Protein–RNA interactions for Protein: Q9C0C4

SEMA4C, Semaphorin-4C, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4CQ9C0C4 RNU6V-201ENST00000384105 107 ntBASIC0.74□□□□□ -2.29
SEMA4CQ9C0C4 Y_RNA.565-201ENST00000384719 101 ntBASIC0.74□□□□□ -2.29
SEMA4CQ9C0C4 RNU6-1177P-201ENST00000391058 104 ntBASIC0.74□□□□□ -2.29
SEMA4CQ9C0C4 RNA5SP484-201ENST00000458857 111 ntBASIC0.74□□□□□ -2.29
SEMA4CQ9C0C4 PSMC1P5-201ENST00000512850 177 ntBASIC0.74□□□□□ -2.29
SEMA4CQ9C0C4 RNA5SP268-201ENST00000516828 124 ntBASIC0.74□□□□□ -2.29
SEMA4CQ9C0C4 YWHAEP2-201ENST00000580066 112 ntBASIC0.74□□□□□ -2.29
SEMA4CQ9C0C4 YWHAEP3-201ENST00000582767 121 ntBASIC0.74□□□□□ -2.29
SEMA4CQ9C0C4 AC145423.2-201ENST00000610631 239 ntBASIC0.74□□□□□ -2.29
SEMA4CQ9C0C4 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.73□□□□□ -2.29
SEMA4CQ9C0C4 RNU6-340P-201ENST00000364005 107 ntBASIC0.73□□□□□ -2.29
SEMA4CQ9C0C4 SNORD41.1-201ENST00000391000 69 ntBASIC0.73□□□□□ -2.29
SEMA4CQ9C0C4 Y_RNA.660-201ENST00000516002 120 ntBASIC0.73□□□□□ -2.29
SEMA4CQ9C0C4 RNU5B-6P-201ENST00000516765 68 ntBASIC0.73□□□□□ -2.29
SEMA4CQ9C0C4 RNU6-135P-201ENST00000516769 101 ntBASIC0.73□□□□□ -2.29
SEMA4CQ9C0C4 SNORA25.18-201ENST00000607153 114 ntBASIC0.73□□□□□ -2.29
SEMA4CQ9C0C4 MIR7107-201ENST00000611489 80 ntBASIC0.73□□□□□ -2.29
SEMA4CQ9C0C4 MIR4662A-201ENST00000637499 67 ntBASIC0.73□□□□□ -2.29
SEMA4CQ9C0C4 Y_RNA.264-201ENST00000364665 102 ntBASIC0.72□□□□□ -2.29
SEMA4CQ9C0C4 RNU6-154P-201ENST00000384306 106 ntBASIC0.72□□□□□ -2.29
SEMA4CQ9C0C4 MIR203A-201ENST00000384836 110 ntBASIC0.72□□□□□ -2.29
SEMA4CQ9C0C4 AC097510.1-201ENST00000510945 133 ntBASIC0.72□□□□□ -2.29
SEMA4CQ9C0C4 U7.4-201ENST00000614961 63 ntBASIC0.72□□□□□ -2.29
SEMA4CQ9C0C4 MIR608-201ENST00000384820 100 ntBASIC0.71□□□□□ -2.3
SEMA4CQ9C0C4 RNU6-380P-201ENST00000410207 107 ntBASIC0.71□□□□□ -2.3
SEMA4CQ9C0C4 RNU6-70P-201ENST00000516438 60 ntBASIC0.71□□□□□ -2.3
SEMA4CQ9C0C4 RNU6-303P-201ENST00000517091 106 ntBASIC0.71□□□□□ -2.3
SEMA4CQ9C0C4 MIR4460-201ENST00000577862 86 ntBASIC0.71□□□□□ -2.3
SEMA4CQ9C0C4 MIR6086-201ENST00000638065 55 ntBASIC0.71□□□□□ -2.3
SEMA4CQ9C0C4 RNA5SP517-201ENST00000364724 117 ntBASIC0.7□□□□□ -2.3
SEMA4CQ9C0C4 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.7□□□□□ -2.3
SEMA4CQ9C0C4 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.7□□□□□ -2.3
SEMA4CQ9C0C4 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.7□□□□□ -2.3
SEMA4CQ9C0C4 MIR6866-201ENST00000638146 69 ntBASIC0.7□□□□□ -2.3
SEMA4CQ9C0C4 RNU1-141P-201ENST00000364623 158 ntBASIC0.69□□□□□ -2.3
SEMA4CQ9C0C4 SNORA8.1-201ENST00000384250 140 ntBASIC0.69□□□□□ -2.3
SEMA4CQ9C0C4 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.69□□□□□ -2.3
SEMA4CQ9C0C4 AC098934.3-201ENST00000430450 190 ntBASIC0.69□□□□□ -2.3
SEMA4CQ9C0C4 AC069271.1-201ENST00000445577 156 ntBASIC0.69□□□□□ -2.3
SEMA4CQ9C0C4 SNORD42B-201ENST00000458893 67 ntBASIC0.69□□□□□ -2.3
SEMA4CQ9C0C4 RNU4-54P-201ENST00000516428 129 ntBASIC0.69□□□□□ -2.3
SEMA4CQ9C0C4 RNU6-807P-201ENST00000516805 107 ntBASIC0.69□□□□□ -2.3
SEMA4CQ9C0C4 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.69□□□□□ -2.3
SEMA4CQ9C0C4 AC018659.1-201ENST00000551083 169 ntBASIC0.69□□□□□ -2.3
SEMA4CQ9C0C4 U6.81-201ENST00000612550 106 ntBASIC0.69□□□□□ -2.3
SEMA4CQ9C0C4 MIR548O2-201ENST00000616090 70 ntBASIC0.69□□□□□ -2.3
SEMA4CQ9C0C4 AC243829.3-201ENST00000622177 108 ntBASIC0.69□□□□□ -2.3
SEMA4CQ9C0C4 SNORA8.2-201ENST00000384372 139 ntBASIC0.68□□□□□ -2.3
SEMA4CQ9C0C4 Y_RNA.545-201ENST00000384652 105 ntBASIC0.68□□□□□ -2.3
SEMA4CQ9C0C4 MIR140-201ENST00000385282 100 ntBASIC0.68□□□□□ -2.3
SEMA4CQ9C0C4 U3.27-201ENST00000391237 200 ntBASIC0.68□□□□□ -2.3
SEMA4CQ9C0C4 MIR4473-201ENST00000583731 91 ntBASIC0.68□□□□□ -2.3
SEMA4CQ9C0C4 SNORA70.25-201ENST00000612741 95 ntBASIC0.68□□□□□ -2.3
SEMA4CQ9C0C4 MIR6828-201ENST00000636181 60 ntBASIC0.68□□□□□ -2.3
SEMA4CQ9C0C4 RNA5SP347-201ENST00000362445 119 ntBASIC0.67□□□□□ -2.3
SEMA4CQ9C0C4 AC074348.1-201ENST00000426503 132 ntBASIC0.67□□□□□ -2.3
SEMA4CQ9C0C4 AC093423.1-201ENST00000440817 142 ntBASIC0.67□□□□□ -2.3
SEMA4CQ9C0C4 RNU6-274P-201ENST00000459566 107 ntBASIC0.67□□□□□ -2.3
SEMA4CQ9C0C4 RNU6-1296P-201ENST00000383879 107 ntBASIC0.66□□□□□ -2.3
SEMA4CQ9C0C4 RNU2-59P-201ENST00000410482 191 ntBASIC0.66□□□□□ -2.3
SEMA4CQ9C0C4 AL691482.2-201ENST00000457453 84 ntBASIC0.66□□□□□ -2.3
SEMA4CQ9C0C4 RNU7-74P-201ENST00000459104 62 ntBASIC0.66□□□□□ -2.3
SEMA4CQ9C0C4 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.66□□□□□ -2.3
SEMA4CQ9C0C4 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
SEMA4CQ9C0C4 AC092634.7-201ENST00000621022 103 ntBASIC0.66□□□□□ -2.3
SEMA4CQ9C0C4 AL162376.1-201ENST00000624117 175 ntBASIC0.66□□□□□ -2.3
SEMA4CQ9C0C4 MT-TY-201ENST00000387409 66 ntBASIC0.65□□□□□ -2.31
SEMA4CQ9C0C4 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
SEMA4CQ9C0C4 Y_RNA.606-201ENST00000410579 103 ntBASIC0.65□□□□□ -2.31
SEMA4CQ9C0C4 RNU6-495P-201ENST00000362995 107 ntBASIC0.64□□□□□ -2.31
SEMA4CQ9C0C4 RNA5SP499-201ENST00000363982 119 ntBASIC0.64□□□□□ -2.31
SEMA4CQ9C0C4 RNU6-681P-201ENST00000364012 104 ntBASIC0.64□□□□□ -2.31
SEMA4CQ9C0C4 RNU6-990P-201ENST00000364385 104 ntBASIC0.64□□□□□ -2.31
SEMA4CQ9C0C4 AC006210.1-201ENST00000424882 111 ntBASIC0.64□□□□□ -2.31
SEMA4CQ9C0C4 RNU6-523P-201ENST00000516304 54 ntBASIC0.64□□□□□ -2.31
SEMA4CQ9C0C4 RNA5SP147-201ENST00000516493 109 ntBASIC0.64□□□□□ -2.31
SEMA4CQ9C0C4 RNU6-1015P-201ENST00000517121 99 ntBASIC0.64□□□□□ -2.31
SEMA4CQ9C0C4 MIR6509-201ENST00000614603 85 ntBASIC0.64□□□□□ -2.31
SEMA4CQ9C0C4 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.64□□□□□ -2.31
SEMA4CQ9C0C4 MIR1297-201ENST00000637311 77 ntBASIC0.64□□□□□ -2.31
SEMA4CQ9C0C4 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
SEMA4CQ9C0C4 RNU4-45P-201ENST00000365469 141 ntBASIC0.63□□□□□ -2.31
SEMA4CQ9C0C4 Y_RNA.423-201ENST00000384057 113 ntBASIC0.63□□□□□ -2.31
SEMA4CQ9C0C4 SNORD110-201ENST00000408189 75 ntBASIC0.63□□□□□ -2.31
SEMA4CQ9C0C4 SNORD75.2-201ENST00000408784 58 ntBASIC0.63□□□□□ -2.31
SEMA4CQ9C0C4 MIR548AE1-201ENST00000583292 70 ntBASIC0.63□□□□□ -2.31
SEMA4CQ9C0C4 MIR3675-201ENST00000583661 73 ntBASIC0.63□□□□□ -2.31
SEMA4CQ9C0C4 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.62□□□□□ -2.31
SEMA4CQ9C0C4 SNORD45.1-201ENST00000363181 77 ntBASIC0.62□□□□□ -2.31
SEMA4CQ9C0C4 RNU6-411P-201ENST00000384451 107 ntBASIC0.62□□□□□ -2.31
SEMA4CQ9C0C4 RNU6-1241P-201ENST00000384536 107 ntBASIC0.62□□□□□ -2.31
SEMA4CQ9C0C4 RNU6-604P-201ENST00000390917 100 ntBASIC0.62□□□□□ -2.31
SEMA4CQ9C0C4 RNU6-1232P-201ENST00000516299 86 ntBASIC0.62□□□□□ -2.31
SEMA4CQ9C0C4 RNU6-229P-201ENST00000516614 102 ntBASIC0.62□□□□□ -2.31
SEMA4CQ9C0C4 RNU6-1039P-201ENST00000383931 107 ntBASIC0.61□□□□□ -2.31
SEMA4CQ9C0C4 SNORD45A-201ENST00000384512 84 ntBASIC0.61□□□□□ -2.31
SEMA4CQ9C0C4 MIR154-201ENST00000385243 84 ntBASIC0.61□□□□□ -2.31
SEMA4CQ9C0C4 MIR216B-201ENST00000390186 82 ntBASIC0.61□□□□□ -2.31
SEMA4CQ9C0C4 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.6□□□□□ -2.31
SEMA4CQ9C0C4 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 178.5 ms