Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 AC097510.1-201ENST00000510945 133 ntBASIC-0.47□□□□□ -2.48
CHMP1AQ9HD42 MIR4263-201ENST00000584745 83 ntBASIC-0.47□□□□□ -2.48
CHMP1AQ9HD42 MIR214-201ENST00000385214 110 ntBASIC-0.48□□□□□ -2.49
CHMP1AQ9HD42 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.48□□□□□ -2.49
CHMP1AQ9HD42 MIR4788-201ENST00000639104 80 ntBASIC-0.48□□□□□ -2.49
CHMP1AQ9HD42 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.49□□□□□ -2.49
CHMP1AQ9HD42 RNY4P3-201ENST00000365254 95 ntBASIC-0.49□□□□□ -2.49
CHMP1AQ9HD42 AL606753.1-201ENST00000427435 87 ntBASIC-0.49□□□□□ -2.49
CHMP1AQ9HD42 SNORD115-25-201ENST00000362619 82 ntBASIC-0.5□□□□□ -2.49
CHMP1AQ9HD42 RNY4P18-201ENST00000391107 89 ntBASIC-0.5□□□□□ -2.49
CHMP1AQ9HD42 MTATP6P29-201ENST00000415057 132 ntBASIC-0.5□□□□□ -2.49
CHMP1AQ9HD42 MIR2909-201ENST00000617113 69 ntBASIC-0.5□□□□□ -2.49
CHMP1AQ9HD42 RNU6-900P-201ENST00000384498 102 ntBASIC-0.51□□□□□ -2.49
CHMP1AQ9HD42 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.51□□□□□ -2.49
CHMP1AQ9HD42 SNORD2-201ENST00000459163 69 ntBASIC-0.51□□□□□ -2.49
CHMP1AQ9HD42 MTATP8P2-201ENST00000435212 202 ntBASIC-0.52□□□□□ -2.49
CHMP1AQ9HD42 RNU7-24P-201ENST00000458867 62 ntBASIC-0.52□□□□□ -2.49
CHMP1AQ9HD42 RNU6-158P-201ENST00000517104 100 ntBASIC-0.52□□□□□ -2.49
CHMP1AQ9HD42 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.53□□□□□ -2.49
CHMP1AQ9HD42 MIR450A1-201ENST00000362262 91 ntBASIC-0.53□□□□□ -2.49
CHMP1AQ9HD42 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.53□□□□□ -2.49
CHMP1AQ9HD42 MIR489-201ENST00000384923 84 ntBASIC-0.53□□□□□ -2.49
CHMP1AQ9HD42 SNORD75.2-201ENST00000408784 58 ntBASIC-0.53□□□□□ -2.49
CHMP1AQ9HD42 AL031737.1-201ENST00000450125 223 ntBASIC-0.53□□□□□ -2.49
CHMP1AQ9HD42 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.54□□□□□ -2.5
CHMP1AQ9HD42 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.54□□□□□ -2.5
CHMP1AQ9HD42 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.54□□□□□ -2.5
CHMP1AQ9HD42 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.54□□□□□ -2.5
CHMP1AQ9HD42 snoU13.17-201ENST00000458802 104 ntBASIC-0.54□□□□□ -2.5
CHMP1AQ9HD42 MIR4796-201ENST00000580742 81 ntBASIC-0.54□□□□□ -2.5
CHMP1AQ9HD42 SNORD114-11-201ENST00000363738 75 ntBASIC-0.55□□□□□ -2.5
CHMP1AQ9HD42 RNU6-990P-201ENST00000364385 104 ntBASIC-0.55□□□□□ -2.5
CHMP1AQ9HD42 RNU7-55P-201ENST00000459426 62 ntBASIC-0.55□□□□□ -2.5
CHMP1AQ9HD42 RNU6-320P-201ENST00000516511 106 ntBASIC-0.55□□□□□ -2.5
CHMP1AQ9HD42 MIR1236-201ENST00000408340 102 ntBASIC-0.56□□□□□ -2.5
CHMP1AQ9HD42 Y_RNA.629-201ENST00000411368 105 ntBASIC-0.56□□□□□ -2.5
CHMP1AQ9HD42 RNA5SP66-201ENST00000517178 101 ntBASIC-0.56□□□□□ -2.5
CHMP1AQ9HD42 RNU6-502P-201ENST00000362419 108 ntBASIC-0.57□□□□□ -2.5
CHMP1AQ9HD42 RNU5F-1-201ENST00000362507 117 ntBASIC-0.57□□□□□ -2.5
CHMP1AQ9HD42 RNU6-382P-201ENST00000365181 106 ntBASIC-0.57□□□□□ -2.5
CHMP1AQ9HD42 snoU13.13-201ENST00000458842 104 ntBASIC-0.57□□□□□ -2.5
CHMP1AQ9HD42 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.57□□□□□ -2.5
CHMP1AQ9HD42 RNU6-789P-201ENST00000517105 102 ntBASIC-0.57□□□□□ -2.5
CHMP1AQ9HD42 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.58□□□□□ -2.5
CHMP1AQ9HD42 RNU6-824P-201ENST00000363724 104 ntBASIC-0.58□□□□□ -2.5
CHMP1AQ9HD42 SNORA63.6-201ENST00000364921 119 ntBASIC-0.58□□□□□ -2.5
CHMP1AQ9HD42 SNORD56B-201ENST00000384713 71 ntBASIC-0.58□□□□□ -2.5
CHMP1AQ9HD42 RNU7-153P-201ENST00000516455 62 ntBASIC-0.58□□□□□ -2.5
CHMP1AQ9HD42 SNORA40.17-201ENST00000517256 115 ntBASIC-0.58□□□□□ -2.5
CHMP1AQ9HD42 RNU6-755P-201ENST00000364400 103 ntBASIC-0.59□□□□□ -2.5
CHMP1AQ9HD42 SNORD14C-201ENST00000365382 88 ntBASIC-0.59□□□□□ -2.5
CHMP1AQ9HD42 RNU6-406P-201ENST00000516470 107 ntBASIC-0.59□□□□□ -2.5
CHMP1AQ9HD42 AC006254.2-201ENST00000603259 279 ntBASIC-0.59□□□□□ -2.5
CHMP1AQ9HD42 MIR2052-201ENST00000636055 55 ntBASIC-0.59□□□□□ -2.5
CHMP1AQ9HD42 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.6□□□□□ -2.51
CHMP1AQ9HD42 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.6□□□□□ -2.51
CHMP1AQ9HD42 SNORD115-27-201ENST00000364430 82 ntBASIC-0.6□□□□□ -2.51
CHMP1AQ9HD42 SNORD126-201ENST00000459475 77 ntBASIC-0.6□□□□□ -2.51
CHMP1AQ9HD42 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.6□□□□□ -2.51
CHMP1AQ9HD42 AP001318.4-201ENST00000616637 121 ntBASIC-0.6□□□□□ -2.51
CHMP1AQ9HD42 AL109933.3-201ENST00000619095 188 ntBASIC-0.6□□□□□ -2.51
CHMP1AQ9HD42 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.61□□□□□ -2.51
CHMP1AQ9HD42 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.61□□□□□ -2.51
CHMP1AQ9HD42 AL445193.1-201ENST00000441183 141 ntBASIC-0.61□□□□□ -2.51
CHMP1AQ9HD42 MIR4773-1-201ENST00000637203 78 ntBASIC-0.61□□□□□ -2.51
CHMP1AQ9HD42 RNU6-1081P-201ENST00000384537 107 ntBASIC-0.62□□□□□ -2.51
CHMP1AQ9HD42 RNU6-901P-201ENST00000384593 106 ntBASIC-0.62□□□□□ -2.51
CHMP1AQ9HD42 MIR4280-201ENST00000582178 76 ntBASIC-0.62□□□□□ -2.51
CHMP1AQ9HD42 MIR6773-201ENST00000612812 74 ntBASIC-0.62□□□□□ -2.51
CHMP1AQ9HD42 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.63□□□□□ -2.51
CHMP1AQ9HD42 RNU4-61P-201ENST00000411243 107 ntBASIC-0.63□□□□□ -2.51
CHMP1AQ9HD42 uc_338.36-201ENST00000622331 158 ntBASIC-0.63□□□□□ -2.51
CHMP1AQ9HD42 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.63□□□□□ -2.51
CHMP1AQ9HD42 AC093726.3-201ENST00000637588 150 ntBASIC-0.63□□□□□ -2.51
CHMP1AQ9HD42 RNU6-215P-201ENST00000365169 102 ntBASIC-0.64□□□□□ -2.51
CHMP1AQ9HD42 MIR196A2-201ENST00000385189 110 ntBASIC-0.64□□□□□ -2.51
CHMP1AQ9HD42 RNU6-337P-201ENST00000391243 106 ntBASIC-0.64□□□□□ -2.51
CHMP1AQ9HD42 AC021146.9-201ENST00000512503 156 ntBASIC-0.64□□□□□ -2.51
CHMP1AQ9HD42 U6.81-201ENST00000612550 106 ntBASIC-0.64□□□□□ -2.51
CHMP1AQ9HD42 SNORA63.4-201ENST00000362763 126 ntBASIC-0.65□□□□□ -2.51
CHMP1AQ9HD42 RNA5SP275-201ENST00000363936 118 ntBASIC-0.65□□□□□ -2.51
CHMP1AQ9HD42 RNU6-973P-201ENST00000364690 107 ntBASIC-0.65□□□□□ -2.51
CHMP1AQ9HD42 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.65□□□□□ -2.51
CHMP1AQ9HD42 RNU6-260P-201ENST00000384092 107 ntBASIC-0.65□□□□□ -2.51
CHMP1AQ9HD42 SNORD20-201ENST00000384550 80 ntBASIC-0.65□□□□□ -2.51
CHMP1AQ9HD42 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.65□□□□□ -2.51
CHMP1AQ9HD42 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.65□□□□□ -2.51
CHMP1AQ9HD42 MIR4432-201ENST00000581823 84 ntBASIC-0.65□□□□□ -2.51
CHMP1AQ9HD42 MIR519C-201ENST00000385053 87 ntBASIC-0.66□□□□□ -2.52
CHMP1AQ9HD42 AC096531.1-201ENST00000419107 107 ntBASIC-0.66□□□□□ -2.52
CHMP1AQ9HD42 SNORA40.13-201ENST00000516379 120 ntBASIC-0.66□□□□□ -2.52
CHMP1AQ9HD42 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.66□□□□□ -2.52
CHMP1AQ9HD42 MIR329-2-201ENST00000385029 84 ntBASIC-0.67□□□□□ -2.52
CHMP1AQ9HD42 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.67□□□□□ -2.52
CHMP1AQ9HD42 AC114755.3-201ENST00000481111 251 ntBASIC-0.67□□□□□ -2.52
CHMP1AQ9HD42 RNA5SP480-201ENST00000516840 109 ntBASIC-0.67□□□□□ -2.52
CHMP1AQ9HD42 RNA5SP169-201ENST00000517268 117 ntBASIC-0.67□□□□□ -2.52
CHMP1AQ9HD42 MIR4668-201ENST00000582284 70 ntBASIC-0.67□□□□□ -2.52
CHMP1AQ9HD42 MALAT1.1-201ENST00000618249 95 ntBASIC-0.67□□□□□ -2.52
CHMP1AQ9HD42 AL391099.1-201ENST00000624635 187 ntBASIC-0.67□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms