Protein–RNA interactions for Protein: Q9NQT5

EXOSC3, Exosome complex component RRP40, humanhuman

Known RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3Q9NQT5 RNU6-880P-201ENST00000384526 107 ntBASIC-0.56□□□□□ -2.5
EXOSC3Q9NQT5 SNORD83B-201ENST00000386745 93 ntBASIC-0.56□□□□□ -2.5
EXOSC3Q9NQT5 MIR548E-201ENST00000408287 88 ntBASIC-0.56□□□□□ -2.5
EXOSC3Q9NQT5 SNORA19.1-201ENST00000410656 129 ntBASIC-0.56□□□□□ -2.5
EXOSC3Q9NQT5 AL445193.1-201ENST00000441183 141 ntBASIC-0.56□□□□□ -2.5
EXOSC3Q9NQT5 SNORD4B-201ENST00000459083 72 ntBASIC-0.56□□□□□ -2.5
EXOSC3Q9NQT5 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.56□□□□□ -2.5
EXOSC3Q9NQT5 RNA5SP470-201ENST00000516463 106 ntBASIC-0.56□□□□□ -2.5
EXOSC3Q9NQT5 RNU6-881P-201ENST00000516813 102 ntBASIC-0.56□□□□□ -2.5
EXOSC3Q9NQT5 MIR3064-201ENST00000581130 66 ntBASIC-0.56□□□□□ -2.5
EXOSC3Q9NQT5 MIR3140-201ENST00000583685 90 ntBASIC-0.56□□□□□ -2.5
EXOSC3Q9NQT5 MIR4499-201ENST00000584834 69 ntBASIC-0.56□□□□□ -2.5
EXOSC3Q9NQT5 MIR4324-201ENST00000584846 72 ntBASIC-0.56□□□□□ -2.5
EXOSC3Q9NQT5 AC145423.2-201ENST00000610631 239 ntBASIC-0.56□□□□□ -2.5
EXOSC3Q9NQT5 MIR548U-201ENST00000390728 81 ntBASIC-0.57□□□□□ -2.5
EXOSC3Q9NQT5 SNORD38.3-201ENST00000516599 73 ntBASIC-0.57□□□□□ -2.5
EXOSC3Q9NQT5 MIR4636-201ENST00000582271 80 ntBASIC-0.57□□□□□ -2.5
EXOSC3Q9NQT5 AC104996.3-201ENST00000590718 94 ntBASIC-0.57□□□□□ -2.5
EXOSC3Q9NQT5 SNORD114-4-201ENST00000363962 75 ntBASIC-0.58□□□□□ -2.5
EXOSC3Q9NQT5 RNU6-704P-201ENST00000364162 103 ntBASIC-0.58□□□□□ -2.5
EXOSC3Q9NQT5 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.58□□□□□ -2.5
EXOSC3Q9NQT5 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.58□□□□□ -2.5
EXOSC3Q9NQT5 RNU6-900P-201ENST00000384498 102 ntBASIC-0.58□□□□□ -2.5
EXOSC3Q9NQT5 RNU6-901P-201ENST00000384593 106 ntBASIC-0.58□□□□□ -2.5
EXOSC3Q9NQT5 RNU6-519P-201ENST00000410590 108 ntBASIC-0.58□□□□□ -2.5
EXOSC3Q9NQT5 Z95118.1-201ENST00000421372 247 ntBASIC-0.58□□□□□ -2.5
EXOSC3Q9NQT5 MIR378F-201ENST00000578143 78 ntBASIC-0.58□□□□□ -2.5
EXOSC3Q9NQT5 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.58□□□□□ -2.5
EXOSC3Q9NQT5 MIR6851-201ENST00000617060 67 ntBASIC-0.58□□□□□ -2.5
EXOSC3Q9NQT5 SNORA63.2-201ENST00000362603 126 ntBASIC-0.59□□□□□ -2.5
EXOSC3Q9NQT5 Y_RNA.466-201ENST00000384294 113 ntBASIC-0.59□□□□□ -2.5
EXOSC3Q9NQT5 snoU13.13-201ENST00000458842 104 ntBASIC-0.59□□□□□ -2.5
EXOSC3Q9NQT5 RNU6-412P-201ENST00000516434 106 ntBASIC-0.59□□□□□ -2.5
EXOSC3Q9NQT5 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.6□□□□□ -2.51
EXOSC3Q9NQT5 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.6□□□□□ -2.51
EXOSC3Q9NQT5 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.6□□□□□ -2.51
EXOSC3Q9NQT5 MIR7-2-201ENST00000384970 110 ntBASIC-0.6□□□□□ -2.51
EXOSC3Q9NQT5 MIR204-201ENST00000385200 110 ntBASIC-0.6□□□□□ -2.51
EXOSC3Q9NQT5 RNA5SP292-201ENST00000390974 118 ntBASIC-0.6□□□□□ -2.51
EXOSC3Q9NQT5 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.6□□□□□ -2.51
EXOSC3Q9NQT5 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.6□□□□□ -2.51
EXOSC3Q9NQT5 MIR6738-201ENST00000619620 64 ntBASIC-0.6□□□□□ -2.51
EXOSC3Q9NQT5 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.6□□□□□ -2.51
EXOSC3Q9NQT5 RNU6-431P-201ENST00000383874 107 ntBASIC-0.61□□□□□ -2.51
EXOSC3Q9NQT5 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.61□□□□□ -2.51
EXOSC3Q9NQT5 MIR1265-201ENST00000408444 86 ntBASIC-0.61□□□□□ -2.51
EXOSC3Q9NQT5 SCARNA18B-201ENST00000458806 135 ntBASIC-0.61□□□□□ -2.51
EXOSC3Q9NQT5 AC021146.6-201ENST00000514659 117 ntBASIC-0.61□□□□□ -2.51
EXOSC3Q9NQT5 SCARNA23-201ENST00000516060 130 ntBASIC-0.61□□□□□ -2.51
EXOSC3Q9NQT5 RNU6-904P-201ENST00000516206 101 ntBASIC-0.61□□□□□ -2.51
EXOSC3Q9NQT5 uc_338.19-201ENST00000616808 99 ntBASIC-0.61□□□□□ -2.51
EXOSC3Q9NQT5 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.62□□□□□ -2.51
EXOSC3Q9NQT5 RNU6-746P-201ENST00000384112 109 ntBASIC-0.62□□□□□ -2.51
EXOSC3Q9NQT5 SNORD2-201ENST00000459163 69 ntBASIC-0.62□□□□□ -2.51
EXOSC3Q9NQT5 RNU6-24P-201ENST00000384440 107 ntBASIC-0.63□□□□□ -2.51
EXOSC3Q9NQT5 MT-TR-201ENST00000387439 65 ntBASIC-0.63□□□□□ -2.51
EXOSC3Q9NQT5 SNORD90-201ENST00000391145 111 ntBASIC-0.63□□□□□ -2.51
EXOSC3Q9NQT5 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.63□□□□□ -2.51
EXOSC3Q9NQT5 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.63□□□□□ -2.51
EXOSC3Q9NQT5 RNU7-55P-201ENST00000459426 62 ntBASIC-0.63□□□□□ -2.51
EXOSC3Q9NQT5 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.63□□□□□ -2.51
EXOSC3Q9NQT5 MIR3115-201ENST00000577915 68 ntBASIC-0.63□□□□□ -2.51
EXOSC3Q9NQT5 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.64□□□□□ -2.51
EXOSC3Q9NQT5 RNU6-10P-201ENST00000384036 107 ntBASIC-0.64□□□□□ -2.51
EXOSC3Q9NQT5 SNORD64-201ENST00000386683 67 ntBASIC-0.64□□□□□ -2.51
EXOSC3Q9NQT5 RNU6-274P-201ENST00000459566 107 ntBASIC-0.64□□□□□ -2.51
EXOSC3Q9NQT5 SNORA40.17-201ENST00000517256 115 ntBASIC-0.64□□□□□ -2.51
EXOSC3Q9NQT5 MIR3179-1-201ENST00000578940 84 ntBASIC-0.64□□□□□ -2.51
EXOSC3Q9NQT5 MIR3179-2-201ENST00000579107 84 ntBASIC-0.64□□□□□ -2.51
EXOSC3Q9NQT5 MIR3179-3-201ENST00000579566 84 ntBASIC-0.64□□□□□ -2.51
EXOSC3Q9NQT5 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.64□□□□□ -2.51
EXOSC3Q9NQT5 MIR3179-4-201ENST00000617599 84 ntBASIC-0.64□□□□□ -2.51
EXOSC3Q9NQT5 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.65□□□□□ -2.51
EXOSC3Q9NQT5 RNU6-495P-201ENST00000362995 107 ntBASIC-0.65□□□□□ -2.51
EXOSC3Q9NQT5 RNU4-32P-201ENST00000363404 141 ntBASIC-0.65□□□□□ -2.51
EXOSC3Q9NQT5 SNORD95.1-201ENST00000364099 68 ntBASIC-0.65□□□□□ -2.51
EXOSC3Q9NQT5 SNORD58A-201ENST00000383875 65 ntBASIC-0.65□□□□□ -2.51
EXOSC3Q9NQT5 SNORA24B-201ENST00000384176 131 ntBASIC-0.65□□□□□ -2.51
EXOSC3Q9NQT5 MIR517B-201ENST00000385102 67 ntBASIC-0.65□□□□□ -2.51
EXOSC3Q9NQT5 SNORD22.1-201ENST00000516331 125 ntBASIC-0.65□□□□□ -2.51
EXOSC3Q9NQT5 SNORA18.5-201ENST00000516616 101 ntBASIC-0.65□□□□□ -2.51
EXOSC3Q9NQT5 MIR5704-201ENST00000584029 77 ntBASIC-0.65□□□□□ -2.51
EXOSC3Q9NQT5 MIR8068-201ENST00000618032 68 ntBASIC-0.65□□□□□ -2.51
EXOSC3Q9NQT5 MIR382-201ENST00000637119 76 ntBASIC-0.65□□□□□ -2.51
EXOSC3Q9NQT5 RNU6-502P-201ENST00000362419 108 ntBASIC-0.66□□□□□ -2.52
EXOSC3Q9NQT5 RNU6-30P-201ENST00000384561 107 ntBASIC-0.66□□□□□ -2.52
EXOSC3Q9NQT5 RNU6-959P-201ENST00000384671 107 ntBASIC-0.66□□□□□ -2.52
EXOSC3Q9NQT5 MIR590-201ENST00000385008 97 ntBASIC-0.66□□□□□ -2.52
EXOSC3Q9NQT5 MIR518B-201ENST00000385127 83 ntBASIC-0.66□□□□□ -2.52
EXOSC3Q9NQT5 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.66□□□□□ -2.52
EXOSC3Q9NQT5 RNU6-972P-201ENST00000391208 107 ntBASIC-0.66□□□□□ -2.52
EXOSC3Q9NQT5 RNU6-887P-201ENST00000410660 100 ntBASIC-0.66□□□□□ -2.52
EXOSC3Q9NQT5 MIR4306-201ENST00000583390 91 ntBASIC-0.66□□□□□ -2.52
EXOSC3Q9NQT5 RNU6-990P-201ENST00000364385 104 ntBASIC-0.67□□□□□ -2.52
EXOSC3Q9NQT5 RNU6-476P-201ENST00000384726 107 ntBASIC-0.67□□□□□ -2.52
EXOSC3Q9NQT5 AC140658.3-201ENST00000567603 271 ntBASIC-0.67□□□□□ -2.52
EXOSC3Q9NQT5 SNORA63.6-201ENST00000364921 119 ntBASIC-0.68□□□□□ -2.52
EXOSC3Q9NQT5 RNY4P3-201ENST00000365254 95 ntBASIC-0.68□□□□□ -2.52
EXOSC3Q9NQT5 MIR147A-201ENST00000385079 72 ntBASIC-0.68□□□□□ -2.52
EXOSC3Q9NQT5 MIR1302-5-201ENST00000408164 150 ntBASIC-0.68□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms