Protein–RNA interactions for Protein: P30531

SLC6A1, Sodium- and chloride-dependent GABA transporter 1, humanhuman

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1P30531 SNORA2.1-201ENST00000363089 137 ntBASIC-1.38□□□□□ -2.63
SLC6A1P30531 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.38□□□□□ -2.63
SLC6A1P30531 MIR601-201ENST00000385256 79 ntBASIC-1.38□□□□□ -2.63
SLC6A1P30531 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.38□□□□□ -2.63
SLC6A1P30531 RNU6-795P-201ENST00000516323 103 ntBASIC-1.38□□□□□ -2.63
SLC6A1P30531 RNU6-388P-201ENST00000517012 105 ntBASIC-1.38□□□□□ -2.63
SLC6A1P30531 RNU6-389P-201ENST00000517048 105 ntBASIC-1.38□□□□□ -2.63
SLC6A1P30531 MIR3657-201ENST00000584818 117 ntBASIC-1.38□□□□□ -2.63
SLC6A1P30531 RNU5F-1-201ENST00000362507 117 ntBASIC-1.39□□□□□ -2.63
SLC6A1P30531 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.39□□□□□ -2.63
SLC6A1P30531 RNU6-463P-201ENST00000384340 107 ntBASIC-1.39□□□□□ -2.63
SLC6A1P30531 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.39□□□□□ -2.63
SLC6A1P30531 SCARNA15.1-201ENST00000516384 125 ntBASIC-1.39□□□□□ -2.63
SLC6A1P30531 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.39□□□□□ -2.63
SLC6A1P30531 AC012531.4-201ENST00000616509 177 ntBASIC-1.39□□□□□ -2.63
SLC6A1P30531 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.4□□□□□ -2.63
SLC6A1P30531 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.4□□□□□ -2.63
SLC6A1P30531 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.41□□□□□ -2.64
SLC6A1P30531 RNU7-107P-201ENST00000459121 61 ntBASIC-1.41□□□□□ -2.64
SLC6A1P30531 CYP3A54P-201ENST00000566950 75 ntBASIC-1.41□□□□□ -2.64
SLC6A1P30531 RNU6-924P-201ENST00000362926 108 ntBASIC-1.42□□□□□ -2.64
SLC6A1P30531 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.42□□□□□ -2.64
SLC6A1P30531 RNU6-746P-201ENST00000384112 109 ntBASIC-1.43□□□□□ -2.64
SLC6A1P30531 AL691482.2-201ENST00000457453 84 ntBASIC-1.43□□□□□ -2.64
SLC6A1P30531 RNU7-134P-201ENST00000458997 64 ntBASIC-1.43□□□□□ -2.64
SLC6A1P30531 RNU6-706P-201ENST00000517229 104 ntBASIC-1.43□□□□□ -2.64
SLC6A1P30531 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.43□□□□□ -2.64
SLC6A1P30531 MIR198-201ENST00000637333 62 ntBASIC-1.43□□□□□ -2.64
SLC6A1P30531 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.44□□□□□ -2.64
SLC6A1P30531 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.44□□□□□ -2.64
SLC6A1P30531 RNU6-694P-201ENST00000364071 147 ntBASIC-1.44□□□□□ -2.64
SLC6A1P30531 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.44□□□□□ -2.64
SLC6A1P30531 SNORA40-201ENST00000388090 126 ntBASIC-1.44□□□□□ -2.64
SLC6A1P30531 SNORA26.4-201ENST00000391188 123 ntBASIC-1.44□□□□□ -2.64
SLC6A1P30531 SNORD33.1-201ENST00000516213 88 ntBASIC-1.44□□□□□ -2.64
SLC6A1P30531 U6.81-201ENST00000612550 106 ntBASIC-1.44□□□□□ -2.64
SLC6A1P30531 SNORD63.1-201ENST00000516178 80 ntBASIC-1.45□□□□□ -2.64
SLC6A1P30531 AL353621.2-201ENST00000605340 133 ntBASIC-1.45□□□□□ -2.64
SLC6A1P30531 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.45□□□□□ -2.64
SLC6A1P30531 MIR3914-2-201ENST00000637339 95 ntBASIC-1.45□□□□□ -2.64
SLC6A1P30531 SNORD58A-201ENST00000383875 65 ntBASIC-1.46□□□□□ -2.64
SLC6A1P30531 RNU6-257P-201ENST00000410238 98 ntBASIC-1.46□□□□□ -2.64
SLC6A1P30531 RNU6-479P-201ENST00000516348 105 ntBASIC-1.46□□□□□ -2.64
SLC6A1P30531 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.46□□□□□ -2.64
SLC6A1P30531 SNORD115-33-201ENST00000363723 82 ntBASIC-1.47□□□□□ -2.64
SLC6A1P30531 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.47□□□□□ -2.64
SLC6A1P30531 MIR521-2-201ENST00000384818 87 ntBASIC-1.47□□□□□ -2.64
SLC6A1P30531 RNU6-1211P-201ENST00000459179 105 ntBASIC-1.47□□□□□ -2.64
SLC6A1P30531 RNU7-154P-201ENST00000516194 62 ntBASIC-1.47□□□□□ -2.64
SLC6A1P30531 AC026421.1-201ENST00000519101 163 ntBASIC-1.47□□□□□ -2.64
SLC6A1P30531 MIR4723-201ENST00000585070 81 ntBASIC-1.47□□□□□ -2.64
SLC6A1P30531 AC132825.6-201ENST00000638861 357 ntBASIC-1.47□□□□□ -2.64
SLC6A1P30531 MIR29B1-201ENST00000385015 81 ntBASIC-1.48□□□□□ -2.65
SLC6A1P30531 RNU6-972P-201ENST00000391208 107 ntBASIC-1.48□□□□□ -2.65
SLC6A1P30531 MIR8485-201ENST00000401372 91 ntBASIC-1.48□□□□□ -2.65
SLC6A1P30531 RNU6-887P-201ENST00000410660 100 ntBASIC-1.48□□□□□ -2.65
SLC6A1P30531 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.49□□□□□ -2.65
SLC6A1P30531 MT-TG-201ENST00000387429 68 ntBASIC-1.49□□□□□ -2.65
SLC6A1P30531 SNORA19.1-201ENST00000410656 129 ntBASIC-1.49□□□□□ -2.65
SLC6A1P30531 RNA5SP461-201ENST00000516451 104 ntBASIC-1.49□□□□□ -2.65
SLC6A1P30531 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.49□□□□□ -2.65
SLC6A1P30531 MIR4796-201ENST00000580742 81 ntBASIC-1.49□□□□□ -2.65
SLC6A1P30531 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.5□□□□□ -2.65
SLC6A1P30531 RNU6-886P-201ENST00000384319 105 ntBASIC-1.5□□□□□ -2.65
SLC6A1P30531 MIR519A2-201ENST00000384990 87 ntBASIC-1.5□□□□□ -2.65
SLC6A1P30531 MIR548A3-201ENST00000385297 97 ntBASIC-1.5□□□□□ -2.65
SLC6A1P30531 RNU6-182P-201ENST00000516970 105 ntBASIC-1.5□□□□□ -2.65
SLC6A1P30531 MIR6818-201ENST00000621576 65 ntBASIC-1.5□□□□□ -2.65
SLC6A1P30531 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.5□□□□□ -2.65
SLC6A1P30531 SNORD115-22-201ENST00000364456 82 ntBASIC-1.51□□□□□ -2.65
SLC6A1P30531 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.51□□□□□ -2.65
SLC6A1P30531 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.51□□□□□ -2.65
SLC6A1P30531 RNU6-518P-201ENST00000516056 96 ntBASIC-1.51□□□□□ -2.65
SLC6A1P30531 SCARNA23-201ENST00000516060 130 ntBASIC-1.51□□□□□ -2.65
SLC6A1P30531 RNU6-971P-201ENST00000516920 106 ntBASIC-1.51□□□□□ -2.65
SLC6A1P30531 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.51□□□□□ -2.65
SLC6A1P30531 MIR6739-201ENST00000622461 75 ntBASIC-1.51□□□□□ -2.65
SLC6A1P30531 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.52□□□□□ -2.65
SLC6A1P30531 RNU7-200P-201ENST00000516105 62 ntBASIC-1.52□□□□□ -2.65
SLC6A1P30531 RNU6-904P-201ENST00000516206 101 ntBASIC-1.52□□□□□ -2.65
SLC6A1P30531 AC138207.3-201ENST00000585289 166 ntBASIC-1.52□□□□□ -2.65
SLC6A1P30531 U6.95-201ENST00000636931 70 ntBASIC-1.52□□□□□ -2.65
SLC6A1P30531 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.53□□□□□ -2.65
SLC6A1P30531 RNU2-51P-201ENST00000410708 197 ntBASIC-1.53□□□□□ -2.65
SLC6A1P30531 HLA-S-202ENST00000425174 53 ntBASIC-1.53□□□□□ -2.65
SLC6A1P30531 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.53□□□□□ -2.65
SLC6A1P30531 SNORD116-10-201ENST00000363791 102 ntBASIC-1.54□□□□□ -2.66
SLC6A1P30531 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.54□□□□□ -2.66
SLC6A1P30531 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.54□□□□□ -2.66
SLC6A1P30531 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.54□□□□□ -2.66
SLC6A1P30531 RNU4-61P-201ENST00000411243 107 ntBASIC-1.55□□□□□ -2.66
SLC6A1P30531 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.55□□□□□ -2.66
SLC6A1P30531 RNU6-752P-201ENST00000516376 102 ntBASIC-1.55□□□□□ -2.66
SLC6A1P30531 RNA5SP26-201ENST00000362406 119 ntBASIC-1.56□□□□□ -2.66
SLC6A1P30531 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.56□□□□□ -2.66
SLC6A1P30531 RNU6-80P-201ENST00000384195 107 ntBASIC-1.56□□□□□ -2.66
SLC6A1P30531 RNU6-576P-201ENST00000390854 102 ntBASIC-1.56□□□□□ -2.66
SLC6A1P30531 AL353691.2-201ENST00000443795 59 ntBASIC-1.56□□□□□ -2.66
SLC6A1P30531 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.56□□□□□ -2.66
SLC6A1P30531 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.57□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms