Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.2
SYNGAP1Q96PV0 SNORD18A-201ENST00000363753 72 ntBASIC1.28□□□□□ -2.2
SYNGAP1Q96PV0 MIR19B1-201ENST00000384829 87 ntBASIC1.28□□□□□ -2.2
SYNGAP1Q96PV0 MIR573-201ENST00000384964 99 ntBASIC1.28□□□□□ -2.2
SYNGAP1Q96PV0 SNORD114-24-201ENST00000365029 72 ntBASIC1.27□□□□□ -2.21
SYNGAP1Q96PV0 SNORD115-31-201ENST00000365318 82 ntBASIC1.27□□□□□ -2.21
SYNGAP1Q96PV0 SNORD45A-201ENST00000384512 84 ntBASIC1.27□□□□□ -2.21
SYNGAP1Q96PV0 MIR203A-201ENST00000384836 110 ntBASIC1.27□□□□□ -2.21
SYNGAP1Q96PV0 RNU6-663P-201ENST00000391105 106 ntBASIC1.27□□□□□ -2.21
SYNGAP1Q96PV0 MIR1285-1-201ENST00000408593 84 ntBASIC1.27□□□□□ -2.21
SYNGAP1Q96PV0 MIR6513-201ENST00000621188 64 ntBASIC1.27□□□□□ -2.21
SYNGAP1Q96PV0 RNU6-54P-201ENST00000365563 107 ntBASIC1.26□□□□□ -2.21
SYNGAP1Q96PV0 RNU6V-201ENST00000384105 107 ntBASIC1.26□□□□□ -2.21
SYNGAP1Q96PV0 MIR1265-201ENST00000408444 86 ntBASIC1.26□□□□□ -2.21
SYNGAP1Q96PV0 SNORD99-201ENST00000408612 74 ntBASIC1.26□□□□□ -2.21
SYNGAP1Q96PV0 RNU6-539P-201ENST00000516665 103 ntBASIC1.26□□□□□ -2.21
SYNGAP1Q96PV0 MIR4460-201ENST00000577862 86 ntBASIC1.26□□□□□ -2.21
SYNGAP1Q96PV0 RNU6-540P-201ENST00000384622 101 ntBASIC1.25□□□□□ -2.21
SYNGAP1Q96PV0 RNU6ATAC4P-201ENST00000387446 126 ntBASIC1.25□□□□□ -2.21
SYNGAP1Q96PV0 RNU6-604P-201ENST00000390917 100 ntBASIC1.25□□□□□ -2.21
SYNGAP1Q96PV0 RNA5SP404-201ENST00000517118 132 ntBASIC1.25□□□□□ -2.21
SYNGAP1Q96PV0 MIR6509-201ENST00000614603 85 ntBASIC1.25□□□□□ -2.21
SYNGAP1Q96PV0 RNU6-590P-201ENST00000365039 107 ntBASIC1.24□□□□□ -2.21
SYNGAP1Q96PV0 SNORD75.2-201ENST00000408784 58 ntBASIC1.24□□□□□ -2.21
SYNGAP1Q96PV0 AC125388.1-201ENST00000459631 156 ntBASIC1.24□□□□□ -2.21
SYNGAP1Q96PV0 Y_RNA.340-201ENST00000365330 92 ntBASIC1.23□□□□□ -2.21
SYNGAP1Q96PV0 MIR8053-201ENST00000613344 75 ntBASIC1.23□□□□□ -2.21
SYNGAP1Q96PV0 MIR618-201ENST00000385287 98 ntBASIC1.22□□□□□ -2.21
SYNGAP1Q96PV0 MIR936-201ENST00000401264 98 ntBASIC1.22□□□□□ -2.21
SYNGAP1Q96PV0 RNA5SP222-201ENST00000411039 105 ntBASIC1.22□□□□□ -2.21
SYNGAP1Q96PV0 RNA5SP227-201ENST00000516184 113 ntBASIC1.22□□□□□ -2.21
SYNGAP1Q96PV0 RNU6-752P-201ENST00000516376 102 ntBASIC1.22□□□□□ -2.21
SYNGAP1Q96PV0 RNU6-881P-201ENST00000516813 102 ntBASIC1.22□□□□□ -2.21
SYNGAP1Q96PV0 RNA5SP47-201ENST00000517230 109 ntBASIC1.22□□□□□ -2.21
SYNGAP1Q96PV0 MIR548O2-201ENST00000616090 70 ntBASIC1.22□□□□□ -2.21
SYNGAP1Q96PV0 RNU6-726P-201ENST00000364680 107 ntBASIC1.21□□□□□ -2.22
SYNGAP1Q96PV0 MIR1197-201ENST00000408818 88 ntBASIC1.21□□□□□ -2.22
SYNGAP1Q96PV0 RNA5SP255-201ENST00000516370 107 ntBASIC1.21□□□□□ -2.22
SYNGAP1Q96PV0 RNA5SP285-201ENST00000516619 119 ntBASIC1.21□□□□□ -2.22
SYNGAP1Q96PV0 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.21□□□□□ -2.22
SYNGAP1Q96PV0 RNU6-495P-201ENST00000362995 107 ntBASIC1.2□□□□□ -2.22
SYNGAP1Q96PV0 SNORD41.1-201ENST00000391000 69 ntBASIC1.2□□□□□ -2.22
SYNGAP1Q96PV0 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
SYNGAP1Q96PV0 SNORD115-22-201ENST00000364456 82 ntBASIC1.19□□□□□ -2.22
SYNGAP1Q96PV0 RNU6-1039P-201ENST00000383931 107 ntBASIC1.19□□□□□ -2.22
SYNGAP1Q96PV0 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
SYNGAP1Q96PV0 snoU13.19-201ENST00000459148 104 ntBASIC1.19□□□□□ -2.22
SYNGAP1Q96PV0 RNU5B-6P-201ENST00000516765 68 ntBASIC1.19□□□□□ -2.22
SYNGAP1Q96PV0 SCARNA16.5-201ENST00000517114 183 ntBASIC1.19□□□□□ -2.22
SYNGAP1Q96PV0 U6.111-201ENST00000636093 83 ntBASIC1.19□□□□□ -2.22
SYNGAP1Q96PV0 MIR18A-201ENST00000362310 71 ntBASIC1.18□□□□□ -2.22
SYNGAP1Q96PV0 RNU6-269P-201ENST00000391077 97 ntBASIC1.18□□□□□ -2.22
SYNGAP1Q96PV0 SNORD114-21-201ENST00000606412 72 ntBASIC1.18□□□□□ -2.22
SYNGAP1Q96PV0 MIR2909-201ENST00000617113 69 ntBASIC1.18□□□□□ -2.22
SYNGAP1Q96PV0 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
SYNGAP1Q96PV0 RNU6-800P-201ENST00000384473 103 ntBASIC1.17□□□□□ -2.22
SYNGAP1Q96PV0 MIR6857-201ENST00000613267 93 ntBASIC1.17□□□□□ -2.22
SYNGAP1Q96PV0 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
SYNGAP1Q96PV0 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
SYNGAP1Q96PV0 SNORD113.1-201ENST00000363280 73 ntBASIC1.16□□□□□ -2.22
SYNGAP1Q96PV0 RNU1-141P-201ENST00000364623 158 ntBASIC1.16□□□□□ -2.22
SYNGAP1Q96PV0 RNU6-630P-201ENST00000391258 106 ntBASIC1.16□□□□□ -2.22
SYNGAP1Q96PV0 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.16□□□□□ -2.22
SYNGAP1Q96PV0 RNA5SP147-201ENST00000516493 109 ntBASIC1.16□□□□□ -2.22
SYNGAP1Q96PV0 RNU6-1216P-201ENST00000362590 107 ntBASIC1.15□□□□□ -2.22
SYNGAP1Q96PV0 RNU1-124P-201ENST00000363861 145 ntBASIC1.15□□□□□ -2.22
SYNGAP1Q96PV0 SNORA36.2-201ENST00000384004 127 ntBASIC1.15□□□□□ -2.22
SYNGAP1Q96PV0 MT-TY-201ENST00000387409 66 ntBASIC1.15□□□□□ -2.22
SYNGAP1Q96PV0 RNA5SP484-201ENST00000458857 111 ntBASIC1.15□□□□□ -2.22
SYNGAP1Q96PV0 RNU7-24P-201ENST00000458867 62 ntBASIC1.15□□□□□ -2.22
SYNGAP1Q96PV0 SNORD42B-201ENST00000458893 67 ntBASIC1.15□□□□□ -2.22
SYNGAP1Q96PV0 MIR4714-201ENST00000580728 77 ntBASIC1.15□□□□□ -2.22
SYNGAP1Q96PV0 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.15□□□□□ -2.22
SYNGAP1Q96PV0 RNU4-38P-201ENST00000364472 129 ntBASIC1.15□□□□□ -2.23
SYNGAP1Q96PV0 MIR532-201ENST00000385025 91 ntBASIC1.15□□□□□ -2.23
SYNGAP1Q96PV0 RNA5SP268-201ENST00000516828 124 ntBASIC1.15□□□□□ -2.23
SYNGAP1Q96PV0 RNU6-982P-201ENST00000516216 102 ntBASIC1.14□□□□□ -2.23
SYNGAP1Q96PV0 RNU6-260P-201ENST00000384092 107 ntBASIC1.13□□□□□ -2.23
SYNGAP1Q96PV0 SNORA8.2-201ENST00000384372 139 ntBASIC1.13□□□□□ -2.23
SYNGAP1Q96PV0 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.13□□□□□ -2.23
SYNGAP1Q96PV0 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.13□□□□□ -2.23
SYNGAP1Q96PV0 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
SYNGAP1Q96PV0 AC093423.1-201ENST00000440817 142 ntBASIC1.12□□□□□ -2.23
SYNGAP1Q96PV0 MIR3657-201ENST00000584818 117 ntBASIC1.12□□□□□ -2.23
SYNGAP1Q96PV0 AC103810.9-201ENST00000606688 112 ntBASIC1.12□□□□□ -2.23
SYNGAP1Q96PV0 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.11□□□□□ -2.23
SYNGAP1Q96PV0 RNA5SP94-201ENST00000516917 108 ntBASIC1.11□□□□□ -2.23
SYNGAP1Q96PV0 RNU6-990P-201ENST00000364385 104 ntBASIC1.1□□□□□ -2.23
SYNGAP1Q96PV0 AC006210.1-201ENST00000424882 111 ntBASIC1.1□□□□□ -2.23
SYNGAP1Q96PV0 MTND4LP1-201ENST00000446263 157 ntBASIC1.1□□□□□ -2.23
SYNGAP1Q96PV0 MIR3973-201ENST00000579824 107 ntBASIC1.1□□□□□ -2.23
SYNGAP1Q96PV0 MIR4473-201ENST00000583731 91 ntBASIC1.1□□□□□ -2.23
SYNGAP1Q96PV0 SNORA36.1-201ENST00000363424 132 ntBASIC1.09□□□□□ -2.24
SYNGAP1Q96PV0 SNORD114-4-201ENST00000363962 75 ntBASIC1.09□□□□□ -2.24
SYNGAP1Q96PV0 RNU6-668P-201ENST00000364180 107 ntBASIC1.09□□□□□ -2.24
SYNGAP1Q96PV0 RNU4-45P-201ENST00000365469 141 ntBASIC1.09□□□□□ -2.24
SYNGAP1Q96PV0 Y_RNA.443-201ENST00000384135 111 ntBASIC1.09□□□□□ -2.24
SYNGAP1Q96PV0 AC018659.1-201ENST00000551083 169 ntBASIC1.09□□□□□ -2.24
SYNGAP1Q96PV0 MIR4723-201ENST00000585070 81 ntBASIC1.09□□□□□ -2.24
SYNGAP1Q96PV0 RNA5SP193-201ENST00000410353 107 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 614.1 ms