Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 RNU6-24P-201ENST00000384440 107 ntBASIC-1.4□□□□□ -2.63
RPRD1AQ96P16 SCARNA18B-201ENST00000458806 135 ntBASIC-1.4□□□□□ -2.63
RPRD1AQ96P16 SCARNA15.1-201ENST00000516384 125 ntBASIC-1.4□□□□□ -2.63
RPRD1AQ96P16 MIR3613-201ENST00000579844 87 ntBASIC-1.4□□□□□ -2.63
RPRD1AQ96P16 AC004792.1-201ENST00000614523 137 ntBASIC-1.4□□□□□ -2.63
RPRD1AQ96P16 SNORA24B-201ENST00000384176 131 ntBASIC-1.41□□□□□ -2.64
RPRD1AQ96P16 MIR147A-201ENST00000385079 72 ntBASIC-1.41□□□□□ -2.64
RPRD1AQ96P16 MIR548U-201ENST00000390728 81 ntBASIC-1.41□□□□□ -2.64
RPRD1AQ96P16 SNORD57-201ENST00000448188 72 ntBASIC-1.41□□□□□ -2.64
RPRD1AQ96P16 RNA5SP272-201ENST00000516095 111 ntBASIC-1.41□□□□□ -2.64
RPRD1AQ96P16 AC140658.3-201ENST00000567603 271 ntBASIC-1.41□□□□□ -2.64
RPRD1AQ96P16 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.42□□□□□ -2.64
RPRD1AQ96P16 RNU6-379P-201ENST00000363813 104 ntBASIC-1.42□□□□□ -2.64
RPRD1AQ96P16 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.42□□□□□ -2.64
RPRD1AQ96P16 Y_RNA.700-201ENST00000516806 100 ntBASIC-1.42□□□□□ -2.64
RPRD1AQ96P16 AC068339.1-201ENST00000526965 141 ntBASIC-1.42□□□□□ -2.64
RPRD1AQ96P16 AC104996.3-201ENST00000590718 94 ntBASIC-1.42□□□□□ -2.64
RPRD1AQ96P16 MIR382-201ENST00000637119 76 ntBASIC-1.42□□□□□ -2.64
RPRD1AQ96P16 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.43□□□□□ -2.64
RPRD1AQ96P16 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.43□□□□□ -2.64
RPRD1AQ96P16 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.43□□□□□ -2.64
RPRD1AQ96P16 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.43□□□□□ -2.64
RPRD1AQ96P16 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.43□□□□□ -2.64
RPRD1AQ96P16 MIR3144-201ENST00000579460 79 ntBASIC-1.43□□□□□ -2.64
RPRD1AQ96P16 MIR4439-201ENST00000583746 80 ntBASIC-1.43□□□□□ -2.64
RPRD1AQ96P16 RNU6-694P-201ENST00000364071 147 ntBASIC-1.44□□□□□ -2.64
RPRD1AQ96P16 RNU6-463P-201ENST00000384340 107 ntBASIC-1.44□□□□□ -2.64
RPRD1AQ96P16 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.44□□□□□ -2.64
RPRD1AQ96P16 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-1.44□□□□□ -2.64
RPRD1AQ96P16 AC021146.9-201ENST00000512503 156 ntBASIC-1.44□□□□□ -2.64
RPRD1AQ96P16 MIR4679-2-201ENST00000578358 77 ntBASIC-1.44□□□□□ -2.64
RPRD1AQ96P16 SNORD75.2-201ENST00000408784 58 ntBASIC-1.45□□□□□ -2.64
RPRD1AQ96P16 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.46□□□□□ -2.64
RPRD1AQ96P16 RNU6-644P-201ENST00000391155 98 ntBASIC-1.46□□□□□ -2.64
RPRD1AQ96P16 RNU7-24P-201ENST00000458867 62 ntBASIC-1.46□□□□□ -2.64
RPRD1AQ96P16 SNORD4B-201ENST00000459083 72 ntBASIC-1.46□□□□□ -2.64
RPRD1AQ96P16 SNORD18.2-201ENST00000459604 70 ntBASIC-1.46□□□□□ -2.64
RPRD1AQ96P16 RNU6-772P-201ENST00000516042 105 ntBASIC-1.46□□□□□ -2.64
RPRD1AQ96P16 RNU6-388P-201ENST00000517012 105 ntBASIC-1.46□□□□□ -2.64
RPRD1AQ96P16 RNU6-389P-201ENST00000517048 105 ntBASIC-1.46□□□□□ -2.64
RPRD1AQ96P16 AC103810.7-201ENST00000607821 91 ntBASIC-1.46□□□□□ -2.64
RPRD1AQ96P16 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.47□□□□□ -2.64
RPRD1AQ96P16 SNORD45B-201ENST00000364617 72 ntBASIC-1.47□□□□□ -2.64
RPRD1AQ96P16 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.47□□□□□ -2.64
RPRD1AQ96P16 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.47□□□□□ -2.64
RPRD1AQ96P16 RNU6-426P-201ENST00000516464 97 ntBASIC-1.47□□□□□ -2.64
RPRD1AQ96P16 MIR3115-201ENST00000577915 68 ntBASIC-1.47□□□□□ -2.64
RPRD1AQ96P16 MIR4306-201ENST00000583390 91 ntBASIC-1.47□□□□□ -2.64
RPRD1AQ96P16 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.48□□□□□ -2.65
RPRD1AQ96P16 RNA5SP192-201ENST00000364404 120 ntBASIC-1.48□□□□□ -2.65
RPRD1AQ96P16 RNU6-813P-201ENST00000384691 107 ntBASIC-1.48□□□□□ -2.65
RPRD1AQ96P16 YWHAEP3-201ENST00000582767 121 ntBASIC-1.48□□□□□ -2.65
RPRD1AQ96P16 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.48□□□□□ -2.65
RPRD1AQ96P16 U6.96-201ENST00000636425 70 ntBASIC-1.48□□□□□ -2.65
RPRD1AQ96P16 SNORA62.4-201ENST00000365504 151 ntBASIC-1.49□□□□□ -2.65
RPRD1AQ96P16 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.49□□□□□ -2.65
RPRD1AQ96P16 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.5□□□□□ -2.65
RPRD1AQ96P16 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.5□□□□□ -2.65
RPRD1AQ96P16 MIR124-2-201ENST00000385081 109 ntBASIC-1.5□□□□□ -2.65
RPRD1AQ96P16 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.5□□□□□ -2.65
RPRD1AQ96P16 MTND5P41-201ENST00000517498 206 ntBASIC-1.5□□□□□ -2.65
RPRD1AQ96P16 AC090617.8-201ENST00000623339 167 ntBASIC-1.5□□□□□ -2.65
RPRD1AQ96P16 AL157777.2-201ENST00000258070 137 ntBASIC-1.51□□□□□ -2.65
RPRD1AQ96P16 RNU6-208P-201ENST00000362431 107 ntBASIC-1.51□□□□□ -2.65
RPRD1AQ96P16 MIR548A1-201ENST00000385041 97 ntBASIC-1.51□□□□□ -2.65
RPRD1AQ96P16 RNA5SP292-201ENST00000390974 118 ntBASIC-1.51□□□□□ -2.65
RPRD1AQ96P16 SNORD90-201ENST00000391145 111 ntBASIC-1.51□□□□□ -2.65
RPRD1AQ96P16 MTND4LP9-201ENST00000427694 174 ntBASIC-1.51□□□□□ -2.65
RPRD1AQ96P16 MIR3165-201ENST00000579874 75 ntBASIC-1.51□□□□□ -2.65
RPRD1AQ96P16 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.52□□□□□ -2.65
RPRD1AQ96P16 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.52□□□□□ -2.65
RPRD1AQ96P16 RNU6-519P-201ENST00000410590 108 ntBASIC-1.52□□□□□ -2.65
RPRD1AQ96P16 RNU6-62P-201ENST00000516526 102 ntBASIC-1.52□□□□□ -2.65
RPRD1AQ96P16 MIR548Z-201ENST00000584743 97 ntBASIC-1.52□□□□□ -2.65
RPRD1AQ96P16 SNORD114-17-201ENST00000364699 75 ntBASIC-1.54□□□□□ -2.66
RPRD1AQ96P16 MIR5009-201ENST00000578736 100 ntBASIC-1.54□□□□□ -2.66
RPRD1AQ96P16 MIR4464-201ENST00000580818 92 ntBASIC-1.54□□□□□ -2.66
RPRD1AQ96P16 AL353803.5-201ENST00000599815 141 ntBASIC-1.54□□□□□ -2.66
RPRD1AQ96P16 RNU6-382P-201ENST00000365181 106 ntBASIC-1.55□□□□□ -2.66
RPRD1AQ96P16 RNU4-32P-201ENST00000363404 141 ntBASIC-1.56□□□□□ -2.66
RPRD1AQ96P16 snoU13.17-201ENST00000458802 104 ntBASIC-1.56□□□□□ -2.66
RPRD1AQ96P16 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.56□□□□□ -2.66
RPRD1AQ96P16 SNORA18.5-201ENST00000516616 101 ntBASIC-1.56□□□□□ -2.66
RPRD1AQ96P16 MIR4777-201ENST00000583710 86 ntBASIC-1.56□□□□□ -2.66
RPRD1AQ96P16 AC006254.2-201ENST00000603259 279 ntBASIC-1.56□□□□□ -2.66
RPRD1AQ96P16 snoU83B.1-201ENST00000517136 88 ntBASIC-1.57□□□□□ -2.66
RPRD1AQ96P16 MIR4320-201ENST00000636981 65 ntBASIC-1.57□□□□□ -2.66
RPRD1AQ96P16 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.58□□□□□ -2.66
RPRD1AQ96P16 MT-TG-201ENST00000387429 68 ntBASIC-1.58□□□□□ -2.66
RPRD1AQ96P16 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.58□□□□□ -2.66
RPRD1AQ96P16 SNX3P1X-201ENST00000414887 175 ntBASIC-1.58□□□□□ -2.66
RPRD1AQ96P16 MTATP6P29-201ENST00000415057 132 ntBASIC-1.58□□□□□ -2.66
RPRD1AQ96P16 RNU7-107P-201ENST00000459121 61 ntBASIC-1.58□□□□□ -2.66
RPRD1AQ96P16 AL353621.2-201ENST00000605340 133 ntBASIC-1.58□□□□□ -2.66
RPRD1AQ96P16 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.59□□□□□ -2.66
RPRD1AQ96P16 RNU6-260P-201ENST00000384092 107 ntBASIC-1.59□□□□□ -2.66
RPRD1AQ96P16 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.59□□□□□ -2.66
RPRD1AQ96P16 RNU6-795P-201ENST00000516323 103 ntBASIC-1.59□□□□□ -2.66
RPRD1AQ96P16 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.6□□□□□ -2.67
RPRD1AQ96P16 SNORA40-201ENST00000388090 126 ntBASIC-1.6□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms