Protein–RNA interactions for Protein: Q9NV64

TMEM39A, Transmembrane protein 39A, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39AQ9NV64 RNU6-54P-201ENST00000365563 107 ntBASIC1.08□□□□□ -2.24
TMEM39AQ9NV64 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.08□□□□□ -2.24
TMEM39AQ9NV64 RNU6-1015P-201ENST00000517121 99 ntBASIC1.08□□□□□ -2.24
TMEM39AQ9NV64 SNORA36.2-201ENST00000384004 127 ntBASIC1.07□□□□□ -2.24
TMEM39AQ9NV64 MT-TY-201ENST00000387409 66 ntBASIC1.07□□□□□ -2.24
TMEM39AQ9NV64 NAMPTP3-201ENST00000569273 224 ntBASIC1.07□□□□□ -2.24
TMEM39AQ9NV64 AL162376.1-201ENST00000624117 175 ntBASIC1.07□□□□□ -2.24
TMEM39AQ9NV64 RNU6-587P-201ENST00000391282 106 ntBASIC1.06□□□□□ -2.24
TMEM39AQ9NV64 AL691482.2-201ENST00000457453 84 ntBASIC1.06□□□□□ -2.24
TMEM39AQ9NV64 RNU7-24P-201ENST00000458867 62 ntBASIC1.06□□□□□ -2.24
TMEM39AQ9NV64 RNU6-687P-201ENST00000516443 89 ntBASIC1.06□□□□□ -2.24
TMEM39AQ9NV64 RNY1P8-201ENST00000383970 114 ntBASIC1.05□□□□□ -2.24
TMEM39AQ9NV64 MIR608-201ENST00000384820 100 ntBASIC1.05□□□□□ -2.24
TMEM39AQ9NV64 RNA5SP484-201ENST00000458857 111 ntBASIC1.05□□□□□ -2.24
TMEM39AQ9NV64 RNU6-752P-201ENST00000516376 102 ntBASIC1.05□□□□□ -2.24
TMEM39AQ9NV64 ACA64.5-201ENST00000516207 127 ntBASIC1.04□□□□□ -2.24
TMEM39AQ9NV64 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.04□□□□□ -2.24
TMEM39AQ9NV64 MIR4698-201ENST00000577795 80 ntBASIC1.04□□□□□ -2.24
TMEM39AQ9NV64 MIR7107-201ENST00000611489 80 ntBASIC1.04□□□□□ -2.24
TMEM39AQ9NV64 Y_RNA.30-201ENST00000362572 97 ntBASIC1.03□□□□□ -2.24
TMEM39AQ9NV64 RNU6-1241P-201ENST00000384536 107 ntBASIC1.03□□□□□ -2.24
TMEM39AQ9NV64 MIR154-201ENST00000385243 84 ntBASIC1.03□□□□□ -2.24
TMEM39AQ9NV64 RNU6-871P-201ENST00000516122 100 ntBASIC1.03□□□□□ -2.24
TMEM39AQ9NV64 AC103810.9-201ENST00000606688 112 ntBASIC1.03□□□□□ -2.24
TMEM39AQ9NV64 MIR193B-201ENST00000384907 83 ntBASIC1.02□□□□□ -2.25
TMEM39AQ9NV64 SNORD42B-201ENST00000458893 67 ntBASIC1.02□□□□□ -2.25
TMEM39AQ9NV64 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.02□□□□□ -2.25
TMEM39AQ9NV64 RNU6-1039P-201ENST00000383931 107 ntBASIC1.01□□□□□ -2.25
TMEM39AQ9NV64 MIR140-201ENST00000385282 100 ntBASIC1.01□□□□□ -2.25
TMEM39AQ9NV64 RNU5B-6P-201ENST00000516765 68 ntBASIC1.01□□□□□ -2.25
TMEM39AQ9NV64 MIR4714-201ENST00000580728 77 ntBASIC1.01□□□□□ -2.25
TMEM39AQ9NV64 SNORD45.1-201ENST00000363181 77 ntBASIC1□□□□□ -2.25
TMEM39AQ9NV64 RNA5SP517-201ENST00000364724 117 ntBASIC1□□□□□ -2.25
TMEM39AQ9NV64 MIR6509-201ENST00000614603 85 ntBASIC1□□□□□ -2.25
TMEM39AQ9NV64 AC069503.3-201ENST00000618674 145 ntBASIC1□□□□□ -2.25
TMEM39AQ9NV64 AC073869.9-201ENST00000641610 120 ntBASIC1□□□□□ -2.25
TMEM39AQ9NV64 RNU6-634P-201ENST00000459134 106 ntBASIC0.99□□□□□ -2.25
TMEM39AQ9NV64 MIR1273G-201ENST00000577677 100 ntBASIC0.99□□□□□ -2.25
TMEM39AQ9NV64 MIR203A-201ENST00000384836 110 ntBASIC0.97□□□□□ -2.25
TMEM39AQ9NV64 AC006210.1-201ENST00000424882 111 ntBASIC0.97□□□□□ -2.25
TMEM39AQ9NV64 AC018659.1-201ENST00000551083 169 ntBASIC0.97□□□□□ -2.25
TMEM39AQ9NV64 AL590095.2-201ENST00000604136 117 ntBASIC0.97□□□□□ -2.25
TMEM39AQ9NV64 AC092634.7-201ENST00000621022 103 ntBASIC0.97□□□□□ -2.25
TMEM39AQ9NV64 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
TMEM39AQ9NV64 SNORD110-201ENST00000408189 75 ntBASIC0.96□□□□□ -2.26
TMEM39AQ9NV64 MIR6513-201ENST00000621188 64 ntBASIC0.96□□□□□ -2.26
TMEM39AQ9NV64 RNU6-1187P-201ENST00000364771 110 ntBASIC0.95□□□□□ -2.26
TMEM39AQ9NV64 SNORD115-31-201ENST00000365318 82 ntBASIC0.95□□□□□ -2.26
TMEM39AQ9NV64 AC139453.2-201ENST00000487255 133 ntBASIC0.95□□□□□ -2.26
TMEM39AQ9NV64 AC114801.3-201ENST00000510231 177 ntBASIC0.95□□□□□ -2.26
TMEM39AQ9NV64 MIR4752-201ENST00000579672 72 ntBASIC0.95□□□□□ -2.26
TMEM39AQ9NV64 SNORA25.18-201ENST00000607153 114 ntBASIC0.95□□□□□ -2.26
TMEM39AQ9NV64 MIR8053-201ENST00000613344 75 ntBASIC0.95□□□□□ -2.26
TMEM39AQ9NV64 RNU6-110P-201ENST00000384508 104 ntBASIC0.94□□□□□ -2.26
TMEM39AQ9NV64 RNU6-604P-201ENST00000390917 100 ntBASIC0.94□□□□□ -2.26
TMEM39AQ9NV64 SNORD114-4-201ENST00000363962 75 ntBASIC0.93□□□□□ -2.26
TMEM39AQ9NV64 RNU6-260P-201ENST00000384092 107 ntBASIC0.93□□□□□ -2.26
TMEM39AQ9NV64 SNORD45A-201ENST00000384512 84 ntBASIC0.93□□□□□ -2.26
TMEM39AQ9NV64 AC069271.1-201ENST00000445577 156 ntBASIC0.93□□□□□ -2.26
TMEM39AQ9NV64 PSMC1P5-201ENST00000512850 177 ntBASIC0.93□□□□□ -2.26
TMEM39AQ9NV64 SNORD115-22-201ENST00000364456 82 ntBASIC0.92□□□□□ -2.26
TMEM39AQ9NV64 SNORA40.8-201ENST00000411034 126 ntBASIC0.92□□□□□ -2.26
TMEM39AQ9NV64 SNORA70.25-201ENST00000612741 95 ntBASIC0.92□□□□□ -2.26
TMEM39AQ9NV64 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.92□□□□□ -2.26
TMEM39AQ9NV64 RNA5SP457-201ENST00000363657 124 ntBASIC0.91□□□□□ -2.26
TMEM39AQ9NV64 RNU6-540P-201ENST00000384622 101 ntBASIC0.91□□□□□ -2.26
TMEM39AQ9NV64 MIR936-201ENST00000401264 98 ntBASIC0.91□□□□□ -2.26
TMEM39AQ9NV64 MIR4473-201ENST00000583731 91 ntBASIC0.91□□□□□ -2.26
TMEM39AQ9NV64 MIR3657-201ENST00000584818 117 ntBASIC0.91□□□□□ -2.26
TMEM39AQ9NV64 MIR6835-201ENST00000621552 64 ntBASIC0.91□□□□□ -2.26
TMEM39AQ9NV64 SNORD114-23-201ENST00000363536 72 ntBASIC0.9□□□□□ -2.27
TMEM39AQ9NV64 SNORD118-201ENST00000363593 134 ntBASIC0.9□□□□□ -2.27
TMEM39AQ9NV64 Y_RNA.407-201ENST00000383986 113 ntBASIC0.9□□□□□ -2.27
TMEM39AQ9NV64 RNU6-895P-201ENST00000384125 103 ntBASIC0.9□□□□□ -2.27
TMEM39AQ9NV64 SNORD30.1-201ENST00000391309 70 ntBASIC0.9□□□□□ -2.27
TMEM39AQ9NV64 SNORD71-201ENST00000411292 86 ntBASIC0.9□□□□□ -2.27
TMEM39AQ9NV64 RNU6-990P-201ENST00000364385 104 ntBASIC0.89□□□□□ -2.27
TMEM39AQ9NV64 RNU6-649P-201ENST00000384463 107 ntBASIC0.89□□□□□ -2.27
TMEM39AQ9NV64 RPL39P28-201ENST00000465655 155 ntBASIC0.89□□□□□ -2.27
TMEM39AQ9NV64 RNU6-881P-201ENST00000516813 102 ntBASIC0.89□□□□□ -2.27
TMEM39AQ9NV64 RNU1-29P-201ENST00000606574 126 ntBASIC0.89□□□□□ -2.27
TMEM39AQ9NV64 Y_RNA.115-201ENST00000363272 98 ntBASIC0.88□□□□□ -2.27
TMEM39AQ9NV64 MIR508-201ENST00000384857 115 ntBASIC0.88□□□□□ -2.27
TMEM39AQ9NV64 RNU6-539P-201ENST00000516665 103 ntBASIC0.88□□□□□ -2.27
TMEM39AQ9NV64 AC010487.4-201ENST00000637027 61 ntBASIC0.88□□□□□ -2.27
TMEM39AQ9NV64 RNU6-663P-201ENST00000391105 106 ntBASIC0.87□□□□□ -2.27
TMEM39AQ9NV64 MIR548AE1-201ENST00000583292 70 ntBASIC0.87□□□□□ -2.27
TMEM39AQ9NV64 MIR924-201ENST00000638017 53 ntBASIC0.87□□□□□ -2.27
TMEM39AQ9NV64 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.87□□□□□ -2.27
TMEM39AQ9NV64 SNORD113.1-201ENST00000363280 73 ntBASIC0.86□□□□□ -2.27
TMEM39AQ9NV64 MIR518A1-201ENST00000385068 85 ntBASIC0.86□□□□□ -2.27
TMEM39AQ9NV64 MIR652-201ENST00000385278 98 ntBASIC0.86□□□□□ -2.27
TMEM39AQ9NV64 RNA5SP147-201ENST00000516493 109 ntBASIC0.86□□□□□ -2.27
TMEM39AQ9NV64 SNORA2.1-201ENST00000363089 137 ntBASIC0.85□□□□□ -2.27
TMEM39AQ9NV64 RNU4-54P-201ENST00000516428 129 ntBASIC0.85□□□□□ -2.27
TMEM39AQ9NV64 MIR5706-201ENST00000579841 80 ntBASIC0.85□□□□□ -2.27
TMEM39AQ9NV64 MIR6866-201ENST00000638146 69 ntBASIC0.85□□□□□ -2.27
TMEM39AQ9NV64 SCARNA17.3-201ENST00000516381 125 ntBASIC0.84□□□□□ -2.27
TMEM39AQ9NV64 RNA5SP330-201ENST00000517096 96 ntBASIC0.84□□□□□ -2.27
TMEM39AQ9NV64 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 226.2 ms