Protein–RNA interactions for Protein: Q9BQ90

KLHDC3, Kelch domain-containing protein 3, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3Q9BQ90 RNU6-80P-201ENST00000384195 107 ntBASIC-0.73□□□□□ -2.53
KLHDC3Q9BQ90 Y_RNA.506-201ENST00000384494 102 ntBASIC-0.73□□□□□ -2.53
KLHDC3Q9BQ90 RNU6-813P-201ENST00000384691 107 ntBASIC-0.73□□□□□ -2.53
KLHDC3Q9BQ90 SNORA3B-201ENST00000391305 131 ntBASIC-0.73□□□□□ -2.53
KLHDC3Q9BQ90 snoU13.13-201ENST00000458842 104 ntBASIC-0.73□□□□□ -2.53
KLHDC3Q9BQ90 RNU6-971P-201ENST00000516920 106 ntBASIC-0.73□□□□□ -2.53
KLHDC3Q9BQ90 U6.95-201ENST00000636931 70 ntBASIC-0.73□□□□□ -2.53
KLHDC3Q9BQ90 SNORD42B-201ENST00000458893 67 ntBASIC-0.74□□□□□ -2.53
KLHDC3Q9BQ90 RNA5SP169-201ENST00000517268 117 ntBASIC-0.74□□□□□ -2.53
KLHDC3Q9BQ90 AC103810.7-201ENST00000607821 91 ntBASIC-0.74□□□□□ -2.53
KLHDC3Q9BQ90 SNORA63.2-201ENST00000362603 126 ntBASIC-0.75□□□□□ -2.53
KLHDC3Q9BQ90 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.75□□□□□ -2.53
KLHDC3Q9BQ90 MIR548A1-201ENST00000385041 97 ntBASIC-0.75□□□□□ -2.53
KLHDC3Q9BQ90 MIR204-201ENST00000385200 110 ntBASIC-0.75□□□□□ -2.53
KLHDC3Q9BQ90 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.75□□□□□ -2.53
KLHDC3Q9BQ90 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.75□□□□□ -2.53
KLHDC3Q9BQ90 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.75□□□□□ -2.53
KLHDC3Q9BQ90 SNORA13-201ENST00000458790 133 ntBASIC-0.75□□□□□ -2.53
KLHDC3Q9BQ90 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.75□□□□□ -2.53
KLHDC3Q9BQ90 SNORD33.1-201ENST00000516213 88 ntBASIC-0.75□□□□□ -2.53
KLHDC3Q9BQ90 RNU6-719P-201ENST00000516671 104 ntBASIC-0.75□□□□□ -2.53
KLHDC3Q9BQ90 RNU6-255P-201ENST00000516957 105 ntBASIC-0.75□□□□□ -2.53
KLHDC3Q9BQ90 RNU6-794P-201ENST00000517261 64 ntBASIC-0.75□□□□□ -2.53
KLHDC3Q9BQ90 MIR4280-201ENST00000582178 76 ntBASIC-0.75□□□□□ -2.53
KLHDC3Q9BQ90 MIR6851-201ENST00000617060 67 ntBASIC-0.75□□□□□ -2.53
KLHDC3Q9BQ90 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.76□□□□□ -2.53
KLHDC3Q9BQ90 RNU4-36P-201ENST00000364294 144 ntBASIC-0.76□□□□□ -2.53
KLHDC3Q9BQ90 RNU6-973P-201ENST00000364690 107 ntBASIC-0.76□□□□□ -2.53
KLHDC3Q9BQ90 RNU6-132P-201ENST00000383863 107 ntBASIC-0.76□□□□□ -2.53
KLHDC3Q9BQ90 MIR548A3-201ENST00000385297 97 ntBASIC-0.76□□□□□ -2.53
KLHDC3Q9BQ90 AL500527.2-201ENST00000454105 95 ntBASIC-0.76□□□□□ -2.53
KLHDC3Q9BQ90 AC021146.6-201ENST00000514659 117 ntBASIC-0.76□□□□□ -2.53
KLHDC3Q9BQ90 RNU6-346P-201ENST00000516288 111 ntBASIC-0.76□□□□□ -2.53
KLHDC3Q9BQ90 MIR378F-201ENST00000578143 78 ntBASIC-0.76□□□□□ -2.53
KLHDC3Q9BQ90 MIR3064-201ENST00000581130 66 ntBASIC-0.76□□□□□ -2.53
KLHDC3Q9BQ90 AC090425.1-201ENST00000610007 140 ntBASIC-0.76□□□□□ -2.53
KLHDC3Q9BQ90 AL078595.1-201ENST00000404458 226 ntBASIC-0.77□□□□□ -2.53
KLHDC3Q9BQ90 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.77□□□□□ -2.53
KLHDC3Q9BQ90 MIR3115-201ENST00000577915 68 ntBASIC-0.77□□□□□ -2.53
KLHDC3Q9BQ90 AC104996.3-201ENST00000590718 94 ntBASIC-0.77□□□□□ -2.53
KLHDC3Q9BQ90 MIR4320-201ENST00000636981 65 ntBASIC-0.77□□□□□ -2.53
KLHDC3Q9BQ90 RNU6-502P-201ENST00000362419 108 ntBASIC-0.78□□□□□ -2.53
KLHDC3Q9BQ90 RNA5SP331-201ENST00000364986 107 ntBASIC-0.78□□□□□ -2.53
KLHDC3Q9BQ90 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.78□□□□□ -2.53
KLHDC3Q9BQ90 SNORD4B-201ENST00000459083 72 ntBASIC-0.78□□□□□ -2.53
KLHDC3Q9BQ90 RNU6-659P-201ENST00000516454 104 ntBASIC-0.78□□□□□ -2.53
KLHDC3Q9BQ90 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.79□□□□□ -2.54
KLHDC3Q9BQ90 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.79□□□□□ -2.54
KLHDC3Q9BQ90 AC097510.1-201ENST00000510945 133 ntBASIC-0.79□□□□□ -2.54
KLHDC3Q9BQ90 RNU6-495P-201ENST00000362995 107 ntBASIC-0.8□□□□□ -2.54
KLHDC3Q9BQ90 RNA5SP192-201ENST00000364404 120 ntBASIC-0.8□□□□□ -2.54
KLHDC3Q9BQ90 SNORA63.6-201ENST00000364921 119 ntBASIC-0.8□□□□□ -2.54
KLHDC3Q9BQ90 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.8□□□□□ -2.54
KLHDC3Q9BQ90 RNU6-519P-201ENST00000410590 108 ntBASIC-0.8□□□□□ -2.54
KLHDC3Q9BQ90 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.8□□□□□ -2.54
KLHDC3Q9BQ90 RNU6-158P-201ENST00000517104 100 ntBASIC-0.8□□□□□ -2.54
KLHDC3Q9BQ90 RNU6-476P-201ENST00000384726 107 ntBASIC-0.81□□□□□ -2.54
KLHDC3Q9BQ90 RNU6-62P-201ENST00000516526 102 ntBASIC-0.81□□□□□ -2.54
KLHDC3Q9BQ90 SNORD38.3-201ENST00000516599 73 ntBASIC-0.81□□□□□ -2.54
KLHDC3Q9BQ90 MIR4777-201ENST00000583710 86 ntBASIC-0.81□□□□□ -2.54
KLHDC3Q9BQ90 MIR548Z-201ENST00000584743 97 ntBASIC-0.81□□□□□ -2.54
KLHDC3Q9BQ90 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.82□□□□□ -2.54
KLHDC3Q9BQ90 SNORA24B-201ENST00000384176 131 ntBASIC-0.82□□□□□ -2.54
KLHDC3Q9BQ90 RNU6-907P-201ENST00000390924 102 ntBASIC-0.82□□□□□ -2.54
KLHDC3Q9BQ90 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.82□□□□□ -2.54
KLHDC3Q9BQ90 RNU7-24P-201ENST00000458867 62 ntBASIC-0.82□□□□□ -2.54
KLHDC3Q9BQ90 RNU6-412P-201ENST00000516434 106 ntBASIC-0.82□□□□□ -2.54
KLHDC3Q9BQ90 MIR3140-201ENST00000583685 90 ntBASIC-0.82□□□□□ -2.54
KLHDC3Q9BQ90 SNORD114-25-201ENST00000363742 72 ntBASIC-0.83□□□□□ -2.54
KLHDC3Q9BQ90 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.83□□□□□ -2.54
KLHDC3Q9BQ90 RNU6-880P-201ENST00000384526 107 ntBASIC-0.83□□□□□ -2.54
KLHDC3Q9BQ90 MIR1468-201ENST00000410600 86 ntBASIC-0.83□□□□□ -2.54
KLHDC3Q9BQ90 MIR4499-201ENST00000584834 69 ntBASIC-0.83□□□□□ -2.54
KLHDC3Q9BQ90 MIR6773-201ENST00000612812 74 ntBASIC-0.83□□□□□ -2.54
KLHDC3Q9BQ90 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.84□□□□□ -2.54
KLHDC3Q9BQ90 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.84□□□□□ -2.54
KLHDC3Q9BQ90 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.84□□□□□ -2.54
KLHDC3Q9BQ90 MIR601-201ENST00000385256 79 ntBASIC-0.84□□□□□ -2.54
KLHDC3Q9BQ90 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.84□□□□□ -2.54
KLHDC3Q9BQ90 SNORD75.2-201ENST00000408784 58 ntBASIC-0.84□□□□□ -2.54
KLHDC3Q9BQ90 RNU6-795P-201ENST00000516323 103 ntBASIC-0.84□□□□□ -2.54
KLHDC3Q9BQ90 AC012531.4-201ENST00000616509 177 ntBASIC-0.84□□□□□ -2.54
KLHDC3Q9BQ90 SNORD116-14-201ENST00000383894 92 ntBASIC-0.85□□□□□ -2.55
KLHDC3Q9BQ90 SNORD116-17-201ENST00000383929 92 ntBASIC-0.85□□□□□ -2.55
KLHDC3Q9BQ90 SNORD116-15-201ENST00000384445 92 ntBASIC-0.85□□□□□ -2.55
KLHDC3Q9BQ90 SNORD116-19-201ENST00000384729 92 ntBASIC-0.85□□□□□ -2.55
KLHDC3Q9BQ90 MIR518B-201ENST00000385127 83 ntBASIC-0.85□□□□□ -2.55
KLHDC3Q9BQ90 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.85□□□□□ -2.55
KLHDC3Q9BQ90 uc_338.19-201ENST00000616808 99 ntBASIC-0.85□□□□□ -2.55
KLHDC3Q9BQ90 snoR1.1-201ENST00000628177 80 ntBASIC-0.85□□□□□ -2.55
KLHDC3Q9BQ90 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.86□□□□□ -2.55
KLHDC3Q9BQ90 RNU6-972P-201ENST00000391208 107 ntBASIC-0.86□□□□□ -2.55
KLHDC3Q9BQ90 MTATP6P29-201ENST00000415057 132 ntBASIC-0.86□□□□□ -2.55
KLHDC3Q9BQ90 MIR3165-201ENST00000579874 75 ntBASIC-0.86□□□□□ -2.55
KLHDC3Q9BQ90 MIR6854-201ENST00000614935 69 ntBASIC-0.86□□□□□ -2.55
KLHDC3Q9BQ90 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.87□□□□□ -2.55
KLHDC3Q9BQ90 MIRLET7B-201ENST00000385140 83 ntBASIC-0.87□□□□□ -2.55
KLHDC3Q9BQ90 RNA5SP292-201ENST00000390974 118 ntBASIC-0.87□□□□□ -2.55
KLHDC3Q9BQ90 RNU6-274P-201ENST00000459566 107 ntBASIC-0.87□□□□□ -2.55
KLHDC3Q9BQ90 SCARNA23-201ENST00000516060 130 ntBASIC-0.87□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms