Protein–RNA interactions for Protein: A6NHR9

SMCHD1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1A6NHR9 SCARNA18B-201ENST00000458806 135 ntBASIC-0.02□□□□□ -2.41
SMCHD1A6NHR9 MIR4752-201ENST00000579672 72 ntBASIC-0.02□□□□□ -2.41
SMCHD1A6NHR9 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.03□□□□□ -2.41
SMCHD1A6NHR9 AC097510.1-201ENST00000510945 133 ntBASIC-0.03□□□□□ -2.41
SMCHD1A6NHR9 SNORA49-201ENST00000386157 136 ntBASIC-0.03□□□□□ -2.41
SMCHD1A6NHR9 Y_RNA.81-201ENST00000362997 102 ntBASIC-0.04□□□□□ -2.42
SMCHD1A6NHR9 SNORD115-22-201ENST00000364456 82 ntBASIC-0.04□□□□□ -2.42
SMCHD1A6NHR9 MIR488-201ENST00000365739 83 ntBASIC-0.04□□□□□ -2.42
SMCHD1A6NHR9 RNU6-260P-201ENST00000384092 107 ntBASIC-0.04□□□□□ -2.42
SMCHD1A6NHR9 RNU6-127P-201ENST00000390897 107 ntBASIC-0.04□□□□□ -2.42
SMCHD1A6NHR9 AC096531.1-201ENST00000419107 107 ntBASIC-0.04□□□□□ -2.42
SMCHD1A6NHR9 MIR548AE1-201ENST00000583292 70 ntBASIC-0.04□□□□□ -2.42
SMCHD1A6NHR9 SNORA25.13-201ENST00000516395 103 ntBASIC-0.04□□□□□ -2.42
SMCHD1A6NHR9 NAMPTP3-201ENST00000569273 224 ntBASIC-0.04□□□□□ -2.42
SMCHD1A6NHR9 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.05□□□□□ -2.42
SMCHD1A6NHR9 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.05□□□□□ -2.42
SMCHD1A6NHR9 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.05□□□□□ -2.42
SMCHD1A6NHR9 MIR4802-201ENST00000581881 80 ntBASIC-0.05□□□□□ -2.42
SMCHD1A6NHR9 Y_RNA.593-201ENST00000410292 98 ntBASIC-0.06□□□□□ -2.42
SMCHD1A6NHR9 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.06□□□□□ -2.42
SMCHD1A6NHR9 RNU6-820P-201ENST00000384273 107 ntBASIC-0.06□□□□□ -2.42
SMCHD1A6NHR9 MIR1255A-201ENST00000408338 113 ntBASIC-0.06□□□□□ -2.42
SMCHD1A6NHR9 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.06□□□□□ -2.42
SMCHD1A6NHR9 AC244090.1-201ENST00000441884 93 ntBASIC-0.06□□□□□ -2.42
SMCHD1A6NHR9 RNU7-153P-201ENST00000516455 62 ntBASIC-0.06□□□□□ -2.42
SMCHD1A6NHR9 Y_RNA.73-201ENST00000362910 113 ntBASIC-0.07□□□□□ -2.42
SMCHD1A6NHR9 SNORA18.1-201ENST00000363418 128 ntBASIC-0.07□□□□□ -2.42
SMCHD1A6NHR9 RNU6-219P-201ENST00000364728 107 ntBASIC-0.07□□□□□ -2.42
SMCHD1A6NHR9 RNA5SP173-201ENST00000364857 136 ntBASIC-0.07□□□□□ -2.42
SMCHD1A6NHR9 RNU6-1152P-201ENST00000384576 107 ntBASIC-0.07□□□□□ -2.42
SMCHD1A6NHR9 RNU6-340P-201ENST00000364005 107 ntBASIC-0.08□□□□□ -2.42
SMCHD1A6NHR9 RNU6-1134P-201ENST00000365156 101 ntBASIC-0.08□□□□□ -2.42
SMCHD1A6NHR9 RNU6-592P-201ENST00000411333 103 ntBASIC-0.08□□□□□ -2.42
SMCHD1A6NHR9 AC104996.3-201ENST00000590718 94 ntBASIC-0.08□□□□□ -2.42
SMCHD1A6NHR9 Y_RNA.17-201ENST00000362433 111 ntBASIC-0.08□□□□□ -2.42
SMCHD1A6NHR9 RNU6-824P-201ENST00000363724 104 ntBASIC-0.08□□□□□ -2.42
SMCHD1A6NHR9 AC244250.2-201ENST00000418731 148 ntBASIC-0.08□□□□□ -2.42
SMCHD1A6NHR9 snoU13.13-201ENST00000458842 104 ntBASIC-0.08□□□□□ -2.42
SMCHD1A6NHR9 SNORD42B-201ENST00000458893 67 ntBASIC-0.08□□□□□ -2.42
SMCHD1A6NHR9 RNU6-1255P-201ENST00000363434 112 ntBASIC-0.09□□□□□ -2.42
SMCHD1A6NHR9 MIR652-201ENST00000385278 98 ntBASIC-0.09□□□□□ -2.42
SMCHD1A6NHR9 RN7SL660P-201ENST00000614852 299 ntBASIC-0.09□□□□□ -2.42
SMCHD1A6NHR9 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.09□□□□□ -2.42
SMCHD1A6NHR9 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
SMCHD1A6NHR9 RNU6-303P-201ENST00000517091 106 ntBASIC-0.09□□□□□ -2.42
SMCHD1A6NHR9 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.1□□□□□ -2.43
SMCHD1A6NHR9 AL450471.1-201ENST00000447509 127 ntBASIC-0.11□□□□□ -2.43
SMCHD1A6NHR9 RNU6-752P-201ENST00000516376 102 ntBASIC-0.11□□□□□ -2.43
SMCHD1A6NHR9 MIR1302-4-201ENST00000408701 150 ntBASIC-0.11□□□□□ -2.43
SMCHD1A6NHR9 AC022137.1-201ENST00000483735 151 ntBASIC-0.11□□□□□ -2.43
SMCHD1A6NHR9 MIR4768-201ENST00000585270 74 ntBASIC-0.11□□□□□ -2.43
SMCHD1A6NHR9 RNU6-382P-201ENST00000365181 106 ntBASIC-0.13□□□□□ -2.43
SMCHD1A6NHR9 RNU6-502P-201ENST00000362419 108 ntBASIC-0.13□□□□□ -2.43
SMCHD1A6NHR9 AP000676.1-201ENST00000533307 52 ntBASIC-0.13□□□□□ -2.43
SMCHD1A6NHR9 MIR4666B-201ENST00000578142 81 ntBASIC-0.13□□□□□ -2.43
SMCHD1A6NHR9 MIR6514-201ENST00000622549 70 ntBASIC-0.13□□□□□ -2.43
SMCHD1A6NHR9 MIR3666-201ENST00000607845 111 ntBASIC-0.14□□□□□ -2.43
SMCHD1A6NHR9 RNU6-787P-201ENST00000384032 107 ntBASIC-0.14□□□□□ -2.43
SMCHD1A6NHR9 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.14□□□□□ -2.43
SMCHD1A6NHR9 MIR4263-201ENST00000584745 83 ntBASIC-0.14□□□□□ -2.43
SMCHD1A6NHR9 AC006254.2-201ENST00000603259 279 ntBASIC-0.14□□□□□ -2.43
SMCHD1A6NHR9 FGF7P7-201ENST00000514120 227 ntBASIC-0.15□□□□□ -2.43
SMCHD1A6NHR9 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.15□□□□□ -2.43
SMCHD1A6NHR9 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.15□□□□□ -2.43
SMCHD1A6NHR9 RNU6-1276P-201ENST00000365372 104 ntBASIC-0.16□□□□□ -2.43
SMCHD1A6NHR9 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.16□□□□□ -2.43
SMCHD1A6NHR9 RNU6-337P-201ENST00000391243 106 ntBASIC-0.16□□□□□ -2.43
SMCHD1A6NHR9 MIR4773-1-201ENST00000637203 78 ntBASIC-0.16□□□□□ -2.43
SMCHD1A6NHR9 SNORA32.3-201ENST00000384772 121 ntBASIC-0.16□□□□□ -2.44
SMCHD1A6NHR9 MIR1265-201ENST00000408444 86 ntBASIC-0.16□□□□□ -2.44
SMCHD1A6NHR9 RNA5SP147-201ENST00000516493 109 ntBASIC-0.16□□□□□ -2.44
SMCHD1A6NHR9 AP001180.6-201ENST00000584918 159 ntBASIC-0.16□□□□□ -2.44
SMCHD1A6NHR9 MIR6773-201ENST00000612812 74 ntBASIC-0.16□□□□□ -2.44
SMCHD1A6NHR9 RNU6-478P-201ENST00000363904 110 ntBASIC-0.17□□□□□ -2.44
SMCHD1A6NHR9 Y_RNA.388-201ENST00000383919 113 ntBASIC-0.17□□□□□ -2.44
SMCHD1A6NHR9 SNORD4A-201ENST00000459174 72 ntBASIC-0.17□□□□□ -2.44
SMCHD1A6NHR9 MIR548BB-201ENST00000626714 66 ntBASIC-0.17□□□□□ -2.44
SMCHD1A6NHR9 MIR521-2-201ENST00000384818 87 ntBASIC-0.18□□□□□ -2.44
SMCHD1A6NHR9 SNORA26.2-201ENST00000390922 122 ntBASIC-0.18□□□□□ -2.44
SMCHD1A6NHR9 RNA5SP300-201ENST00000391197 107 ntBASIC-0.18□□□□□ -2.44
SMCHD1A6NHR9 CYP3A54P-201ENST00000566950 75 ntBASIC-0.18□□□□□ -2.44
SMCHD1A6NHR9 RNU6-455P-201ENST00000384681 107 ntBASIC-0.18□□□□□ -2.44
SMCHD1A6NHR9 SNORD56B-201ENST00000384713 71 ntBASIC-0.18□□□□□ -2.44
SMCHD1A6NHR9 MIR154-201ENST00000385243 84 ntBASIC-0.18□□□□□ -2.44
SMCHD1A6NHR9 AC104692.1-201ENST00000472406 90 ntBASIC-0.18□□□□□ -2.44
SMCHD1A6NHR9 RNU6-762P-201ENST00000517107 102 ntBASIC-0.18□□□□□ -2.44
SMCHD1A6NHR9 RNA5SP170-201ENST00000517150 101 ntBASIC-0.18□□□□□ -2.44
SMCHD1A6NHR9 MIR5588-201ENST00000581890 63 ntBASIC-0.18□□□□□ -2.44
SMCHD1A6NHR9 MIR214-201ENST00000385214 110 ntBASIC-0.19□□□□□ -2.44
SMCHD1A6NHR9 AC093729.1-201ENST00000513074 128 ntBASIC-0.19□□□□□ -2.44
SMCHD1A6NHR9 RNU6-557P-201ENST00000516842 110 ntBASIC-0.19□□□□□ -2.44
SMCHD1A6NHR9 MIR6854-201ENST00000614935 69 ntBASIC-0.19□□□□□ -2.44
SMCHD1A6NHR9 SNORD114-11-201ENST00000363738 75 ntBASIC-0.2□□□□□ -2.44
SMCHD1A6NHR9 MIR4645-201ENST00000583158 77 ntBASIC-0.2□□□□□ -2.44
SMCHD1A6NHR9 AC062037.1-201ENST00000605302 128 ntBASIC-0.2□□□□□ -2.44
SMCHD1A6NHR9 RNU6-302P-201ENST00000365249 107 ntBASIC-0.2□□□□□ -2.44
SMCHD1A6NHR9 SNORD14C-201ENST00000365382 88 ntBASIC-0.2□□□□□ -2.44
SMCHD1A6NHR9 RNA5SP25-201ENST00000410815 110 ntBASIC-0.2□□□□□ -2.44
SMCHD1A6NHR9 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.21□□□□□ -2.44
SMCHD1A6NHR9 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.21□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 217.5 ms