Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 RNU6-640P-201ENST00000363693 105 ntBASIC-0.54□□□□□ -2.5
TRBV4-1A0A0J9YWV2 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.54□□□□□ -2.5
TRBV4-1A0A0J9YWV2 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.54□□□□□ -2.5
TRBV4-1A0A0J9YWV2 RNU6-337P-201ENST00000391243 106 ntBASIC-0.54□□□□□ -2.5
TRBV4-1A0A0J9YWV2 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.54□□□□□ -2.5
TRBV4-1A0A0J9YWV2 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.54□□□□□ -2.5
TRBV4-1A0A0J9YWV2 RNU6-274P-201ENST00000459566 107 ntBASIC-0.54□□□□□ -2.5
TRBV4-1A0A0J9YWV2 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.54□□□□□ -2.5
TRBV4-1A0A0J9YWV2 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.54□□□□□ -2.5
TRBV4-1A0A0J9YWV2 U2.22-201ENST00000636441 106 ntBASIC-0.54□□□□□ -2.5
TRBV4-1A0A0J9YWV2 SNORD116-22-201ENST00000384430 92 ntBASIC-0.55□□□□□ -2.5
TRBV4-1A0A0J9YWV2 RNU6-905P-201ENST00000384434 107 ntBASIC-0.55□□□□□ -2.5
TRBV4-1A0A0J9YWV2 MIRLET7B-201ENST00000385140 83 ntBASIC-0.55□□□□□ -2.5
TRBV4-1A0A0J9YWV2 AL450471.1-201ENST00000447509 127 ntBASIC-0.55□□□□□ -2.5
TRBV4-1A0A0J9YWV2 MIR4432-201ENST00000581823 84 ntBASIC-0.55□□□□□ -2.5
TRBV4-1A0A0J9YWV2 MIR6509-201ENST00000614603 85 ntBASIC-0.55□□□□□ -2.5
TRBV4-1A0A0J9YWV2 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.55□□□□□ -2.5
TRBV4-1A0A0J9YWV2 SNORA2.1-201ENST00000363089 137 ntBASIC-0.56□□□□□ -2.5
TRBV4-1A0A0J9YWV2 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.56□□□□□ -2.5
TRBV4-1A0A0J9YWV2 RNU6-219P-201ENST00000364728 107 ntBASIC-0.56□□□□□ -2.5
TRBV4-1A0A0J9YWV2 RNU6-497P-201ENST00000365316 104 ntBASIC-0.56□□□□□ -2.5
TRBV4-1A0A0J9YWV2 MIR196A2-201ENST00000385189 110 ntBASIC-0.56□□□□□ -2.5
TRBV4-1A0A0J9YWV2 AL445193.1-201ENST00000441183 141 ntBASIC-0.56□□□□□ -2.5
TRBV4-1A0A0J9YWV2 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.56□□□□□ -2.5
TRBV4-1A0A0J9YWV2 AL391099.1-201ENST00000624635 187 ntBASIC-0.56□□□□□ -2.5
TRBV4-1A0A0J9YWV2 RNU6-208P-201ENST00000362431 107 ntBASIC-0.57□□□□□ -2.5
TRBV4-1A0A0J9YWV2 MIR488-201ENST00000365739 83 ntBASIC-0.57□□□□□ -2.5
TRBV4-1A0A0J9YWV2 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.57□□□□□ -2.5
TRBV4-1A0A0J9YWV2 AL691482.2-201ENST00000457453 84 ntBASIC-0.57□□□□□ -2.5
TRBV4-1A0A0J9YWV2 MIR3657-201ENST00000584818 117 ntBASIC-0.57□□□□□ -2.5
TRBV4-1A0A0J9YWV2 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.57□□□□□ -2.5
TRBV4-1A0A0J9YWV2 MIR6851-201ENST00000617060 67 ntBASIC-0.57□□□□□ -2.5
TRBV4-1A0A0J9YWV2 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.58□□□□□ -2.5
TRBV4-1A0A0J9YWV2 SNORD115-37-201ENST00000363768 82 ntBASIC-0.58□□□□□ -2.5
TRBV4-1A0A0J9YWV2 SNORD115-23-201ENST00000364461 82 ntBASIC-0.58□□□□□ -2.5
TRBV4-1A0A0J9YWV2 RNU6-44P-201ENST00000384045 107 ntBASIC-0.58□□□□□ -2.5
TRBV4-1A0A0J9YWV2 MIR7-2-201ENST00000384970 110 ntBASIC-0.58□□□□□ -2.5
TRBV4-1A0A0J9YWV2 SNORD77.2-201ENST00000391045 68 ntBASIC-0.58□□□□□ -2.5
TRBV4-1A0A0J9YWV2 RNU6-752P-201ENST00000516376 102 ntBASIC-0.58□□□□□ -2.5
TRBV4-1A0A0J9YWV2 MIR548AZ-201ENST00000616567 95 ntBASIC-0.58□□□□□ -2.5
TRBV4-1A0A0J9YWV2 uc_338.36-201ENST00000622331 158 ntBASIC-0.58□□□□□ -2.5
TRBV4-1A0A0J9YWV2 RNU6-624P-201ENST00000363411 107 ntBASIC-0.59□□□□□ -2.5
TRBV4-1A0A0J9YWV2 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.59□□□□□ -2.5
TRBV4-1A0A0J9YWV2 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.59□□□□□ -2.5
TRBV4-1A0A0J9YWV2 MIR203A-201ENST00000384836 110 ntBASIC-0.59□□□□□ -2.5
TRBV4-1A0A0J9YWV2 MIR489-201ENST00000384923 84 ntBASIC-0.59□□□□□ -2.5
TRBV4-1A0A0J9YWV2 RNU6-284P-201ENST00000411105 106 ntBASIC-0.59□□□□□ -2.5
TRBV4-1A0A0J9YWV2 AC093729.1-201ENST00000513074 128 ntBASIC-0.59□□□□□ -2.5
TRBV4-1A0A0J9YWV2 RNU6-340P-201ENST00000364005 107 ntBASIC-0.6□□□□□ -2.51
TRBV4-1A0A0J9YWV2 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.6□□□□□ -2.51
TRBV4-1A0A0J9YWV2 SNORA32.3-201ENST00000384772 121 ntBASIC-0.6□□□□□ -2.51
TRBV4-1A0A0J9YWV2 RNU6-402P-201ENST00000410678 103 ntBASIC-0.6□□□□□ -2.51
TRBV4-1A0A0J9YWV2 AC114755.3-201ENST00000481111 251 ntBASIC-0.6□□□□□ -2.51
TRBV4-1A0A0J9YWV2 AL109933.3-201ENST00000619095 188 ntBASIC-0.6□□□□□ -2.51
TRBV4-1A0A0J9YWV2 U6.96-201ENST00000636425 70 ntBASIC-0.6□□□□□ -2.51
TRBV4-1A0A0J9YWV2 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.61□□□□□ -2.51
TRBV4-1A0A0J9YWV2 RNA5SP169-201ENST00000517268 117 ntBASIC-0.61□□□□□ -2.51
TRBV4-1A0A0J9YWV2 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.61□□□□□ -2.51
TRBV4-1A0A0J9YWV2 RNU6-681P-201ENST00000364012 104 ntBASIC-0.62□□□□□ -2.51
TRBV4-1A0A0J9YWV2 RNA5SP147-201ENST00000516493 109 ntBASIC-0.62□□□□□ -2.51
TRBV4-1A0A0J9YWV2 SNORD38.3-201ENST00000516599 73 ntBASIC-0.62□□□□□ -2.51
TRBV4-1A0A0J9YWV2 RNU6-267P-201ENST00000516714 103 ntBASIC-0.62□□□□□ -2.51
TRBV4-1A0A0J9YWV2 AC140658.3-201ENST00000567603 271 ntBASIC-0.62□□□□□ -2.51
TRBV4-1A0A0J9YWV2 YWHAEP3-201ENST00000582767 121 ntBASIC-0.62□□□□□ -2.51
TRBV4-1A0A0J9YWV2 MIR5704-201ENST00000584029 77 ntBASIC-0.63□□□□□ -2.51
TRBV4-1A0A0J9YWV2 AC090617.8-201ENST00000623339 167 ntBASIC-0.63□□□□□ -2.51
TRBV4-1A0A0J9YWV2 snoR1.1-201ENST00000628177 80 ntBASIC-0.63□□□□□ -2.51
TRBV4-1A0A0J9YWV2 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.64□□□□□ -2.51
TRBV4-1A0A0J9YWV2 SNORD114-14-201ENST00000362723 75 ntBASIC-0.64□□□□□ -2.51
TRBV4-1A0A0J9YWV2 RNU6-675P-201ENST00000384236 104 ntBASIC-0.64□□□□□ -2.51
TRBV4-1A0A0J9YWV2 SNORA13-201ENST00000458790 133 ntBASIC-0.64□□□□□ -2.51
TRBV4-1A0A0J9YWV2 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.64□□□□□ -2.51
TRBV4-1A0A0J9YWV2 MIR6854-201ENST00000614935 69 ntBASIC-0.64□□□□□ -2.51
TRBV4-1A0A0J9YWV2 MIR548BB-201ENST00000626714 66 ntBASIC-0.64□□□□□ -2.51
TRBV4-1A0A0J9YWV2 RNA5SP457-201ENST00000363657 124 ntBASIC-0.65□□□□□ -2.51
TRBV4-1A0A0J9YWV2 SNORA33.1-201ENST00000364957 130 ntBASIC-0.65□□□□□ -2.51
TRBV4-1A0A0J9YWV2 RNY1P7-201ENST00000384743 110 ntBASIC-0.65□□□□□ -2.51
TRBV4-1A0A0J9YWV2 MIR204-201ENST00000385200 110 ntBASIC-0.65□□□□□ -2.51
TRBV4-1A0A0J9YWV2 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.65□□□□□ -2.51
TRBV4-1A0A0J9YWV2 RNU6-168P-201ENST00000516189 101 ntBASIC-0.65□□□□□ -2.51
TRBV4-1A0A0J9YWV2 RNA5SP285-201ENST00000516619 119 ntBASIC-0.65□□□□□ -2.51
TRBV4-1A0A0J9YWV2 RNU6-557P-201ENST00000516842 110 ntBASIC-0.65□□□□□ -2.51
TRBV4-1A0A0J9YWV2 SNORD75.1-201ENST00000408373 60 ntBASIC-0.66□□□□□ -2.52
TRBV4-1A0A0J9YWV2 RPS29P8-201ENST00000445109 171 ntBASIC-0.66□□□□□ -2.52
TRBV4-1A0A0J9YWV2 RNU6-844P-201ENST00000517175 102 ntBASIC-0.66□□□□□ -2.52
TRBV4-1A0A0J9YWV2 AP001180.6-201ENST00000584918 159 ntBASIC-0.66□□□□□ -2.52
TRBV4-1A0A0J9YWV2 MIR6739-201ENST00000622461 75 ntBASIC-0.66□□□□□ -2.52
TRBV4-1A0A0J9YWV2 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.67□□□□□ -2.52
TRBV4-1A0A0J9YWV2 MIR521-2-201ENST00000384818 87 ntBASIC-0.67□□□□□ -2.52
TRBV4-1A0A0J9YWV2 MIR8068-201ENST00000618032 68 ntBASIC-0.67□□□□□ -2.52
TRBV4-1A0A0J9YWV2 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.68□□□□□ -2.52
TRBV4-1A0A0J9YWV2 MIR518B-201ENST00000385127 83 ntBASIC-0.68□□□□□ -2.52
TRBV4-1A0A0J9YWV2 RNA5SP89-201ENST00000410300 108 ntBASIC-0.68□□□□□ -2.52
TRBV4-1A0A0J9YWV2 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.69□□□□□ -2.52
TRBV4-1A0A0J9YWV2 SNORD74.6-201ENST00000364796 70 ntBASIC-0.7□□□□□ -2.52
TRBV4-1A0A0J9YWV2 SNORA62.4-201ENST00000365504 151 ntBASIC-0.7□□□□□ -2.52
TRBV4-1A0A0J9YWV2 SNORA3B-201ENST00000391305 131 ntBASIC-0.7□□□□□ -2.52
TRBV4-1A0A0J9YWV2 RNA5SP451-201ENST00000410588 110 ntBASIC-0.7□□□□□ -2.52
TRBV4-1A0A0J9YWV2 AC021146.6-201ENST00000514659 117 ntBASIC-0.7□□□□□ -2.52
TRBV4-1A0A0J9YWV2 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.71□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 229.7 ms