Protein–RNA interactions for Protein: Q12986

NFX1, Transcriptional repressor NF-X1, humanhuman

Known RBP Predictions only

Length 1,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1Q12986 MIR519A2-201ENST00000384990 87 ntBASIC1.95□□□□□ -2.1
NFX1Q12986 SCARNA17.3-201ENST00000516381 125 ntBASIC1.95□□□□□ -2.1
NFX1Q12986 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.95□□□□□ -2.1
NFX1Q12986 AL157834.3-201ENST00000615543 103 ntBASIC1.95□□□□□ -2.1
NFX1Q12986 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
NFX1Q12986 RNU6-1008P-201ENST00000384160 104 ntBASIC1.94□□□□□ -2.1
NFX1Q12986 MIR579-201ENST00000385221 98 ntBASIC1.94□□□□□ -2.1
NFX1Q12986 AL451105.1-201ENST00000450005 189 ntBASIC1.94□□□□□ -2.1
NFX1Q12986 RN7SKP88-201ENST00000516847 250 ntBASIC1.94□□□□□ -2.1
NFX1Q12986 MIR4285-201ENST00000581001 85 ntBASIC1.94□□□□□ -2.1
NFX1Q12986 7SK.8-201ENST00000612110 250 ntBASIC1.94□□□□□ -2.1
NFX1Q12986 AL136317.1-201ENST00000612653 226 ntBASIC1.94□□□□□ -2.1
NFX1Q12986 7SK.11-201ENST00000615477 250 ntBASIC1.94□□□□□ -2.1
NFX1Q12986 uc_338.20-201ENST00000621563 178 ntBASIC1.94□□□□□ -2.1
NFX1Q12986 7SK.13-201ENST00000622040 250 ntBASIC1.94□□□□□ -2.1
NFX1Q12986 U6.96-201ENST00000636425 70 ntBASIC1.94□□□□□ -2.1
NFX1Q12986 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
NFX1Q12986 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.94□□□□□ -2.1
NFX1Q12986 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.93□□□□□ -2.1
NFX1Q12986 MIR429-201ENST00000362106 83 ntBASIC1.93□□□□□ -2.1
NFX1Q12986 MIR548L-201ENST00000408303 86 ntBASIC1.93□□□□□ -2.1
NFX1Q12986 RNU6-165P-201ENST00000517170 99 ntBASIC1.93□□□□□ -2.1
NFX1Q12986 MIR502-201ENST00000606349 86 ntBASIC1.93□□□□□ -2.1
NFX1Q12986 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
NFX1Q12986 MIR329-2-201ENST00000385029 84 ntBASIC1.92□□□□□ -2.1
NFX1Q12986 AC023827.1-201ENST00000569247 97 ntBASIC1.92□□□□□ -2.1
NFX1Q12986 AC090617.8-201ENST00000623339 167 ntBASIC1.92□□□□□ -2.1
NFX1Q12986 MIR582-201ENST00000365731 98 ntBASIC1.91□□□□□ -2.1
NFX1Q12986 MIR548E-201ENST00000408287 88 ntBASIC1.91□□□□□ -2.1
NFX1Q12986 MIR548AG1-201ENST00000579932 66 ntBASIC1.91□□□□□ -2.1
NFX1Q12986 SNORA7.1-201ENST00000363750 139 ntBASIC1.9□□□□□ -2.11
NFX1Q12986 MIR652-201ENST00000385278 98 ntBASIC1.9□□□□□ -2.11
NFX1Q12986 SNORA75.2-201ENST00000391138 150 ntBASIC1.9□□□□□ -2.11
NFX1Q12986 SNORA75.3-201ENST00000391231 150 ntBASIC1.9□□□□□ -2.11
NFX1Q12986 MIR1255B2-201ENST00000408618 67 ntBASIC1.9□□□□□ -2.11
NFX1Q12986 RNU7-151P-201ENST00000516930 53 ntBASIC1.9□□□□□ -2.11
NFX1Q12986 MIR4419B-201ENST00000577260 68 ntBASIC1.9□□□□□ -2.11
NFX1Q12986 AC012493.3-201ENST00000604494 112 ntBASIC1.9□□□□□ -2.11
NFX1Q12986 AC244669.1-204ENST00000621564 178 ntBASIC1.9□□□□□ -2.11
NFX1Q12986 RNU6-135P-201ENST00000516769 101 ntBASIC1.89□□□□□ -2.11
NFX1Q12986 MIR4639-201ENST00000584938 69 ntBASIC1.89□□□□□ -2.11
NFX1Q12986 RNU6-828P-201ENST00000364876 107 ntBASIC1.88□□□□□ -2.11
NFX1Q12986 RNU6-133P-201ENST00000383989 107 ntBASIC1.88□□□□□ -2.11
NFX1Q12986 RNU6-458P-201ENST00000384179 107 ntBASIC1.88□□□□□ -2.11
NFX1Q12986 MIR499A-201ENST00000384903 122 ntBASIC1.88□□□□□ -2.11
NFX1Q12986 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.88□□□□□ -2.11
NFX1Q12986 U6.58-201ENST00000613107 107 ntBASIC1.88□□□□□ -2.11
NFX1Q12986 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
NFX1Q12986 RNU6-726P-201ENST00000364680 107 ntBASIC1.87□□□□□ -2.11
NFX1Q12986 RNU6-945P-201ENST00000383947 107 ntBASIC1.87□□□□□ -2.11
NFX1Q12986 Y_RNA.407-201ENST00000383986 113 ntBASIC1.87□□□□□ -2.11
NFX1Q12986 SNORA8.2-201ENST00000384372 139 ntBASIC1.87□□□□□ -2.11
NFX1Q12986 MIR516B1-201ENST00000385211 90 ntBASIC1.87□□□□□ -2.11
NFX1Q12986 MIR100-201ENST00000385259 80 ntBASIC1.87□□□□□ -2.11
NFX1Q12986 RNU4-62P-201ENST00000410125 130 ntBASIC1.87□□□□□ -2.11
NFX1Q12986 MIR4303-201ENST00000581299 66 ntBASIC1.87□□□□□ -2.11
NFX1Q12986 AC243829.3-201ENST00000622177 108 ntBASIC1.87□□□□□ -2.11
NFX1Q12986 MIR520F-201ENST00000384824 87 ntBASIC1.86□□□□□ -2.11
NFX1Q12986 MIR644A-201ENST00000385262 94 ntBASIC1.86□□□□□ -2.11
NFX1Q12986 MIR548H4-201ENST00000408689 111 ntBASIC1.86□□□□□ -2.11
NFX1Q12986 RNA5SP484-201ENST00000458857 111 ntBASIC1.86□□□□□ -2.11
NFX1Q12986 AC048334.1-201ENST00000477975 159 ntBASIC1.86□□□□□ -2.11
NFX1Q12986 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.86□□□□□ -2.11
NFX1Q12986 SNORD48-201ENST00000364953 64 ntBASIC1.85□□□□□ -2.11
NFX1Q12986 SNORA67.5-201ENST00000391036 107 ntBASIC1.85□□□□□ -2.11
NFX1Q12986 RNU6-321P-201ENST00000410912 106 ntBASIC1.84□□□□□ -2.11
NFX1Q12986 TRMT112P2-201ENST00000512910 132 ntBASIC1.84□□□□□ -2.11
NFX1Q12986 RNU7-154P-201ENST00000516194 62 ntBASIC1.84□□□□□ -2.11
NFX1Q12986 AC243829.6-201ENST00000612652 106 ntBASIC1.84□□□□□ -2.11
NFX1Q12986 MIR1-1-201ENST00000362147 71 ntBASIC1.83□□□□□ -2.12
NFX1Q12986 SNORD45.2-201ENST00000363552 72 ntBASIC1.83□□□□□ -2.12
NFX1Q12986 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
NFX1Q12986 RNU6-598P-201ENST00000364017 105 ntBASIC1.82□□□□□ -2.12
NFX1Q12986 RNU6-716P-201ENST00000365621 103 ntBASIC1.82□□□□□ -2.12
NFX1Q12986 MIR4255-201ENST00000579351 72 ntBASIC1.82□□□□□ -2.12
NFX1Q12986 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.82□□□□□ -2.12
NFX1Q12986 U2.18-201ENST00000622185 84 ntBASIC1.82□□□□□ -2.12
NFX1Q12986 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.82□□□□□ -2.12
NFX1Q12986 Y_RNA.363-201ENST00000365529 113 ntBASIC1.81□□□□□ -2.12
NFX1Q12986 MIR125B1-201ENST00000385236 88 ntBASIC1.81□□□□□ -2.12
NFX1Q12986 AP1B1P2-201ENST00000416196 106 ntBASIC1.81□□□□□ -2.12
NFX1Q12986 AC002350.1-201ENST00000490759 375 ntBASIC1.81□□□□□ -2.12
NFX1Q12986 RNU6-469P-201ENST00000516253 101 ntBASIC1.81□□□□□ -2.12
NFX1Q12986 MIR548AE1-201ENST00000583292 70 ntBASIC1.81□□□□□ -2.12
NFX1Q12986 MIR8070-201ENST00000616510 88 ntBASIC1.81□□□□□ -2.12
NFX1Q12986 Y_RNA.355-201ENST00000365462 98 ntBASIC1.8□□□□□ -2.12
NFX1Q12986 MIR29B1-201ENST00000385015 81 ntBASIC1.8□□□□□ -2.12
NFX1Q12986 RNU6-995P-201ENST00000391244 107 ntBASIC1.8□□□□□ -2.12
NFX1Q12986 SNORD115-25-201ENST00000362619 82 ntBASIC1.79□□□□□ -2.12
NFX1Q12986 Y_RNA.206-201ENST00000364136 102 ntBASIC1.79□□□□□ -2.12
NFX1Q12986 AL591704.2-201ENST00000421658 181 ntBASIC1.79□□□□□ -2.12
NFX1Q12986 SNORD53B-201ENST00000577887 78 ntBASIC1.79□□□□□ -2.12
NFX1Q12986 RNU1-42P-201ENST00000364033 160 ntBASIC1.78□□□□□ -2.12
NFX1Q12986 RNU7-21P-201ENST00000459430 62 ntBASIC1.78□□□□□ -2.12
NFX1Q12986 RNA5SP47-201ENST00000517230 109 ntBASIC1.78□□□□□ -2.12
NFX1Q12986 Y_RNA.139-201ENST00000363464 102 ntBASIC1.77□□□□□ -2.13
NFX1Q12986 snoU13.18-201ENST00000459483 104 ntBASIC1.77□□□□□ -2.13
NFX1Q12986 RMST_2.1-201ENST00000617263 136 ntBASIC1.77□□□□□ -2.13
NFX1Q12986 MIR548AA1-201ENST00000384971 97 ntBASIC1.76□□□□□ -2.13
NFX1Q12986 RNU6-1326P-201ENST00000391262 107 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms