Protein–RNA interactions for Protein: Q6Q0C0

TRAF7, E3 ubiquitin-protein ligase TRAF7, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF7Q6Q0C0 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
TRAF7Q6Q0C0 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
TRAF7Q6Q0C0 RNA5SP338-201ENST00000410495 85 ntBASIC2.1□□□□□ -2.07
TRAF7Q6Q0C0 RNA5SP247-201ENST00000411181 105 ntBASIC2.1□□□□□ -2.07
TRAF7Q6Q0C0 AL096840.1-201ENST00000603287 93 ntBASIC2.1□□□□□ -2.07
TRAF7Q6Q0C0 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
TRAF7Q6Q0C0 SNORD111-201ENST00000408139 94 ntBASIC2.09□□□□□ -2.07
TRAF7Q6Q0C0 AC048334.1-201ENST00000477975 159 ntBASIC2.09□□□□□ -2.07
TRAF7Q6Q0C0 Y_RNA.139-201ENST00000363464 102 ntBASIC2.08□□□□□ -2.08
TRAF7Q6Q0C0 Y_RNA.164-201ENST00000363709 102 ntBASIC2.08□□□□□ -2.08
TRAF7Q6Q0C0 RNU1-119P-201ENST00000391122 165 ntBASIC2.08□□□□□ -2.08
TRAF7Q6Q0C0 RNA5SP364-201ENST00000516938 78 ntBASIC2.08□□□□□ -2.08
TRAF7Q6Q0C0 AC012493.3-201ENST00000604494 112 ntBASIC2.08□□□□□ -2.08
TRAF7Q6Q0C0 AL157834.3-201ENST00000615543 103 ntBASIC2.08□□□□□ -2.08
TRAF7Q6Q0C0 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
TRAF7Q6Q0C0 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
TRAF7Q6Q0C0 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
TRAF7Q6Q0C0 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.07□□□□□ -2.08
TRAF7Q6Q0C0 MIR429-201ENST00000362106 83 ntBASIC2.07□□□□□ -2.08
TRAF7Q6Q0C0 AL591704.2-201ENST00000421658 181 ntBASIC2.07□□□□□ -2.08
TRAF7Q6Q0C0 SNORD13-201ENST00000459299 104 ntBASIC2.07□□□□□ -2.08
TRAF7Q6Q0C0 SNORD45.2-201ENST00000363552 72 ntBASIC2.06□□□□□ -2.08
TRAF7Q6Q0C0 RNU6-726P-201ENST00000364680 107 ntBASIC2.06□□□□□ -2.08
TRAF7Q6Q0C0 RNA5SP160-201ENST00000364866 120 ntBASIC2.06□□□□□ -2.08
TRAF7Q6Q0C0 RNA5SP190-201ENST00000365222 118 ntBASIC2.06□□□□□ -2.08
TRAF7Q6Q0C0 AC243829.6-201ENST00000612652 106 ntBASIC2.06□□□□□ -2.08
TRAF7Q6Q0C0 AC244669.1-204ENST00000621564 178 ntBASIC2.06□□□□□ -2.08
TRAF7Q6Q0C0 MIR644A-201ENST00000385262 94 ntBASIC2.05□□□□□ -2.08
TRAF7Q6Q0C0 MIR934-201ENST00000401241 83 ntBASIC2.05□□□□□ -2.08
TRAF7Q6Q0C0 RNA5SP484-201ENST00000458857 111 ntBASIC2.05□□□□□ -2.08
TRAF7Q6Q0C0 MIR548AE1-201ENST00000583292 70 ntBASIC2.05□□□□□ -2.08
TRAF7Q6Q0C0 AC084768.2-201ENST00000622736 221 ntBASIC2.05□□□□□ -2.08
TRAF7Q6Q0C0 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.05□□□□□ -2.08
TRAF7Q6Q0C0 SNORA7.1-201ENST00000363750 139 ntBASIC2.04□□□□□ -2.08
TRAF7Q6Q0C0 RNU6-717P-201ENST00000459076 104 ntBASIC2.04□□□□□ -2.08
TRAF7Q6Q0C0 RNU6-1053P-201ENST00000515930 101 ntBASIC2.04□□□□□ -2.08
TRAF7Q6Q0C0 MIR4255-201ENST00000579351 72 ntBASIC2.04□□□□□ -2.08
TRAF7Q6Q0C0 snoU13.31-201ENST00000607291 104 ntBASIC2.04□□□□□ -2.08
TRAF7Q6Q0C0 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.08
TRAF7Q6Q0C0 SNORA8.2-201ENST00000384372 139 ntBASIC2.03□□□□□ -2.08
TRAF7Q6Q0C0 SNORA80D-201ENST00000384488 135 ntBASIC2.03□□□□□ -2.08
TRAF7Q6Q0C0 SNORA75.2-201ENST00000391138 150 ntBASIC2.03□□□□□ -2.08
TRAF7Q6Q0C0 SNORA75.3-201ENST00000391231 150 ntBASIC2.03□□□□□ -2.08
TRAF7Q6Q0C0 RNU7-154P-201ENST00000516194 62 ntBASIC2.03□□□□□ -2.08
TRAF7Q6Q0C0 MIR8081-201ENST00000611533 95 ntBASIC2.03□□□□□ -2.08
TRAF7Q6Q0C0 SNORD115-25-201ENST00000362619 82 ntBASIC2.02□□□□□ -2.09
TRAF7Q6Q0C0 Y_RNA.407-201ENST00000383986 113 ntBASIC2.02□□□□□ -2.09
TRAF7Q6Q0C0 MIR548L-201ENST00000408303 86 ntBASIC2.02□□□□□ -2.09
TRAF7Q6Q0C0 RNU1-40P-201ENST00000516816 164 ntBASIC2.02□□□□□ -2.09
TRAF7Q6Q0C0 RNU1-97P-201ENST00000516872 164 ntBASIC2.02□□□□□ -2.09
TRAF7Q6Q0C0 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.02□□□□□ -2.09
TRAF7Q6Q0C0 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.02□□□□□ -2.09
TRAF7Q6Q0C0 MIR548AA1-201ENST00000384971 97 ntBASIC2.01□□□□□ -2.09
TRAF7Q6Q0C0 RNU6-1267P-201ENST00000410747 107 ntBASIC2.01□□□□□ -2.09
TRAF7Q6Q0C0 AC023827.1-201ENST00000569247 97 ntBASIC2.01□□□□□ -2.09
TRAF7Q6Q0C0 uc_338.20-201ENST00000621563 178 ntBASIC2.01□□□□□ -2.09
TRAF7Q6Q0C0 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
TRAF7Q6Q0C0 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
TRAF7Q6Q0C0 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
TRAF7Q6Q0C0 RNU6-337P-201ENST00000391243 106 ntBASIC2□□□□□ -2.09
TRAF7Q6Q0C0 RNU6-995P-201ENST00000391244 107 ntBASIC2□□□□□ -2.09
TRAF7Q6Q0C0 RNU4-62P-201ENST00000410125 130 ntBASIC2□□□□□ -2.09
TRAF7Q6Q0C0 RNU7-90P-201ENST00000459216 62 ntBASIC2□□□□□ -2.09
TRAF7Q6Q0C0 RNU6-1262P-201ENST00000516217 96 ntBASIC2□□□□□ -2.09
TRAF7Q6Q0C0 SNORA25.15-201ENST00000516487 89 ntBASIC2□□□□□ -2.09
TRAF7Q6Q0C0 MIR4639-201ENST00000584938 69 ntBASIC2□□□□□ -2.09
TRAF7Q6Q0C0 Y_RNA.226-201ENST00000364337 114 ntBASIC1.99□□□□□ -2.09
TRAF7Q6Q0C0 RNU6-716P-201ENST00000365621 103 ntBASIC1.99□□□□□ -2.09
TRAF7Q6Q0C0 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.99□□□□□ -2.09
TRAF7Q6Q0C0 MIR4303-201ENST00000581299 66 ntBASIC1.99□□□□□ -2.09
TRAF7Q6Q0C0 MIR4781-201ENST00000585250 76 ntBASIC1.99□□□□□ -2.09
TRAF7Q6Q0C0 MIR4317-201ENST00000637586 65 ntBASIC1.99□□□□□ -2.09
TRAF7Q6Q0C0 MIR378A-201ENST00000362177 66 ntBASIC1.98□□□□□ -2.09
TRAF7Q6Q0C0 RNU6-530P-201ENST00000391180 107 ntBASIC1.98□□□□□ -2.09
TRAF7Q6Q0C0 AP1B1P2-201ENST00000416196 106 ntBASIC1.98□□□□□ -2.09
TRAF7Q6Q0C0 RNU7-21P-201ENST00000459430 62 ntBASIC1.98□□□□□ -2.09
TRAF7Q6Q0C0 RNU6-1223P-201ENST00000517124 104 ntBASIC1.98□□□□□ -2.09
TRAF7Q6Q0C0 RNU6-910P-201ENST00000390844 107 ntBASIC1.97□□□□□ -2.09
TRAF7Q6Q0C0 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.97□□□□□ -2.09
TRAF7Q6Q0C0 MIR520F-201ENST00000384824 87 ntBASIC1.96□□□□□ -2.1
TRAF7Q6Q0C0 RNU6-321P-201ENST00000410912 106 ntBASIC1.96□□□□□ -2.1
TRAF7Q6Q0C0 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
TRAF7Q6Q0C0 Y_RNA.363-201ENST00000365529 113 ntBASIC1.95□□□□□ -2.1
TRAF7Q6Q0C0 MIR100-201ENST00000385259 80 ntBASIC1.95□□□□□ -2.1
TRAF7Q6Q0C0 MIR6507-201ENST00000613630 70 ntBASIC1.95□□□□□ -2.1
TRAF7Q6Q0C0 RMST_2.1-201ENST00000617263 136 ntBASIC1.95□□□□□ -2.1
TRAF7Q6Q0C0 MTRNR2L9-201ENST00000622562 75 ntBASIC1.95□□□□□ -2.1
TRAF7Q6Q0C0 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
TRAF7Q6Q0C0 RNU6-1047P-201ENST00000364418 107 ntBASIC1.94□□□□□ -2.1
TRAF7Q6Q0C0 AC002350.1-201ENST00000490759 375 ntBASIC1.94□□□□□ -2.1
TRAF7Q6Q0C0 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
TRAF7Q6Q0C0 SNORD79.1-201ENST00000516069 84 ntBASIC1.93□□□□□ -2.1
TRAF7Q6Q0C0 RNA5SP470-201ENST00000516463 106 ntBASIC1.93□□□□□ -2.1
TRAF7Q6Q0C0 RNU6-135P-201ENST00000516769 101 ntBASIC1.93□□□□□ -2.1
TRAF7Q6Q0C0 SNORA70.22-201ENST00000517160 124 ntBASIC1.93□□□□□ -2.1
TRAF7Q6Q0C0 RNA5SP47-201ENST00000517230 109 ntBASIC1.93□□□□□ -2.1
TRAF7Q6Q0C0 MIR4473-201ENST00000583731 91 ntBASIC1.93□□□□□ -2.1
TRAF7Q6Q0C0 MIR1-1-201ENST00000362147 71 ntBASIC1.92□□□□□ -2.1
TRAF7Q6Q0C0 SNORA67.5-201ENST00000391036 107 ntBASIC1.92□□□□□ -2.1
TRAF7Q6Q0C0 MIR548T-201ENST00000408369 74 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 353.4 ms