Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 RNA5SP259-201ENST00000365541 109 ntBASIC0.67□□□□□ -2.3
KRTAP4-4Q9BYR3 RNU6-301P-201ENST00000384277 107 ntBASIC0.67□□□□□ -2.3
KRTAP4-4Q9BYR3 SNORA46-201ENST00000384762 135 ntBASIC0.67□□□□□ -2.3
KRTAP4-4Q9BYR3 MIR520F-201ENST00000384824 87 ntBASIC0.67□□□□□ -2.3
KRTAP4-4Q9BYR3 MIR1179-201ENST00000408703 91 ntBASIC0.67□□□□□ -2.3
KRTAP4-4Q9BYR3 SNORA3.3-201ENST00000408712 125 ntBASIC0.67□□□□□ -2.3
KRTAP4-4Q9BYR3 RNA5SP129-201ENST00000410276 118 ntBASIC0.67□□□□□ -2.3
KRTAP4-4Q9BYR3 RNA5SP100-201ENST00000410903 110 ntBASIC0.67□□□□□ -2.3
KRTAP4-4Q9BYR3 RNA5SP59-201ENST00000410922 110 ntBASIC0.67□□□□□ -2.3
KRTAP4-4Q9BYR3 RNA5SP306-201ENST00000411087 107 ntBASIC0.67□□□□□ -2.3
KRTAP4-4Q9BYR3 SNORA74C-2-201ENST00000411179 201 ntBASIC0.67□□□□□ -2.3
KRTAP4-4Q9BYR3 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC0.67□□□□□ -2.3
KRTAP4-4Q9BYR3 HMGN2P3-201ENST00000433603 273 ntBASIC0.67□□□□□ -2.3
KRTAP4-4Q9BYR3 AC115115.1-201ENST00000449927 248 ntBASIC0.67□□□□□ -2.3
KRTAP4-4Q9BYR3 snoU13.23-201ENST00000458863 104 ntBASIC0.67□□□□□ -2.3
KRTAP4-4Q9BYR3 RNA5SP246-201ENST00000458909 119 ntBASIC0.67□□□□□ -2.3
KRTAP4-4Q9BYR3 RNU7-55P-201ENST00000459426 62 ntBASIC0.67□□□□□ -2.3
KRTAP4-4Q9BYR3 RN7SL293P-201ENST00000481765 281 ntBASIC0.67□□□□□ -2.3
KRTAP4-4Q9BYR3 RNU6-295P-201ENST00000516901 104 ntBASIC0.67□□□□□ -2.3
KRTAP4-4Q9BYR3 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.67□□□□□ -2.3
KRTAP4-4Q9BYR3 AP000676.1-201ENST00000533307 52 ntBASIC0.67□□□□□ -2.3
KRTAP4-4Q9BYR3 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC0.67□□□□□ -2.3
KRTAP4-4Q9BYR3 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC0.67□□□□□ -2.3
KRTAP4-4Q9BYR3 AC026271.5-201ENST00000577873 130 ntBASIC0.67□□□□□ -2.3
KRTAP4-4Q9BYR3 MIR5706-201ENST00000579841 80 ntBASIC0.67□□□□□ -2.3
KRTAP4-4Q9BYR3 AC019176.2-201ENST00000611579 315 ntBASIC0.67□□□□□ -2.3
KRTAP4-4Q9BYR3 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.67□□□□□ -2.3
KRTAP4-4Q9BYR3 SNORA70.25-201ENST00000612741 95 ntBASIC0.67□□□□□ -2.3
KRTAP4-4Q9BYR3 MIR6075-201ENST00000620782 95 ntBASIC0.67□□□□□ -2.3
KRTAP4-4Q9BYR3 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.67□□□□□ -2.3
KRTAP4-4Q9BYR3 MIR7843-201ENST00000622274 79 ntBASIC0.67□□□□□ -2.3
KRTAP4-4Q9BYR3 Y_RNA.830-201ENST00000628531 96 ntBASIC0.67□□□□□ -2.3
KRTAP4-4Q9BYR3 U6.105-201ENST00000637379 88 ntBASIC0.67□□□□□ -2.3
KRTAP4-4Q9BYR3 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
KRTAP4-4Q9BYR3 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
KRTAP4-4Q9BYR3 RNA5SP119-201ENST00000362715 117 ntBASIC0.66□□□□□ -2.3
KRTAP4-4Q9BYR3 RNU6-1034P-201ENST00000365335 101 ntBASIC0.66□□□□□ -2.3
KRTAP4-4Q9BYR3 Y_RNA.363-201ENST00000365529 113 ntBASIC0.66□□□□□ -2.3
KRTAP4-4Q9BYR3 RNU6-42P-201ENST00000384165 107 ntBASIC0.66□□□□□ -2.3
KRTAP4-4Q9BYR3 MIR607-201ENST00000385241 96 ntBASIC0.66□□□□□ -2.3
KRTAP4-4Q9BYR3 MIR921-201ENST00000401133 56 ntBASIC0.66□□□□□ -2.3
KRTAP4-4Q9BYR3 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.66□□□□□ -2.3
KRTAP4-4Q9BYR3 IFNWP4-201ENST00000453148 294 ntBASIC0.66□□□□□ -2.3
KRTAP4-4Q9BYR3 HMGN1P18-201ENST00000457642 277 ntBASIC0.66□□□□□ -2.3
KRTAP4-4Q9BYR3 RNVU1-2-201ENST00000516326 135 ntBASIC0.66□□□□□ -2.3
KRTAP4-4Q9BYR3 RNU2-58P-201ENST00000516403 183 ntBASIC0.66□□□□□ -2.3
KRTAP4-4Q9BYR3 SNORA74D-201ENST00000516404 141 ntBASIC0.66□□□□□ -2.3
KRTAP4-4Q9BYR3 AC026403.1-201ENST00000518938 295 ntBASIC0.66□□□□□ -2.3
KRTAP4-4Q9BYR3 CYP4A43P-201ENST00000568156 121 ntBASIC0.66□□□□□ -2.3
KRTAP4-4Q9BYR3 MIR3944-201ENST00000581277 108 ntBASIC0.66□□□□□ -2.3
KRTAP4-4Q9BYR3 U3.45-201ENST00000607547 219 ntBASIC0.66□□□□□ -2.3
KRTAP4-4Q9BYR3 AC006386.2-201ENST00000624491 75 ntBASIC0.66□□□□□ -2.3
KRTAP4-4Q9BYR3 AC012005.1-201ENST00000624575 75 ntBASIC0.66□□□□□ -2.3
KRTAP4-4Q9BYR3 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
KRTAP4-4Q9BYR3 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
KRTAP4-4Q9BYR3 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
KRTAP4-4Q9BYR3 Y_RNA.266-201ENST00000364678 96 ntBASIC0.65□□□□□ -2.31
KRTAP4-4Q9BYR3 RNU6-119P-201ENST00000364882 107 ntBASIC0.65□□□□□ -2.31
KRTAP4-4Q9BYR3 VTRNA1-3-201ENST00000365645 89 ntBASIC0.65□□□□□ -2.31
KRTAP4-4Q9BYR3 SNORA7.4-201ENST00000384249 137 ntBASIC0.65□□□□□ -2.31
KRTAP4-4Q9BYR3 Y_RNA.540-201ENST00000384638 111 ntBASIC0.65□□□□□ -2.31
KRTAP4-4Q9BYR3 MIR597-201ENST00000384968 97 ntBASIC0.65□□□□□ -2.31
KRTAP4-4Q9BYR3 MIR507-201ENST00000385234 94 ntBASIC0.65□□□□□ -2.31
KRTAP4-4Q9BYR3 MIR100-201ENST00000385259 80 ntBASIC0.65□□□□□ -2.31
KRTAP4-4Q9BYR3 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
KRTAP4-4Q9BYR3 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.65□□□□□ -2.31
KRTAP4-4Q9BYR3 MIR1251-201ENST00000408552 70 ntBASIC0.65□□□□□ -2.31
KRTAP4-4Q9BYR3 RNU6ATAC40P-201ENST00000408580 137 ntBASIC0.65□□□□□ -2.31
KRTAP4-4Q9BYR3 SNORA3C-201ENST00000408792 125 ntBASIC0.65□□□□□ -2.31
KRTAP4-4Q9BYR3 Y_RNA.612-201ENST00000410717 95 ntBASIC0.65□□□□□ -2.31
KRTAP4-4Q9BYR3 AL161935.2-201ENST00000414627 60 ntBASIC0.65□□□□□ -2.31
KRTAP4-4Q9BYR3 AC003685.2-201ENST00000422795 395 ntBASIC0.65□□□□□ -2.31
KRTAP4-4Q9BYR3 OR2A41P-201ENST00000473586 105 ntBASIC0.65□□□□□ -2.31
KRTAP4-4Q9BYR3 SNORD79.1-201ENST00000516069 84 ntBASIC0.65□□□□□ -2.31
KRTAP4-4Q9BYR3 RNU1-92P-201ENST00000517017 135 ntBASIC0.65□□□□□ -2.31
KRTAP4-4Q9BYR3 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC0.65□□□□□ -2.31
KRTAP4-4Q9BYR3 MIR4458-201ENST00000578872 75 ntBASIC0.65□□□□□ -2.31
KRTAP4-4Q9BYR3 MIR3936-201ENST00000584304 110 ntBASIC0.65□□□□□ -2.31
KRTAP4-4Q9BYR3 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC0.65□□□□□ -2.31
KRTAP4-4Q9BYR3 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
KRTAP4-4Q9BYR3 MIR7975-201ENST00000619350 68 ntBASIC0.65□□□□□ -2.31
KRTAP4-4Q9BYR3 XIST_intron.1-201ENST00000619444 68 ntBASIC0.65□□□□□ -2.31
KRTAP4-4Q9BYR3 AC140113.4-201ENST00000622087 222 ntBASIC0.65□□□□□ -2.31
KRTAP4-4Q9BYR3 uc_338.36-201ENST00000622331 158 ntBASIC0.65□□□□□ -2.31
KRTAP4-4Q9BYR3 MIR3651-201ENST00000630427 90 ntBASIC0.65□□□□□ -2.31
KRTAP4-4Q9BYR3 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
KRTAP4-4Q9BYR3 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
KRTAP4-4Q9BYR3 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
KRTAP4-4Q9BYR3 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
KRTAP4-4Q9BYR3 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC0.64□□□□□ -2.31
KRTAP4-4Q9BYR3 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC0.64□□□□□ -2.31
KRTAP4-4Q9BYR3 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
KRTAP4-4Q9BYR3 Y_RNA.284-201ENST00000364806 102 ntBASIC0.64□□□□□ -2.31
KRTAP4-4Q9BYR3 Y_RNA.514-201ENST00000384528 112 ntBASIC0.64□□□□□ -2.31
KRTAP4-4Q9BYR3 RNU6-851P-201ENST00000384565 107 ntBASIC0.64□□□□□ -2.31
KRTAP4-4Q9BYR3 MIR106A-201ENST00000384870 81 ntBASIC0.64□□□□□ -2.31
KRTAP4-4Q9BYR3 SNORD17-201ENST00000390930 237 ntBASIC0.64□□□□□ -2.31
KRTAP4-4Q9BYR3 MIR1261-201ENST00000408659 82 ntBASIC0.64□□□□□ -2.31
KRTAP4-4Q9BYR3 SNORD88.1-201ENST00000408684 91 ntBASIC0.64□□□□□ -2.31
KRTAP4-4Q9BYR3 RNA5SP39-201ENST00000411245 120 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms