Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 MTATP6P29-201ENST00000415057 132 ntBASIC-1.66□□□□□ -2.68
MDH1P40925 RNU6-388P-201ENST00000517012 105 ntBASIC-1.66□□□□□ -2.68
MDH1P40925 RNU6-389P-201ENST00000517048 105 ntBASIC-1.66□□□□□ -2.68
MDH1P40925 MIR6509-201ENST00000614603 85 ntBASIC-1.66□□□□□ -2.68
MDH1P40925 MIR4320-201ENST00000636981 65 ntBASIC-1.66□□□□□ -2.68
MDH1P40925 RNU6-824P-201ENST00000363724 104 ntBASIC-1.67□□□□□ -2.68
MDH1P40925 RNU4-61P-201ENST00000411243 107 ntBASIC-1.67□□□□□ -2.68
MDH1P40925 RNU6-772P-201ENST00000516042 105 ntBASIC-1.67□□□□□ -2.68
MDH1P40925 RNU6-706P-201ENST00000517229 104 ntBASIC-1.67□□□□□ -2.68
MDH1P40925 MIR3657-201ENST00000584818 117 ntBASIC-1.67□□□□□ -2.68
MDH1P40925 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.67□□□□□ -2.68
MDH1P40925 RNU4-32P-201ENST00000363404 141 ntBASIC-1.68□□□□□ -2.68
MDH1P40925 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.68□□□□□ -2.68
MDH1P40925 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.68□□□□□ -2.68
MDH1P40925 SNORA18.5-201ENST00000516616 101 ntBASIC-1.68□□□□□ -2.68
MDH1P40925 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.68□□□□□ -2.68
MDH1P40925 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.69□□□□□ -2.68
MDH1P40925 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.69□□□□□ -2.68
MDH1P40925 MIR527-201ENST00000385244 85 ntBASIC-1.69□□□□□ -2.68
MDH1P40925 RNU6-576P-201ENST00000390854 102 ntBASIC-1.69□□□□□ -2.68
MDH1P40925 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.69□□□□□ -2.68
MDH1P40925 RNA5SP26-201ENST00000362406 119 ntBASIC-1.7□□□□□ -2.68
MDH1P40925 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.7□□□□□ -2.68
MDH1P40925 SNORA2.1-201ENST00000363089 137 ntBASIC-1.7□□□□□ -2.68
MDH1P40925 MIR548I1-201ENST00000408810 149 ntBASIC-1.7□□□□□ -2.68
MDH1P40925 RNA5SP272-201ENST00000516095 111 ntBASIC-1.7□□□□□ -2.68
MDH1P40925 RNU6-426P-201ENST00000516464 97 ntBASIC-1.7□□□□□ -2.68
MDH1P40925 RNU6-182P-201ENST00000516970 105 ntBASIC-1.7□□□□□ -2.68
MDH1P40925 MIR889-201ENST00000401280 79 ntBASIC-1.71□□□□□ -2.68
MDH1P40925 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.71□□□□□ -2.68
MDH1P40925 MIR5009-201ENST00000578736 100 ntBASIC-1.71□□□□□ -2.68
MDH1P40925 AL353621.2-201ENST00000605340 133 ntBASIC-1.71□□□□□ -2.68
MDH1P40925 RNA5SP331-201ENST00000364986 107 ntBASIC-1.72□□□□□ -2.68
MDH1P40925 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.72□□□□□ -2.68
MDH1P40925 MIR519A2-201ENST00000384990 87 ntBASIC-1.72□□□□□ -2.68
MDH1P40925 MIR507-201ENST00000385234 94 ntBASIC-1.73□□□□□ -2.69
MDH1P40925 MT-TG-201ENST00000387429 68 ntBASIC-1.73□□□□□ -2.69
MDH1P40925 SNORA40-201ENST00000388090 126 ntBASIC-1.73□□□□□ -2.69
MDH1P40925 MTND4LP9-201ENST00000427694 174 ntBASIC-1.73□□□□□ -2.69
MDH1P40925 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.73□□□□□ -2.69
MDH1P40925 RNU5F-1-201ENST00000362507 117 ntBASIC-1.74□□□□□ -2.69
MDH1P40925 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.74□□□□□ -2.69
MDH1P40925 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.74□□□□□ -2.69
MDH1P40925 AL691482.2-201ENST00000457453 84 ntBASIC-1.74□□□□□ -2.69
MDH1P40925 AL353691.2-201ENST00000443795 59 ntBASIC-1.75□□□□□ -2.69
MDH1P40925 AP002795.1-201ENST00000534879 84 ntBASIC-1.75□□□□□ -2.69
MDH1P40925 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.75□□□□□ -2.69
MDH1P40925 AC091912.2-201ENST00000624798 167 ntBASIC-1.75□□□□□ -2.69
MDH1P40925 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.76□□□□□ -2.69
MDH1P40925 RNU6-518P-201ENST00000516056 96 ntBASIC-1.76□□□□□ -2.69
MDH1P40925 RNU7-154P-201ENST00000516194 62 ntBASIC-1.76□□□□□ -2.69
MDH1P40925 AC138207.3-201ENST00000585289 166 ntBASIC-1.76□□□□□ -2.69
MDH1P40925 MIR6874-201ENST00000635894 71 ntBASIC-1.76□□□□□ -2.69
MDH1P40925 RNU6-80P-201ENST00000384195 107 ntBASIC-1.77□□□□□ -2.69
MDH1P40925 MIR521-2-201ENST00000384818 87 ntBASIC-1.77□□□□□ -2.69
MDH1P40925 SNX3P1X-201ENST00000414887 175 ntBASIC-1.77□□□□□ -2.69
MDH1P40925 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.77□□□□□ -2.69
MDH1P40925 MIR548AG1-201ENST00000579932 66 ntBASIC-1.77□□□□□ -2.69
MDH1P40925 AL627230.5-201ENST00000619807 58 ntBASIC-1.77□□□□□ -2.69
MDH1P40925 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.78□□□□□ -2.69
MDH1P40925 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.78□□□□□ -2.69
MDH1P40925 SNORA19.1-201ENST00000410656 129 ntBASIC-1.78□□□□□ -2.69
MDH1P40925 RNU7-88P-201ENST00000458752 63 ntBASIC-1.78□□□□□ -2.69
MDH1P40925 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.78□□□□□ -2.69
MDH1P40925 MTND5P41-201ENST00000517498 206 ntBASIC-1.78□□□□□ -2.69
MDH1P40925 MIR4777-201ENST00000583710 86 ntBASIC-1.78□□□□□ -2.69
MDH1P40925 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.79□□□□□ -2.7
MDH1P40925 HLA-S-202ENST00000425174 53 ntBASIC-1.79□□□□□ -2.7
MDH1P40925 RNU6-1211P-201ENST00000459179 105 ntBASIC-1.79□□□□□ -2.7
MDH1P40925 RNU6-732P-201ENST00000516033 103 ntBASIC-1.79□□□□□ -2.7
MDH1P40925 RNU6-795P-201ENST00000516323 103 ntBASIC-1.79□□□□□ -2.7
MDH1P40925 SNORD19-201ENST00000391191 68 ntBASIC-1.8□□□□□ -2.7
MDH1P40925 MIR4520-1-201ENST00000582609 70 ntBASIC-1.8□□□□□ -2.7
MDH1P40925 U6.81-201ENST00000612550 106 ntBASIC-1.8□□□□□ -2.7
MDH1P40925 MIR198-201ENST00000637333 62 ntBASIC-1.8□□□□□ -2.7
MDH1P40925 U7.5-201ENST00000517224 61 ntBASIC-1.81□□□□□ -2.7
MDH1P40925 AC026421.1-201ENST00000519101 163 ntBASIC-1.81□□□□□ -2.7
MDH1P40925 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.82□□□□□ -2.7
MDH1P40925 RNU6-164P-201ENST00000364604 103 ntBASIC-1.82□□□□□ -2.7
MDH1P40925 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.82□□□□□ -2.7
MDH1P40925 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.82□□□□□ -2.7
MDH1P40925 RPL35AP4-201ENST00000412007 102 ntBASIC-1.82□□□□□ -2.7
MDH1P40925 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.82□□□□□ -2.7
MDH1P40925 MIR5591-201ENST00000578248 65 ntBASIC-1.82□□□□□ -2.7
MDH1P40925 AC012531.4-201ENST00000616509 177 ntBASIC-1.82□□□□□ -2.7
MDH1P40925 RNU6-246P-201ENST00000384702 107 ntBASIC-1.83□□□□□ -2.7
MDH1P40925 MIR548A3-201ENST00000385297 97 ntBASIC-1.83□□□□□ -2.7
MDH1P40925 RNU6-972P-201ENST00000391208 107 ntBASIC-1.83□□□□□ -2.7
MDH1P40925 AL078595.1-201ENST00000404458 226 ntBASIC-1.83□□□□□ -2.7
MDH1P40925 MIR6739-201ENST00000622461 75 ntBASIC-1.83□□□□□ -2.7
MDH1P40925 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.84□□□□□ -2.7
MDH1P40925 RNU7-107P-201ENST00000459121 61 ntBASIC-1.84□□□□□ -2.7
MDH1P40925 MIR6129-201ENST00000616087 109 ntBASIC-1.84□□□□□ -2.7
MDH1P40925 MIR6502-201ENST00000617296 76 ntBASIC-1.84□□□□□ -2.7
MDH1P40925 MIR5683-201ENST00000636514 76 ntBASIC-1.84□□□□□ -2.7
MDH1P40925 RNU6-886P-201ENST00000384319 105 ntBASIC-1.85□□□□□ -2.71
MDH1P40925 U6.95-201ENST00000636931 70 ntBASIC-1.85□□□□□ -2.71
MDH1P40925 MIR3914-2-201ENST00000637339 95 ntBASIC-1.85□□□□□ -2.71
MDH1P40925 RNU6-774P-201ENST00000363238 107 ntBASIC-1.86□□□□□ -2.71
MDH1P40925 MIR4490-201ENST00000582647 84 ntBASIC-1.86□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 185.7 ms