Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 RNA5SP484-201ENST00000458857 111 ntBASIC1.24□□□□□ -2.21
IFT43Q96FT9 RNU5B-6P-201ENST00000516765 68 ntBASIC1.24□□□□□ -2.21
IFT43Q96FT9 AL353765.1-201ENST00000605514 183 ntBASIC1.23□□□□□ -2.21
IFT43Q96FT9 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
IFT43Q96FT9 SNORA36.1-201ENST00000363424 132 ntBASIC1.22□□□□□ -2.21
IFT43Q96FT9 RNU6-645P-201ENST00000364649 106 ntBASIC1.22□□□□□ -2.21
IFT43Q96FT9 RNA5SP222-201ENST00000411039 105 ntBASIC1.22□□□□□ -2.21
IFT43Q96FT9 RNA5SP268-201ENST00000516828 124 ntBASIC1.22□□□□□ -2.21
IFT43Q96FT9 Y_RNA.250-201ENST00000364542 110 ntBASIC1.21□□□□□ -2.22
IFT43Q96FT9 RNA5SP94-201ENST00000516917 108 ntBASIC1.21□□□□□ -2.22
IFT43Q96FT9 MIR4661-201ENST00000582720 75 ntBASIC1.21□□□□□ -2.22
IFT43Q96FT9 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.2□□□□□ -2.22
IFT43Q96FT9 Y_RNA.355-201ENST00000365462 98 ntBASIC1.2□□□□□ -2.22
IFT43Q96FT9 MIR1285-1-201ENST00000408593 84 ntBASIC1.2□□□□□ -2.22
IFT43Q96FT9 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.2□□□□□ -2.22
IFT43Q96FT9 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.2□□□□□ -2.22
IFT43Q96FT9 AC018659.1-201ENST00000551083 169 ntBASIC1.2□□□□□ -2.22
IFT43Q96FT9 MIR4452-201ENST00000583004 71 ntBASIC1.2□□□□□ -2.22
IFT43Q96FT9 Y_RNA.224-201ENST00000364308 111 ntBASIC1.19□□□□□ -2.22
IFT43Q96FT9 RNU6-990P-201ENST00000364385 104 ntBASIC1.19□□□□□ -2.22
IFT43Q96FT9 RNU6-1187P-201ENST00000364771 110 ntBASIC1.19□□□□□ -2.22
IFT43Q96FT9 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.19□□□□□ -2.22
IFT43Q96FT9 MIR6739-201ENST00000622461 75 ntBASIC1.19□□□□□ -2.22
IFT43Q96FT9 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.18□□□□□ -2.22
IFT43Q96FT9 RNA5SP147-201ENST00000516493 109 ntBASIC1.18□□□□□ -2.22
IFT43Q96FT9 SNORA40.17-201ENST00000517256 115 ntBASIC1.18□□□□□ -2.22
IFT43Q96FT9 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.18□□□□□ -2.22
IFT43Q96FT9 MIR9-2-201ENST00000384838 87 ntBASIC1.17□□□□□ -2.22
IFT43Q96FT9 RNU6-542P-201ENST00000516405 103 ntBASIC1.17□□□□□ -2.22
IFT43Q96FT9 Y_RNA.375-201ENST00000365625 101 ntBASIC1.16□□□□□ -2.22
IFT43Q96FT9 Y_RNA.407-201ENST00000383986 113 ntBASIC1.16□□□□□ -2.22
IFT43Q96FT9 AC006210.1-201ENST00000424882 111 ntBASIC1.16□□□□□ -2.22
IFT43Q96FT9 MIR7107-201ENST00000611489 80 ntBASIC1.16□□□□□ -2.22
IFT43Q96FT9 AL109933.3-201ENST00000619095 188 ntBASIC1.16□□□□□ -2.22
IFT43Q96FT9 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
IFT43Q96FT9 RNU6-1162P-201ENST00000384443 104 ntBASIC1.15□□□□□ -2.23
IFT43Q96FT9 SNORD110-201ENST00000408189 75 ntBASIC1.15□□□□□ -2.23
IFT43Q96FT9 RNU6-656P-201ENST00000516785 107 ntBASIC1.15□□□□□ -2.23
IFT43Q96FT9 RNU1-93P-201ENST00000364704 169 ntBASIC1.14□□□□□ -2.23
IFT43Q96FT9 SNORD114-22-201ENST00000365423 72 ntBASIC1.14□□□□□ -2.23
IFT43Q96FT9 AC110620.1-201ENST00000416042 228 ntBASIC1.14□□□□□ -2.23
IFT43Q96FT9 snoU13.18-201ENST00000459483 104 ntBASIC1.14□□□□□ -2.23
IFT43Q96FT9 AC087343.1-201ENST00000477341 475 ntBASIC1.14□□□□□ -2.23
IFT43Q96FT9 MIR4295-201ENST00000585286 85 ntBASIC1.14□□□□□ -2.23
IFT43Q96FT9 RNA5SP215-201ENST00000363440 122 ntBASIC1.13□□□□□ -2.23
IFT43Q96FT9 SNORA36.2-201ENST00000384004 127 ntBASIC1.13□□□□□ -2.23
IFT43Q96FT9 SCARNA17.3-201ENST00000516381 125 ntBASIC1.13□□□□□ -2.23
IFT43Q96FT9 AC103810.9-201ENST00000606688 112 ntBASIC1.13□□□□□ -2.23
IFT43Q96FT9 MIR96-201ENST00000362288 78 ntBASIC1.12□□□□□ -2.23
IFT43Q96FT9 RNU6-669P-201ENST00000365575 107 ntBASIC1.12□□□□□ -2.23
IFT43Q96FT9 MIR521-2-201ENST00000384818 87 ntBASIC1.12□□□□□ -2.23
IFT43Q96FT9 MIR608-201ENST00000384820 100 ntBASIC1.12□□□□□ -2.23
IFT43Q96FT9 OR2A41P-201ENST00000473586 105 ntBASIC1.12□□□□□ -2.23
IFT43Q96FT9 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
IFT43Q96FT9 MIR652-201ENST00000385278 98 ntBASIC1.11□□□□□ -2.23
IFT43Q96FT9 MIR7111-201ENST00000619751 72 ntBASIC1.11□□□□□ -2.23
IFT43Q96FT9 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
IFT43Q96FT9 RNA5SP220-201ENST00000516298 104 ntBASIC1.1□□□□□ -2.23
IFT43Q96FT9 RNU6-1089P-201ENST00000516473 104 ntBASIC1.1□□□□□ -2.23
IFT43Q96FT9 Y_RNA.118-201ENST00000363300 101 ntBASIC1.09□□□□□ -2.23
IFT43Q96FT9 RNY1P8-201ENST00000383970 114 ntBASIC1.09□□□□□ -2.23
IFT43Q96FT9 SNORA15B-2-201ENST00000384058 135 ntBASIC1.09□□□□□ -2.23
IFT43Q96FT9 SNORA15B-1-201ENST00000384334 135 ntBASIC1.09□□□□□ -2.23
IFT43Q96FT9 MIR140-201ENST00000385282 100 ntBASIC1.09□□□□□ -2.23
IFT43Q96FT9 AC021146.9-201ENST00000512503 156 ntBASIC1.09□□□□□ -2.23
IFT43Q96FT9 MIR4473-201ENST00000583731 91 ntBASIC1.09□□□□□ -2.23
IFT43Q96FT9 RNA5SP517-201ENST00000364724 117 ntBASIC1.08□□□□□ -2.24
IFT43Q96FT9 RNU6-42P-201ENST00000384165 107 ntBASIC1.08□□□□□ -2.24
IFT43Q96FT9 MIR5706-201ENST00000579841 80 ntBASIC1.08□□□□□ -2.24
IFT43Q96FT9 uc_338.10-201ENST00000621872 182 ntBASIC1.08□□□□□ -2.24
IFT43Q96FT9 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
IFT43Q96FT9 RNU6-499P-201ENST00000365615 107 ntBASIC1.07□□□□□ -2.24
IFT43Q96FT9 snoU13.13-201ENST00000458842 104 ntBASIC1.07□□□□□ -2.24
IFT43Q96FT9 AC092634.7-201ENST00000621022 103 ntBASIC1.07□□□□□ -2.24
IFT43Q96FT9 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.07□□□□□ -2.24
IFT43Q96FT9 RNU6-302P-201ENST00000365249 107 ntBASIC1.06□□□□□ -2.24
IFT43Q96FT9 Y_RNA.633-201ENST00000459107 95 ntBASIC1.06□□□□□ -2.24
IFT43Q96FT9 ACA64.5-201ENST00000516207 127 ntBASIC1.06□□□□□ -2.24
IFT43Q96FT9 MIR548AE1-201ENST00000583292 70 ntBASIC1.06□□□□□ -2.24
IFT43Q96FT9 SNORD114-21-201ENST00000606412 72 ntBASIC1.06□□□□□ -2.24
IFT43Q96FT9 SNORA70.25-201ENST00000612741 95 ntBASIC1.06□□□□□ -2.24
IFT43Q96FT9 SNORA63.6-201ENST00000364921 119 ntBASIC1.05□□□□□ -2.24
IFT43Q96FT9 RNA5SP299-201ENST00000391203 116 ntBASIC1.05□□□□□ -2.24
IFT43Q96FT9 MIR489-201ENST00000384923 84 ntBASIC1.04□□□□□ -2.24
IFT43Q96FT9 AL157398.1-201ENST00000452981 186 ntBASIC1.04□□□□□ -2.24
IFT43Q96FT9 MIR4752-201ENST00000579672 72 ntBASIC1.04□□□□□ -2.24
IFT43Q96FT9 MIR6767-201ENST00000637302 66 ntBASIC1.04□□□□□ -2.24
IFT43Q96FT9 SNORD114-27-201ENST00000363766 70 ntBASIC1.03□□□□□ -2.24
IFT43Q96FT9 SNORA25.5-201ENST00000363782 126 ntBASIC1.03□□□□□ -2.24
IFT43Q96FT9 MIR520E-201ENST00000384867 87 ntBASIC1.03□□□□□ -2.24
IFT43Q96FT9 SCARNA21.1-201ENST00000515996 128 ntBASIC1.03□□□□□ -2.24
IFT43Q96FT9 MIR6857-201ENST00000613267 93 ntBASIC1.03□□□□□ -2.24
IFT43Q96FT9 RNU6-110P-201ENST00000384508 104 ntBASIC1.02□□□□□ -2.25
IFT43Q96FT9 AC069271.1-201ENST00000445577 156 ntBASIC1.02□□□□□ -2.25
IFT43Q96FT9 AC211469.2-201ENST00000605461 205 ntBASIC1.02□□□□□ -2.25
IFT43Q96FT9 MIR548E-201ENST00000408287 88 ntBASIC1.01□□□□□ -2.25
IFT43Q96FT9 SNORA25.18-201ENST00000607153 114 ntBASIC1.01□□□□□ -2.25
IFT43Q96FT9 U7.6-201ENST00000610841 64 ntBASIC1.01□□□□□ -2.25
IFT43Q96FT9 MIR6788-201ENST00000618842 66 ntBASIC1.01□□□□□ -2.25
IFT43Q96FT9 SNORD118-201ENST00000363593 134 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 182.4 ms