661 98 ntBASIC-0.87□□□□□ -2.55
LIM2P55344 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.88□□□□□ -2.55
LIM2P55344 RNU6-274P-201ENST00000459566 107 ntBASIC-0.88□□□□□ -2.55
LIM2P55344 U7.3-201ENST00000616123 62 ntBASIC-0.88□□□□□ -2.55
LIM2P55344 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.89□□□□□ -2.55
LIM2P55344 AP000533.3-201ENST00000447704 118 ntBASIC-0.89□□□□□ -2.55
LIM2P55344 AL691482.2-201ENST00000457453 84 ntBASIC-0.89□□□□□ -2.55
LIM2P55344 RNU6-109P-201ENST00000516364 107 ntBASIC-0.89□□□□□ -2.55
LIM2P55344 RNA5SP470-201ENST00000516463 106 ntBASIC-0.89□□□□□ -2.55
LIM2P55344 RNU6-589P-201ENST00000516485 107 ntBASIC-0.89□□□□□ -2.55
LIM2P55344 RNU6-184P-201ENST00000516514 107 ntBASIC-0.89□□□□□ -2.55
LIM2P55344 RNU6-158P-201ENST00000517104 100 ntBASIC-0.89□□□□□ -2.55
LIM2P55344 MIR3657-201ENST00000584818 117 ntBASIC-0.89□□□□□ -2.55
LIM2P55344 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.9□□□□□ -2.55
LIM2P55344 MIR6129-201ENST00000616087 109 ntBASIC-0.9□□□□□ -2.55
LIM2P55344 AC090617.8-201ENST00000623339 167 ntBASIC-0.9□□□□□ -2.55
LIM2P55344 RNU6-208P-201ENST00000362431 107 ntBASIC-0.91□□□□□ -2.56
LIM2P55344 RNU6-766P-201ENST00000362478 107 ntBASIC-0.91□□□□□ -2.56
LIM2P55344 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.91□□□□□ -2.56
LIM2P55344 RNU6-905P-201ENST00000384434 107 ntBASIC-0.91□□□□□ -2.56
LIM2P55344 SNORA19-201ENST00000384737 128 ntBASIC-0.91□□□□□ -2.56
LIM2P55344 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.91□□□□□ -2.56
LIM2P55344 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.92□□□□□ -2.56
LIM2P55344 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.92□□□□□ -2.56
LIM2P55344 MIR203A-201ENST00000384836 110 ntBASIC-0.92□□□□□ -2.56
LIM2P55344 MIR517B-201ENST00000385102 67 ntBASIC-0.92□□□□□ -2.56
LIM2P55344 RNU6-162P-201ENST00000516228 103 ntBASIC-0.92□□□□□ -2.56
LIM2P55344 RNU6-752P-201ENST00000516376 102 ntBASIC-0.92□□□□□ -2.56
LIM2P55344 RNA5SP147-201ENST00000516493 109 ntBASIC-0.92□□□□□ -2.56
LIM2P55344 AL353803.5-201ENST00000599815 141 ntBASIC-0.92□□□□□ -2.56
LIM2P55344 SNORA33.1-201ENST00000364957 130 ntBASIC-0.93□□□□□ -2.56
LIM2P55344 RNU6-22P-201ENST00000384355 107 ntBASIC-0.93□□□□□ -2.56
LIM2P55344 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.93□□□□□ -2.56
LIM2P55344 MT-TR-201ENST00000387439 65 ntBASIC-0.93□□□□□ -2.56
LIM2P55344 MIR548M-201ENST00000408260 86 ntBASIC-0.93□□□□□ -2.56
LIM2P55344 AL450471.1-201ENST00000447509 127 ntBASIC-0.93□□□□□ -2.56
LIM2P55344 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.93□□□□□ -2.56
LIM2P55344 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-0.93□□□□□ -2.56
LIM2P55344 MTATP8P2-201ENST00000435212 202 ntBASIC-0.94□□□□□ -2.56
LIM2P55344 SNORD18.2-201ENST00000459604 70 ntBASIC-0.94□□□□□ -2.56
LIM2P55344 RNU7-153P-201ENST00000516455 62 ntBASIC-0.94□□□□□ -2.56
LIM2P55344 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.94□□□□□ -2.56
LIM2P55344 MIR2052-201ENST00000636055 55 ntBASIC-0.94□□□□□ -2.56
LIM2P55344 MIR521-2-201ENST00000384818 87 ntBASIC-0.95□□□□□ -2.56
LIM2P55344 CYP3A54P-201ENST00000566950 75 ntBASIC-0.95□□□□□ -2.56
LIM2P55344 RNU6-681P-201ENST00000364012 104 ntBASIC-0.96□□□□□ -2.56
LIM2P55344 MIR519C-201ENST00000385053 87 ntBASIC-0.96□□□□□ -2.56
LIM2P55344 MIR1255B2-201ENST00000408618 67 ntBASIC-0.96□□□□□ -2.56
LIM2P55344 RNU6-479P-201ENST00000516348 105 ntBASIC-0.96□□□□□ -2.56
LIM2P55344 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.96□□□□□ -2.56
LIM2P55344 MIR4464-201ENST00000580818 92 ntBASIC-0.96□□□□□ -2.56
LIM2P55344 MIR6739-201ENST00000622461 75 ntBASIC-0.96□□□□□ -2.56
LIM2P55344 RNU6-340P-201ENST00000364005 107 ntBASIC-0.97□□□□□ -2.56
LIM2P55344 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.97□□□□□ -2.56
LIM2P55344 MIR124-2-201ENST00000385081 109 ntBASIC-0.97□□□□□ -2.56
LIM2P55344 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.98□□□□□ -2.57
LIM2P55344 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.98□□□□□ -2.57
LIM2P55344 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.98□□□□□ -2.57
LIM2P55344 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.98□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms